Spg038807 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038807
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AUGMIN subunit 8
Location	scaffold12: 966420 .. 967351 (-)
RNA-Seq Expression	Spg038807
Synteny	Spg038807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGGTGCTGTCCGTTGCCCAATGCCTCAAGAACTATGGTTGCTTCCTCACAATTGGTGTAGAAGAGAGCCCAACGGCTAAGAGGAAGCAGCCTTCCACGCCTCCTTCTCCGACGAGTCCATCAACTCGGGCCATGACTTATCTGCTGATTTAAGATTGTCTTCAAGAAGGACGGTGGGGGGTCGATTGGCAGAAAGTTTATGGCCTTTGACCATGCGGAGTTTGAGTGTCAATTTCCAGTCTAACATAATTTCTATTCATGTTAGTAAGAAGGAAAAACCAGTCCCTGTATCTCCATCTAATCGAACATTGAGGACGTCTTCAAATTTCGCTCACAGTCAGGTTGAAATGCCTATGGTTTCAAAGAAACCTACACCAGAGAGAAGAGAAATCCTCTTAAAGGAAAGAATGTGCCTGACCAATTGGAGAATTTTAAGCCAATTGATGGCTTGCATATACCCGGCTTGTAGATCAGCAGAGATGGCTGAGTAGACTTGGTGGGAAGGTATCATTAAATGCATTAAGTCGAAGTGTGGATCTTACTGATAAAATAATTCGGAATTCAGGTGGACCAGTTTCAGGAATTGGGTTATCTTCATTGAGGAGAACTTCATCTGATTCTATGAACAAACTTTTTCAGAAATCTAATAATGATTCTACGAGGATTATTCTTCCCCTTGATGATGGTCTTAGAATGGAAAATGGAAGAAATTCAGTTGACGATTGTCCATTGCAAGCATTAGGAATTCCAAAGTTGGCTTTTAATGGCTTGCTTGATAGGTTAAAATCAACACTTGCTATCAGATCTCAGTCGTTGCCATCACTTGGATCTCCTCTACCTTCACCAATTAAAACCTCAGTGCCATTATCCTCTGTTTCTAGAGAATCAAGTCCAGCCCGACCAAGACCATCAACTCCTCCTCCCTAG

mRNA sequence

ATGCCTCGGTGCTGTCCGTTGCCCAATGCCTCAAGAACTATGAAGGAAAAACCAGTCCCTGTATCTCCATCTAATCGAACATTGAGGACGTCTTCAAATTTCGCTCACAGTCAGGTTGAAATGCCTATGGTTTCAAAGAAACCTACACCAGAGAGAAGAGAAATCCTCTTAAAGGAAAGAATGTGCCTGACCAATTGGAGAATTTTAAGCCAATTGATGGCTTGCATATACCCGGCTTGTGGACCAGTTTCAGGAATTGGGTTATCTTCATTGAGGAGAACTTCATCTGATTCTATGAACAAACTTTTTCAGAAATCTAATAATGATTCTACGAGGATTATTCTTCCCCTTGATGATGGTCTTAGAATGGAAAATGGAAGAAATTCAGTTGACGATTGTCCATTGCAAGCATTAGGAATTCCAAAGTTGGCTTTTAATGGCTTGCTTGATAGGTTAAAATCAACACTTGCTATCAGATCTCAGTCGTTGCCATCACTTGGATCTCCTCTACCTTCACCAATTAAAACCTCAGTGCCATTATCCTCTGTTTCTAGAGAATCAAGTCCAGCCCGACCAAGACCATCAACTCCTCCTCCCTAG

Coding sequence (CDS)

