Sgr015997 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr015997
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	LIM domain-containing protein PLIM2c-like
Location	tig00006406: 502803 .. 503772 (-)
RNA-Seq Expression	Sgr015997
Synteny	Sgr015997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAGCCAAGCCTTCAGAGAAGCAAAATGATCTGGTATGCTCCCGCTCTTTTCATTTTTCATAGGCTTAGAAAGCTGACCCCAATGCCCTTTTTTTTTTTTTTCAAGTCATGGTGTTTAAACTCTTTTAAATCATAATATGGTGTGCCTAATATGCTTAGTTTGGTGAAAAGGAACTGCCTAGGAATTCTGGTACCCGTTCCATAACGATTATGTTTCTAATTTTCGTTGTGCTTTCGAGTCTAGTGGTGATTTGAGAGCAGGAGGTTTCTTCTTAGTTTGAATCCCTATAATATTATTTTCTTCTCATTTCATATTGAAATAGTATGTCTTAGGCCTTGTGAATTAAACGCGACTTTAGAAATTTCAACCACGTGCTCTCCATGCAATTGCTGTAATTTTTACATAGCATTACAACTTTCAAAATCTTGGACAGGCAAGGGCCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCTGTTTGCTCAAAAACGGTTTATCCATTGGAGAAGGTCTGTAGTTCAGTTTTTTTTGTTTTATCATTGTTACTGGATTGTTGCCTGATTAAAACCTACAAGTTCTCAAAATTGTGGAAGAAAAACTCTACAGGATTTTCAAGATGATGAAAAAATATATATATGGTTAGGAAAATTGAACCTGCCATTTTTTTTTTGTTTCTAAACAGGTGACTCTGGAGGGGGAATGCTACCACAAAACATGCTTTAGATGTGCTCACGGTGGCTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGGTCAAAGGCAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAAGCCACCACCCCGCCTTCCGAATCTGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCTGAGGACCATGAAGTAGAGCAATCTTAA

mRNA sequence

ATGGCAACAGCCAAGCCTTCAGAGAAGCAAAATGATCTGGCAAGGGCCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCTGTTTGCTCAAAAACGGTTTATCCATTGGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAAACATGCTTTAGATGTGCTCACGGTGGCTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGGTCAAAGGCAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAAGCCACCACCCCGCCTTCCGAATCTGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCTGAGGACCATGAAGTAGAGCAATCTTAA

Coding sequence (CDS)

ATGGCAACAGCCAAGCCTTCAGAGAAGCAAAATGATCTGGCAAGGGCCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCTGTTTGCTCAAAAACGGTTTATCCATTGGAGAAGGTGACTCTGGAGGGGGAATGCTACCACAAAACATGCTTTAGATGTGCTCACGGTGGCTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAACTCTTCATGGTCAAAGGCAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAAGCCACCACCCCGCCTTCCGAATCTGCGGAAGAAGATGCCGAGCCTCAGCCTCAATCTGAGGACCATGAAGTAGAGCAATCTTAA

Protein sequence

MATAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSEDHEVEQS

Homology

[Close]

BLAST of Sgr015997 vs. NCBI nr
Match: XP_022147508.1 (LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 LIM domain-containing protein PLIM2c-like [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 5.9e-59
Identity = 115/128 (89.84%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 4   AKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGC 63
           +KPSEKQNDL RAPSKLSSMFSGTQDKC+VCSKTVYPLEKVTLEGECYHKTCFRCAHGGC
Sbjct: 79  SKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGC 138

Query: 64  NLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQS 123
           NLTHS+ AALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA+TPP E A+++AEPQ QS
Sbjct: 139 NLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQAQS 198

Query: 124 EDHEVEQS 132
           EDH+VEQS
Sbjct: 199 EDHDVEQS 206

[Close]

BLAST of Sgr015997 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 5   KPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCN 64
           KPSEKQ++L R PSKLSSMFSGTQDKCAVC+KTVYPLEKVTLEGECYHK CFRCAHGGC+
Sbjct: 79  KPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCH 138

