Spg039311 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCAGAGTGCGAAGCAAAAAGGTATTTTCTTTCGTTTCCTTAACCTTTTTGTTGTGAACAAGCTGTCTGCATTTCTTTTTTTCACTTGCTTTCTTTTAGATACAAATAGTATTTTCTAAATTTTGTCCTGTTTGGTTCTTTTTAATTTAAATTTCAGAGGGGTAACTTACGAATTGATGCTGCGCTCGATGCTATGAACCCTTTTGGATTTCCCCCAAAGTTGGTTCGTCATACGGTGAAGGAGCTCCTTAGTGTAGGTCTTTCTGATTAATGTTCTTTCGTAAAATGTATACATACATGGTTCTTGTCTTTGTTTCGTTTTTGTGTGTGTTTCTGCTGTGGCTGCTGAAAGGTTTGTGGAAATATGGGTGGATTGGCTTTTTATGTAATAAAACAAGAAAGCCAATGTATTAATTCATCACTTTTCTTTCACTGAGTTAGGAGTTATGTCATTATTGCTGTTGATTGAAAATGTTTCATTCATTTCGTTTCTTCATTTTCATTTTGTTTTATACTCTCATACACTGCGGGGTGAATTTGCTTCAGGTCTATGGAGGAGACGATGGATGGGTATTCATCGAGGAAGGCTCTTATACTCTTTTGATCGATACCCTTCTCGAAAAACAGAAAGATGGTGCAATTGAGAAGGTTAGTTTTTCAACTATTTTTGTTGAATTTGGCTTGTACATGCACGCTTTCTTTAACTATGCATTATGGTTTATGGATCGTTCACGATACCAACAGAGAACCATTGTTGTTTGTTGTGTACAAGAAACTACTTGTTCTGTAGATTTAGTAAGCTATTATATCTTTCTTGAGTGGAAAGGTATGTATTCGAACCGGACTGTGTTGTATACAAATAAGAACCTAAATGCTTAGCTCCAAGAGAAACACCAAATCAAATTTTATTGGTGTTTGTGAGGTGCCCTTTTTCTTGTCTTAGTCAAATTGTTAGCTGTTATTATAGTATTACGTCGTGCATATAGATTTTGTTTCTCTTTTACTGTGTGTTTTTTTAGTCAAACTTTGGTTCATAATATTTCTATCGTTTGTGTCAACTGGGAAGCGTGTTTGTGGATCTATTGGCCTCTTATATTTCAGATTTTCAATGGAAAATTGCTGTTATCGTGTTGAACTGTACAGAGGACTAATTTTCCTCTGGCGAGCCCGTCATCCTATTTTTGAAGTCATGAGCGTTGGTTTTAATCTTTATCCCCTATGGTAGCAACAAGATTAAATAATTATCAGAAAAATGCCCACGTTGTATTCTTTCCAATGTTTTATTTCTTCAGTTTAGCGACTATTGAATGCCCATTTTCTGAAGGTTCCTGAAGAGAATGTAGGAGCAGATTGTCAGGCGACCCTTGTAGCTGGCTGTTCATCGAGTGTCATTGATGAAGCTTCCTCATCCAATCCAGGGGCTGAGATTACTGTGATGGACAATGGAGCTTTAAGGATCACATCCGCATTGCCTGCAAATGATTCAGGTAACTAGTTTCAGTTTTACATACCTGACCAAAGCTTACTTTTGTTATGGATTTTCATCATTCAGGGAACTAATTTCGTGTGTTTAGTCGTAAAGTTGACGATTGGTGCCTTAACCTTCATTCTTTTCTAGGCCAAACTAACTCCTAACCAGCTGAACTCTTAAACAATTATCTATGTGCAAAGTCTTGTTGCCAAAACTTAAGATAGAGAATAAATGGATTTAGGAGGTCAAGGAAGTCTATTTTCCAATAACGTTCGATTCGGTACCAAAGCATCGTTGAATAACAGCAATACTTTTTAAAGGCATTAATTGATTTCATTTGGTGACTTGGGAAAGAAACTGTCAAATGAATGGATTATTCTCACCTTGTGTGATTCCACTTACGTTGTGGATTATCATGCTGAAAGCACTGAAGGATGTTATCTCTGTTCATCTGCAGAAGAAAGATACGGGAAGGATGATGATGACCATGTTGGGAGTACTCTTAACCAGTCTTCACCGGCACGTACCCCAAAACCGAGTAGGCGAAGACCTTATCATGGCTGGATCTCTAACGGCGACATGGGAGATCTCGTGCGCTTAGCACCAGCTCCATTGCCTGAAGAGTTGGCCAAGTTATTCATTCTTCCTGCACAGAGAAAAAGAAAGCAGCGTTGGGATGTTAAGTCTGCAGACTCATGAGCTTTTATTTGGCTGGTTGTTTTGTCATTGGATTTTTGTGAATTGAGGGAAGATAGTAGAAATTGTGAATAGTAATTTTGTAATTGAGGGAAAAATGTCCCAGTCTTAGAACAAACTTCAAACTTCAAGAGCTAAGATGAAGCTTTTGAAAGTTCAGGGGTATAATTGAAATCTTCGACTCCAC