ATGCCTCGGTGCTGTCCGTTGCCCAATGCCTCAAGAACTATGAAGGAAAAACCAGTCCCTGTATCTCCATCTAATCGAACATTGAGGACGTCTTCAAATTTCGCTCACAGTCAGGTTGAAATGCCTATGGTTTCAAAGAAACCTACACCAGAGAGAAGAGAAATCCTCTTAAAGGAAAGAATGTGCCTGACCAATTGGAGAATTTTAAGCCAATTGATGGCTTGCATATACCCGGCTTGTGGACCAGTTTCAGGAATTGGGTTATCTTCATTGAGGAGAACTTCATCTGATTCTATGAACAAACTTTTTCAGAAATCTAATAATGATTCTACGAGGATTATTCTTCCCCTTGATGATGGTCTTAGAATGGAAAATGGAAGAAATTCAGTTGACGATTGTCCATTGCAAGCATTAGGAATTCCAAAGTTGGCTTTTAATGGCTTGCTTGATAGGTTAAAATCAACACTTGCTATCAGATCTCAGTCGTTGCCATCACTTGGATCTCCTCTACCTTCACCAATTAAAACCTCAGTGCCATTATCCTCTGTTTCTAGAGAATCAAGTCCAGCCCGACCAAGACCATCAACTCCTCCTCCCTAG

Protein sequence

MPRCCPLPNASRTMKEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP

Homology

[Close]

BLAST of Spg038807 vs. NCBI nr
Match: XP_022999608.1 (AUGMIN subunit 8-like isoform X6 [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 6.4e-49
Identity = 130/217 (59.91%), Postives = 146/217 (67.28%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN------ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N      
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKLVETPMVSRKPTPERKRSPLKGKNVPDQLENSKPIDG 206

Query: 75  --WRILSQLMA---------------------CIYPACGPVSGIGLSSLRRTSSDSMNKL 134
              R++ Q  A                      I  + GP+ GIGL SLRRTSSDS+NKL
Sbjct: 207 LHTRLIDQRRASRIGRKISLNALSRSGDLTDKIIRSSPGPLPGIGLPSLRRTSSDSINKL 266

Query: 135 FQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQS 194
             +SNNDS++ ILPLDDGLRME+G NSVDDC LQA G P+LA NGL DRLKST A+RSQS
Sbjct: 267 LPRSNNDSSK-ILPLDDGLRMEDGTNSVDDCSLQAPGTPRLASNGLPDRLKSTPAVRSQS 326

Query: 195 LPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           L   G  LPSPI+TSVP SSVSR SSPARPRPSTPPP
Sbjct: 327 LTLPGLRLPSPIRTSVPSSSVSRGSSPARPRPSTPPP 362

[Close]

BLAST of Spg038807 vs. NCBI nr
Match: TYJ96402.1 (AUGMIN subunit 8 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 9.2e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. NCBI nr
Match: XP_008452644.1 (PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_008452652.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_008452661.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_008452669.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_008452678.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_016902122.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 9.2e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. NCBI nr
Match: KAA0056115.1 (AUGMIN subunit 8 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 9.2e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. NCBI nr
Match: XP_004144793.1 (AUGMIN subunit 8 [Cucumis sativus] >XP_011648899.1 AUGMIN subunit 8 [Cucumis sativus] >XP_011648900.1 AUGMIN subunit 8 [Cucumis sativus] >XP_031736817.1 AUGMIN subunit 8 [Cucumis sativus] >XP_031736818.1 AUGMIN subunit 8 [Cucumis sativus] >XP_031736819.1 AUGMIN subunit 8 [Cucumis sativus] >KGN61059.1 hypothetical protein Csa_021246 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-46
Identity = 124/218 (56.88%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  +E PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHIETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LM------------------------------ACIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHPRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLPGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND  + ILPLDDGLRME+  NSV+DC LQA GIP+LA N L DR K T A+RSQ
Sbjct: 267 LFQRSNNDCKK-ILPLDDGLRMEDESNSVEDCSLQASGIPRLASNSLPDRSKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL    S LPSPI+TSVP +SVSR SSP RPRPSTPPP
Sbjct: 327 SLTLPVSRLPSPIRTSVPSASVSRGSSPTRPRPSTPPP 363

[Close]

BLAST of Spg038807 vs. ExPASy TrEMBL
Match: A0A6J1KK70 (AUGMIN subunit 8-like isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111493922 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.1e-49
Identity = 130/217 (59.91%), Postives = 146/217 (67.28%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN------ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N      
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKLVETPMVSRKPTPERKRSPLKGKNVPDQLENSKPIDG 206

Query: 75  --WRILSQLMA---------------------CIYPACGPVSGIGLSSLRRTSSDSMNKL 134
              R++ Q  A                      I  + GP+ GIGL SLRRTSSDS+NKL
Sbjct: 207 LHTRLIDQRRASRIGRKISLNALSRSGDLTDKIIRSSPGPLPGIGLPSLRRTSSDSINKL 266

Query: 135 FQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQS 194
             +SNNDS++ ILPLDDGLRME+G NSVDDC LQA G P+LA NGL DRLKST A+RSQS
Sbjct: 267 LPRSNNDSSK-ILPLDDGLRMEDGTNSVDDCSLQAPGTPRLASNGLPDRLKSTPAVRSQS 326

Query: 195 LPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           L   G  LPSPI+TSVP SSVSR SSPARPRPSTPPP
Sbjct: 327 LTLPGLRLPSPIRTSVPSSSVSRGSSPARPRPSTPPP 362

[Close]

BLAST of Spg038807 vs. ExPASy TrEMBL
Match: A0A1S3BTT6 (AUGMIN subunit 8 OS=Cucumis melo OX=3656 GN=LOC103493600 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.5e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. ExPASy TrEMBL
Match: A0A5D3B959 (AUGMIN subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00290 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.5e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. ExPASy TrEMBL
Match: A0A5A7UR59 (Translation initiation factor IF-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00790 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.5e-48
Identity = 126/218 (57.80%), Postives = 143/218 (65.60%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHVETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LMA------------------------------CIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHTRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLVGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQ
Sbjct: 267 LFQRSNNDCTR-ILPLDDGLRMEGESNSVENCSLQASGIPRLASNGLPDRLKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL   GS LPSPI++S+P +SVSR SSP RPR STPPP
Sbjct: 327 SLTLPGSRLPSPIRSSMPSASVSRGSSPTRPRSSTPPP 363

[Close]

BLAST of Spg038807 vs. ExPASy TrEMBL
Match: A0A0A0LJ41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036080 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 6.5e-47
Identity = 124/218 (56.88%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQ 74
           KEKPVP SPS+RTLR SSNFAH  +E PMVS+KPTPER+   LK +     L N + +  
Sbjct: 147 KEKPVPASPSDRTLRPSSNFAHKHIETPMVSRKPTPERKRSPLKGKNVSDQLENSKPIDS 206

Query: 75  LM------------------------------ACIYPACGPVSGIGLSSLRRTSSDSMNK 134
           L                                 I  + GP+ GIGLSSLRRTSSDSMNK
Sbjct: 207 LHPRLVDQQRWPSRIGGKVSLNALSRSVDLTDKIIRSSSGPLPGIGLSSLRRTSSDSMNK 266

Query: 135 LFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQ 194
           LFQ+SNND  + ILPLDDGLRME+  NSV+DC LQA GIP+LA N L DR K T A+RSQ
Sbjct: 267 LFQRSNNDCKK-ILPLDDGLRMEDESNSVEDCSLQASGIPRLASNSLPDRSKPTPAVRSQ 326

Query: 195 SLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP 200
           SL    S LPSPI+TSVP +SVSR SSP RPRPSTPPP
Sbjct: 327 SLTLPVSRLPSPIRTSVPSASVSRGSSPTRPRPSTPPP 363

[Close]

BLAST of Spg038807 vs. TAIR 10
Match: AT4G30710.1 (Family of unknown function (DUF566) )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 64/215 (29.77%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLM 74
           KE+PV  S  +RTLR SSN A   + E   VS+KPTPER+   LK +        +S L 
Sbjct: 137 KERPVSSSSGDRTLRPSSNIAQKHKAETTSVSRKPTPERKRSPLKGK------NNVSDLS 196

Query: 75  ACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKSNNDS--------------TR 134
               P  GP S + +   R       + +S+S+N+     +  S               R
Sbjct: 197 ENSKPVDGPHSRL-IEQHRWPSRIGGKITSNSLNRSLDLGDKASRGIPTSGPGMGPSLRR 256

Query: 135 IILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLA 192
           + LPL    R              + +   S D+   +  G  +L   G LDR   +T  
Sbjct: 257 MSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSEDNNIARTSGAQRLLSAGSLDRATLATAV 316

[Close]

BLAST of Spg038807 vs. TAIR 10
Match: AT4G30710.2 (Family of unknown function (DUF566) )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 64/215 (29.77%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 15  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLM 74
           KE+PV  S  +RTLR SSN A   + E   VS+KPTPER+   LK +        +S L 
Sbjct: 137 KERPVSSSSGDRTLRPSSNIAQKHKAETTSVSRKPTPERKRSPLKGK------NNVSDLS 196

Query: 75  ACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKSNNDS--------------TR 134
               P  GP S + +   R       + +S+S+N+     +  S               R
Sbjct: 197 ENSKPVDGPHSRL-IEQHRWPSRIGGKITSNSLNRSLDLGDKASRGIPTSGPGMGPSLRR 256

Query: 135 IILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLA 192
           + LPL    R              + +   S D+   +  G  +L   G LDR   +T  
Sbjct: 257 MSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSEDNNIARTSGAQRLLSAGSLDRATLATAV 316

The following BLAST results are available for this feature:

BLAST of Spg038807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999608.1	6.4e-49	59.91	AUGMIN subunit 8-like isoform X6 [Cucurbita maxima]	[more]
TYJ96402.1	9.2e-48	57.80	AUGMIN subunit 8 [Cucumis melo var. makuwa]	[more]
XP_008452644.1	9.2e-48	57.80	PREDICTED: AUGMIN subunit 8 [Cucumis melo] >XP_008452652.1 PREDICTED: AUGMIN sub...	[more]
KAA0056115.1	9.2e-48	57.80	AUGMIN subunit 8 [Cucumis melo var. makuwa]	[more]
XP_004144793.1	1.3e-46	56.88	AUGMIN subunit 8 [Cucumis sativus] >XP_011648899.1 AUGMIN subunit 8 [Cucumis sat...	[more]

BLAST of Spg038807 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KK70	3.1e-49	59.91	AUGMIN subunit 8-like isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111493922 PE=...	[more]
A0A1S3BTT6	4.5e-48	57.80	AUGMIN subunit 8 OS=Cucumis melo OX=3656 GN=LOC103493600 PE=3 SV=1	[more]
A0A5D3B959	4.5e-48	57.80	AUGMIN subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002...	[more]
A0A5A7UR59	4.5e-48	57.80	Translation initiation factor IF-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0LJ41	6.5e-47	56.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036080 PE=3 SV=1	[more]

BLAST of Spg038807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30710.1	1.3e-04	29.77	Family of unknown function (DUF566)	[more]
AT4G30710.2	1.3e-04	29.77	Family of unknown function (DUF566)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..190
None	No IPR available	PANTHER	PTHR31807:SF37	AUGMIN SUBUNIT 8	coord: 13..60
None	No IPR available	PANTHER	PTHR31807	AUGMIN FAMILY MEMBER	coord: 13..60
None	No IPR available	PANTHER	PTHR31807:SF37	AUGMIN SUBUNIT 8	coord: 82..198
None	No IPR available	PANTHER	PTHR31807	AUGMIN FAMILY MEMBER	coord: 82..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038807.1	Spg038807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005488	binding