Query: 65  LTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSE 124
           LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVL+AAANKK TTPP+E  EEDA+PQPQSE
Sbjct: 139 LTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHGEEDADPQPQSE 198

Query: 125 DHEVEQS 132
           +H VEQS
Sbjct: 199 EHAVEQS 205

[Close]

BLAST of Sgr015997 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           + KPSEKQ++L R PSKLSSMFSGTQDKCAVC+KTVYPLEKVTLEGECYHK CFRCAHGG
Sbjct: 78  STKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKNCFRCAHGG 137

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQ 122
           C+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVL+AAANKK TTPP+E  EEDA+PQPQ
Sbjct: 138 CHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPAEHGEEDADPQPQ 197

Query: 123 SEDHEVEQS 132
           SE+H VEQS
Sbjct: 198 SEEHAVEQS 206

[Close]

BLAST of Sgr015997 vs. NCBI nr
Match: XP_038906229.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           T+KPSEKQNDL+RAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHK CFRCAHGG
Sbjct: 105 TSKPSEKQNDLSRAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKNCFRCAHGG 164

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEE---DAEP 122
           C+LTHSSYAALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKATTPP E AEE   DAE 
Sbjct: 165 CHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPEPAEEEEGDAEA 224

Query: 123 QPQSEDHEVEQS 132
           QPQ+E+  VEQ+
Sbjct: 225 QPQAEEAAVEQT 236

[Close]

BLAST of Sgr015997 vs. NCBI nr
Match: XP_022980415.1 (LIM domain-containing protein PLIM2b-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 109/127 (85.83%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 5   KPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCN 64
           KPSEKQ++L R PSKLS+MFSGTQDKC+VC+KTVYPLEKVTLEGECYHK CFRCAHGGC+
Sbjct: 79  KPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCH 138

Query: 65  LTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSE 124
           LTH SYAALDGVLYCKHHF+QLFMVKGNYNHVL+AAANKK TTPP++ AEEDAE QPQSE
Sbjct: 139 LTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNTTPPADRAEEDAESQPQSE 198

Query: 125 DHEVEQS 132
           DH VEQS
Sbjct: 199 DHAVEQS 205

[Close]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.8e-42
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           TA  +EK ND  +AP++LSS FSGTQDKCA C KTVYPLEK+T+EGE YHKTCFRCAH G
Sbjct: 79  TAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSG 138

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATT---PPSESAEEDAEP 122
           C LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + +T     +E  E++A P
Sbjct: 139 CPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRSTAEEDKTEPKEDEANP 198

Query: 123 QPQ------SEDHE 128
             +      +E+HE
Sbjct: 199 TEEETSDAAAEEHE 212

[Close]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-38
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 12  DLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYA 71
           +L R PSK+SS+F GTQDKCA C KTVYPLEK+ +EGEC+HKTCFRCAHGGC LTHSSYA
Sbjct: 85  ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYA 144

Query: 72  ALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA----TTPPSESAEEDAEPQPQS 124
           +LD VLYC+HHF QLFM KGNY HVLQAA +++     T PP  + +   E + ++
Sbjct: 145 SLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTLPPEPTEDVAVEAKEEN 200

[Close]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-38
Identity = 86/141 (60.99%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 4   AKPSEKQND-LARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 63
           A  +EK ND L R PSKLSS FSGTQDKCA C KTVYPLEKVT+EGE YHKTCFRC H G
Sbjct: 78  AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSG 137

Query: 64  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK------ATTPPS------ 123
           C LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV QAAAN +        +PPS      
Sbjct: 138 CPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPD 197

Query: 124 ------ESAEEDAEPQPQSED 126
                 E+ E+DA P+   E+
Sbjct: 198 DTASIPEAKEDDAAPEAAGEE 218

[Close]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.2e-36
Identity = 67/111 (60.36%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           T KP+ + N   R PS+L+ MFSGTQDKCA C+KTVYP+EKVT+E +CYHK+CF+C+HGG
Sbjct: 84  TDKPTPELN---RTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 143

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESA 114
           C ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+AT   + +A
Sbjct: 144 CPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRATAAATAAA 191