ATGGCTCCCAGAGTGCGAAGCAAAAAGAGGGGTAACTTACGAATTGATGCTGCGCTCGATGCTATGAACCCTTTTGGATTTCCCCCAAAGTTGGTTCGTCATACGGTGAAGGAGCTCCTTAGTGTCTATGGAGGAGACGATGGATGGGTATTCATCGAGGAAGGCTCTTATACTCTTTTGATCGATACCCTTCTCGAAAAACAGAAAGATGGTGCAATTGAGAAGGTTAGTTTTTCAACTATTTTTGTTGAATTTGGCTTGTACATGCACGCTTTCTTTAACTATGCATTATGGTTTATGGATCGTTCACGATACCAACAGAGAACCATTGTTGTTTGTTGTGTACAAGAAACTACTTGTTCTGTAGATTTACGACTATTGAATGCCCATTTTCTGAAGGTTCCTGAAGAGAATGTAGGAGCAGATTGTCAGGCGACCCTTGTAGCTGGCTGTTCATCGAGTGTCATTGATGAAGCTTCCTCATCCAATCCAGGGGCTGAGATTACTGTGATGGACAATGGAGCTTTAAGGATCACATCCGCATTGCCTGCAAATGATTCAGAAGAAAGATACGGGAAGGATGATGATGACCATGTTGGGAGTACTCTTAACCAGTCTTCACCGGCACGTACCCCAAAACCGAGTAGGCGAAGACCTTATCATGGCTGGATCTCTAACGGCGACATGGGAGATCTCGTGCGCTTAGCACCAGCTCCATTGCCTGAAGAGTTGGCCAAGTTATTCATTCTTCCTGCACAGAGAAAAAGAAAGCAGCGTTGGGATGTTAAGTCTGCAGACTCATGA ATGGCTCCCAGAGTGCGAAGCAAAAAGAGGGGTAACTTACGAATTGATGCTGCGCTCGATGCTATGAACCCTTTTGGATTTCCCCCAAAGTTGGTTCGTCATACGGTGAAGGAGCTCCTTAGTGTCTATGGAGGAGACGATGGATGGGTATTCATCGAGGAAGGCTCTTATACTCTTTTGATCGATACCCTTCTCGAAAAACAGAAAGATGGTGCAATTGAGAAGGTTAGTTTTTCAACTATTTTTGTTGAATTTGGCTTGTACATGCACGCTTTCTTTAACTATGCATTATGGTTTATGGATCGTTCACGATACCAACAGAGAACCATTGTTGTTTGTTGTGTACAAGAAACTACTTGTTCTGTAGATTTACGACTATTGAATGCCCATTTTCTGAAGGTTCCTGAAGAGAATGTAGGAGCAGATTGTCAGGCGACCCTTGTAGCTGGCTGTTCATCGAGTGTCATTGATGAAGCTTCCTCATCCAATCCAGGGGCTGAGATTACTGTGATGGACAATGGAGCTTTAAGGATCACATCCGCATTGCCTGCAAATGATTCAGAAGAAAGATACGGGAAGGATGATGATGACCATGTTGGGAGTACTCTTAACCAGTCTTCACCGGCACGTACCCCAAAACCGAGTAGGCGAAGACCTTATCATGGCTGGATCTCTAACGGCGACATGGGAGATCTCGTGCGCTTAGCACCAGCTCCATTGCCTGAAGAGTTGGCCAAGTTATTCATTCTTCCTGCACAGAGAAAAAGAAAGCAGCGTTGGGATGTTAAGTCTGCAGACTCATGA MAPRVRSKKRGNLRIDAALDAMNPFGFPPKLVRHTVKELLSVYGGDDGWVFIEEGSYTLLIDTLLEKQKDGAIEKVSFSTIFVEFGLYMHAFFNYALWFMDRSRYQQRTIVVCCVQETTCSVDLRLLNAHFLKVPEENVGADCQATLVAGCSSSVIDEASSSNPGAEITVMDNGALRITSALPANDSEERYGKDDDDHVGSTLNQSSPARTPKPSRRRPYHGWISNGDMGDLVRLAPAPLPEELAKLFILPAQRKRKQRWDVKSADS Homology
BLAST of Spg039311 vs. NCBI nr
Match: XP_022953876.1 (uncharacterized protein LOC111456280 isoform X1 [Cucurbita moschata] >XP_022953883.1 uncharacterized protein LOC111456280 isoform X1 [Cucurbita moschata]) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-63 Identity = 152/288 (52.78%), Postives = 173/288 (60.07%), Query Frame = 0
BLAST of Spg039311 vs. NCBI nr
Match: XP_023531273.1 (uncharacterized protein LOC111793562 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.1 bits (640), Expect = 1.0e-62 Identity = 151/288 (52.43%), Postives = 172/288 (59.72%), Query Frame = 0
BLAST of Spg039311 vs. NCBI nr
Match: KAG7033305.1 (hypothetical protein SDJN02_07360 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-56 Identity = 141/278 (50.72%), Postives = 160/278 (57.55%), Query Frame = 0
BLAST of Spg039311 vs. NCBI nr
Match: XP_022990775.1 (uncharacterized protein LOC111487557 [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-55 Identity = 138/267 (51.69%), Postives = 157/267 (58.80%), Query Frame = 0
BLAST of Spg039311 vs. NCBI nr
Match: KAG6602621.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-55 Identity = 138/267 (51.69%), Postives = 157/267 (58.80%), Query Frame = 0
BLAST of Spg039311 vs. ExPASy TrEMBL
Match: A0A6J1GPA9 (uncharacterized protein LOC111456280 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456280 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63 Identity = 152/288 (52.78%), Postives = 173/288 (60.07%), Query Frame = 0
BLAST of Spg039311 vs. ExPASy TrEMBL
Match: A0A6J1JR10 (uncharacterized protein LOC111487557 OS=Cucurbita maxima OX=3661 GN=LOC111487557 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 6.0e-56 Identity = 138/267 (51.69%), Postives = 157/267 (58.80%), Query Frame = 0
BLAST of Spg039311 vs. ExPASy TrEMBL
Match: A0A6J1GQX1 (uncharacterized protein LOC111456280 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456280 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 7.8e-56 Identity = 138/267 (51.69%), Postives = 157/267 (58.80%), Query Frame = 0
BLAST of Spg039311 vs. ExPASy TrEMBL
Match: A0A1S3B3F8 (uncharacterized protein LOC103485563 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51 Identity = 135/278 (48.56%), Postives = 148/278 (53.24%), Query Frame = 0
BLAST of Spg039311 vs. ExPASy TrEMBL
Match: A0A6J1BY42 (uncharacterized protein LOC111006514 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006514 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 5.8e-51 Identity = 138/277 (49.82%), Postives = 155/277 (55.96%), Query Frame = 0
BLAST of Spg039311 vs. TAIR 10
Match: AT2G40020.3 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12 Identity = 80/269 (29.74%), Postives = 117/269 (43.49%), Query Frame = 0
BLAST of Spg039311 vs. TAIR 10
Match: AT2G40020.2 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Spg039311 vs. TAIR 10
Match: AT2G40020.1 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08 Identity = 72/257 (28.02%), Postives = 109/257 (42.41%), Query Frame = 0
BLAST of Spg039311 vs. TAIR 10
Match: AT1G45248.2 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05 Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Spg039311 vs. TAIR 10
Match: AT1G45248.3 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05 Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|