[Close]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 12  DLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYA 71
           +LARAPSK+ S FSGTQDKCA C KTVYPLEK+TLEGE YHK+CF+C+HGGC LT SSYA
Sbjct: 86  ELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 145

Query: 72  ALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSEDHE 128
           AL+GVLYCK HF QLFM KG+YNH+ + + +++    P    EE   P P  E+ E
Sbjct: 146 ALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVL--PEVVPEEQPAPPPPDENRE 199

[Close]

BLAST of Sgr015997 vs. ExPASy TrEMBL
Match: A0A6J1D1H7 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016415 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59
Identity = 115/128 (89.84%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 4   AKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGC 63
           +KPSEKQNDL RAPSKLSSMFSGTQDKC+VCSKTVYPLEKVTLEGECYHKTCFRCAHGGC
Sbjct: 79  SKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGC 138

Query: 64  NLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQS 123
           NLTHS+ AALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA+TPP E A+++AEPQ QS
Sbjct: 139 NLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQAQS 198

Query: 124 EDHEVEQS 132
           EDH+VEQS
Sbjct: 199 EDHDVEQS 206

[Close]

BLAST of Sgr015997 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 109/127 (85.83%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 5   KPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCN 64
           KPSEKQ++L R PSKLS+MFSGTQDKC+VC+KTVYPLEKVTLEGECYHK CFRCAHGGC+
Sbjct: 79  KPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCH 138

Query: 65  LTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSE 124
           LTH SYAALDGVLYCKHHF+QLFMVKGNYNHVL+AAANKK TTPP++ AEEDAE QPQSE
Sbjct: 139 LTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNTTPPADRAEEDAESQPQSE 198

Query: 125 DHEVEQS 132
           DH VEQS
Sbjct: 199 DHAVEQS 205

[Close]

BLAST of Sgr015997 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 109/127 (85.83%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 5   KPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCN 64
           KPSEKQ++L R PSKLSSMFSGTQDKC+VC+KTVYPLEKVTLEGECYHK CFRCAHGGC+
Sbjct: 79  KPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCH 138

Query: 65  LTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQSE 124
           LTH SYAALDGVLYCKHHF+QLFMVKGNYNHVL+AAANKK  TPP++ AEEDAE QPQSE
Sbjct: 139 LTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNATPPADRAEEDAESQPQSE 198

Query: 125 DHEVEQS 132
           DH VEQS
Sbjct: 199 DHAVEQS 205

[Close]

BLAST of Sgr015997 vs. ExPASy TrEMBL
Match: A0A6J1D1C3 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016371 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.8e-56
Identity = 110/129 (85.27%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           T+KPSEKQNDL+RAPSKLSSMF GTQDKCAVC+KTVYPLEKVTLEGE YHKTCFRCAHGG
Sbjct: 78  TSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVTLEGESYHKTCFRCAHGG 137

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEEDAEPQPQ 122
           CNLTHS+ AALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA+TPP E A+E+AEP+ +
Sbjct: 138 CNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADEEAEPRTK 197

Query: 123 SEDHEVEQS 132
           +ED++VE+S
Sbjct: 198 AEDNDVEES 206

[Close]

BLAST of Sgr015997 vs. ExPASy TrEMBL
Match: A0A0A0L4A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.4e-55
Identity = 110/131 (83.97%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 4   AKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGC 63
           AKPSEKQNDL+RAPSKLSSMFSGTQDKCA CSKTVYPLEKVTLEGECYHK CFRCAHGGC
Sbjct: 79  AKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGC 138

Query: 64  NLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESAEED---AEPQ 123
           +LTHSSYAALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA TPP E AEE+    E Q
Sbjct: 139 HLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAPTPPPEPAEEEEGATEAQ 198

Query: 124 PQSEDHEVEQS 132
           PQ+++  VEQ+
Sbjct: 199 PQADEAPVEQT 209

[Close]

BLAST of Sgr015997 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 171.0 bits (432), Expect = 6.3e-43
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           TA  +EK ND  +AP++LSS FSGTQDKCA C KTVYPLEK+T+EGE YHKTCFRCAH G
Sbjct: 79  TAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTMEGESYHKTCFRCAHSG 138

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATT---PPSESAEEDAEP 122
           C LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + +T     +E  E++A P
Sbjct: 139 CPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRSTAEEDKTEPKEDEANP 198

Query: 123 QPQ------SEDHE 128
             +      +E+HE
Sbjct: 199 TEEETSDAAAEEHE 212

[Close]

BLAST of Sgr015997 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 159.1 bits (401), Expect = 2.5e-39
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 12  DLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSSYA 71
           +L R PSK+SS+F GTQDKCA C KTVYPLEK+ +EGEC+HKTCFRCAHGGC LTHSSYA
Sbjct: 85  ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYA 144

Query: 72  ALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA----TTPPSESAEEDAEPQPQS 124
           +LD VLYC+HHF QLFM KGNY HVLQAA +++     T PP  + +   E + ++
Sbjct: 145 SLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTLPPEPTEDVAVEAKEEN 200

[Close]

BLAST of Sgr015997 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-39
Identity = 86/141 (60.99%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 4   AKPSEKQND-LARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 63
           A  +EK ND L R PSKLSS FSGTQDKCA C KTVYPLEKVT+EGE YHKTCFRC H G
Sbjct: 78  AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSG 137

Query: 64  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK------ATTPPS------ 123
           C LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV QAAAN +        +PPS      
Sbjct: 138 CPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPD 197

Query: 124 ------ESAEEDAEPQPQSED 126
                 E+ E+DA P+   E+
Sbjct: 198 DTASIPEAKEDDAAPEAAGEE 218

[Close]

BLAST of Sgr015997 vs. TAIR 10
Match: AT2G45800.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-39
Identity = 86/141 (60.99%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 4   AKPSEKQND-LARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 63
           A  +EK ND L R PSKLSS FSGTQDKCA C KTVYPLEKVT+EGE YHKTCFRC H G
Sbjct: 47  AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSG 106

Query: 64  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK------ATTPPS------ 123
           C LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV QAAAN +        +PPS      
Sbjct: 107 CPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPD 166

Query: 124 ------ESAEEDAEPQPQSED 126
                 E+ E+DA P+   E+
Sbjct: 167 DTASIPEAKEDDAAPEAAGEE 187

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BLAST of Sgr015997 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-37
Identity = 67/111 (60.36%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 3   TAKPSEKQNDLARAPSKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKTCFRCAHGG 62
           T KP+ + N   R PS+L+ MFSGTQDKCA C+KTVYP+EKVT+E +CYHK+CF+C+HGG
Sbjct: 84  TDKPTPELN---RTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGG 143

Query: 63  CNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKATTPPSESA 114
           C ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+AT   + +A
Sbjct: 144 CPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRATAAATAAA 191

The following BLAST results are available for this feature:

BLAST of Sgr015997 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147508.1	5.9e-59	89.84	LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 ...	[more]
XP_038891791.1	1.9e-57	87.40	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_038891725.1	1.9e-57	86.05	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_038906229.1	4.2e-57	87.12	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_022980415.1	2.7e-56	85.83	LIM domain-containing protein PLIM2b-like [Cucurbita maxima]	[more]

BLAST of Sgr015997 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	8.8e-42	64.93	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q1ECF5	3.5e-38	63.79	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	4.5e-38	60.99	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
O04193	4.2e-36	60.36	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q7F9R9	1.4e-34	62.93	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Sgr015997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1H7	2.8e-59	89.84	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IW81	1.3e-56	85.83	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9W7	2.2e-56	85.83	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1D1C3	3.8e-56	85.27	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0L4A1	9.4e-55	83.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1	[more]

BLAST of Sgr015997 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	6.3e-43	64.93	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	2.5e-39	63.79	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	3.2e-39	60.99	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.2	3.2e-39	60.99	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.0e-37	60.36	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 30..82 e-value: 7.9E-13 score: 58.6
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 31..86 e-value: 6.0E-11 score: 42.4
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 29..89 score: 12.285999
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 25..95 e-value: 1.4E-19 score: 72.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..131
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 4..128
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 4..128
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 57..97
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 23..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr015997.1	Sgr015997.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding