Spg036989 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036989
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chaperone protein DnaJ
Location	scaffold5: 27815430 .. 27819789 (-)
RNA-Seq Expression	Spg036989
Synteny	Spg036989

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGAGGCGAGGTGCCCAGGGGCCTATGCGCCTCGTAGGTAGCTGAGGCGAGTAGATTCAGTCAGGCGAGCGCCTTTGGTCGCCTGTCGCTTTTGTCGCCTGATTGAAGTTGCCGTTTGTGATCTCTTTTTTTATTATTATTTTTTTTTTATTTTTTATTTTAATTATGTTTAACATAACTTAAGAAACCCTAATAATAGCCCACCAAAAAAAAGCCCACGAAGGCCATGCAGAGAGGGACGCTTCAGCTATTGTTTATTGGGCAAGTTGAAGATAATGGCCAAAGAGGAGCAGTAGATGAGGCCTTAGATTTAGAAGGAGAGGAGGATGATGATTTTGACATTTAATGTTTTACTTTTGGCTTTTAGACTTTTAGTTTTTGTTCACTCTTAAGTCTTGTCTTCATGGTGTTTTGGAACTACTAGAAATTGATTCTTGTTTGATGTTTTGGCCATTATATGTTTTTACTATTCAATATTAATGTGTAAGGAGGATAAGAATTTGACACTTTATGTAATTATATTTTCTATAGAAATTTGTGCTCTATATATATATATTATTTATTTATGTTTCTATTTATTGTGCCTCGCTTCACTCGGGCGTCGCCTTTTTGTCGCCTCTCGCCTTGAGGCGATCAAGGGGCTTGTCGCCTTGAGGTGCGCCTTGCGCTTTGAAAACACTGATTGCGAATGGGCTATTTTGATAGAGAAGTGGAGGAGTGGTCCAATCTGTTTGCGCTCTTGGAGGAGGCTACATTGTCGTAAAGGGAGGATGTCTTGCTCTGGAAGTTGGAAGGTACAAGCTTGTTCTTGGTTTACTTAACTTTAGTAACTCTCCAAGAGAATAGAAGGGTGCTGGAGGAAGATATGCGCATTCAGATCTAGAATGGTAAAATTCCAAAGAGAGTGAAGTTCTTTTATGGACTTTGTCCCTTAATAGTATCAACATGTTGGACAAAGTTTAGAGGAGGTTTCCCAGCTCATGCATCTCCCCCAATGTAGGCTTCTTGTGTCTTAGAAGCAAGGAATTCGTTTCCCACCTTTTACTCCATTGTGATTTTGTTGCAAGCGTATGGATGAGATTTTCAGTTAGTAGGGCTGTAAACAAAAGCTGGTGGGAAGTTGGTTGTCTGGAGTCCTCTTAGGATGGTTCCTAAAAAATACCATCCTAAAAAATACAAGTGATGAAGCCGAATGTAATGAATAATCCTCAGAATTATATTATGCTTAAAACTAAAGGCTGCTAGCCTTTAAATAGACTTTACAAGGAGGCGGCCTGACTAACAGAATAACAAAATAAAAGAGGCACATGCCATACACATGGCCGAAGGGCTAACTAACCAAATGACTAATAACCGGCTACATCAACAAGGCTAGTGTTATGGATGAATATTGCAAGAGATATCCTCGGGCTCCTTTGGAAGGAAAGGAATTCTAGAGTTTTTTCAAACAAGAAATCTTTTTTTCTCCCTTTTGTGATTATGTACAACATATTGCCTCTACTTGGAGTGCCCAACACAAGGTTCTTTTGTAACTATTCCATTCATACCATCTCTTTAGATTGGAAGGTCTTTTTGTAATCCTTCATTTGGTAAGAGTGATGCCCTACCCTTTATCTCCTAGGTTGTTTTCTTGGCTGTGACTTTTGAATGAAGTTCTCTCTGTTTCTTATATAATTTTTTTTTCAATTGATTAGACTTTCATTCATTCAATACTTTGATCTATAAAGTGAGAAAGATGGAGAGTTGGAGTAGTCAGAACATATGTAGTTGGTATTTTCCCCGAGGGGAGAGGAACTATGAATGCAATTGGGCCAAATAAAGAGTTTTAACGCATCTTTGATACCAAACTAAGGGCGCTATAAGCAGTTAAATATAACAGTAGGGGTTGCCTTGAACTCTACTGTTGGCATTGCACTCATCTAAGTATAAATTGCGCAACACCAAGTAATACCTAGAGCATTCCAGGGTCAGATCCACGAGGAAGGGGAAGAATTAGTTCTAACGTGTTAAAAATGATTTAAACTAAGAGGCATGTAGGTGATCAATGTCTAAAATTAGGTAAGTGAATAGAGGCGGTACAAGTTGCGAAAATGTAAATAAAAACGCAATTGAAATATAGTTATCCATACAGATGCAGACAAAAACTAGTGAGGCGTTAGACATGAAAGTGAGACTCGACTTGGCTGCGGCTACCACATGCTGCCTTATACTATTATTTAGCTCACATGCATTGAATGATGCATACTTGTGAATTTATGTGGGAAATCAACATGCTCTGCCCTTCCGCTATAGTGCCTCGCACACAAGGCTAGTTATAATCCTAGGTGCTAACCTTGTTCATTTTACTCATTTCCCTCCTTACTTGCAAGTGGTTGGATTATTCCTAAAACAACCTAGCATGTTATATATCACACTCTTGCTCTACTTAAATATTTCTACATGCCCGACCCTTTTGGTGCCTAAACATGCTCTTACTTTTATCGGTTGGCTAAATAGATTGAAGCAATGAAAGAATAAGCACATTTAAGTAGAAGATTCAAGTACTTTCATTCAAACATGCTAGGAAAATATAGTTTAAGTTAACATGGGTGGCTTAGACGAACCCTTGAAAGGAAAATTAGCTCATGCTATAATACATATTTTCTGCTGCCTCAAACATAAACGTAAACATTGAATACAGAGGCTAAGGCATAAGAGAAGACAAAAGCTCTCTGACATGCAGAGCTTGCTTCAGGCCTTTAATGGAGAACTATCACTTCTCCAACTGCAAGGTTGAAGACGATGGAATGATAATGGGGGATTTTTCCTCCTTGTTTTGCTAGCCTCTTCATGTTTCACGAAGGGCGCTTTATATAGGCATGGGAAGACGAGGCAGGTTGGAGTCCACATCTAAGAAAACGTTGCTATCAATTAGGTATACGAGCACGCTGTGTTATGGTACCTGCCTGCACTTGCATTAGATGTTGGCCTAGAGCCTTCTACATTGTACGAATGCGCAGTCTGCTCCACTACCTTGCCTGACAACTTTTCAGGCGCTCTTATCCAAATGTCTCCCTCCTCATGCTGACTTTGAGGCACCTTTGACTTTCCTACAATGTTGCGCATTAGAAACATAGGTGGAGAGGCAATAGAAATAATTTAATGAGGTTCAATGAGGGTTTTCCATGTGTAGCAGGTCTCAACTCATTGCTTGGAACTCCTAGCAGATGGGAACTCCATCTCCGGCTTCTTGCAAACTTTTCTTTATAGGGATCTATCTCCTTGCCTGGACAAAGTTGCTCTGGTACCAATAAGTACAAAGTAAATTAGAAATTTTGTTCATTCTAGGATGAATTCCCCGACTACAGAAAACATGGTTATTTGATAGGGACTTTGATTAGAAGGATTTTTGAAGATAAGCCTTCTTATTTTGTTTTTTTAATGGGATTGTGTACAACGTAATGCTTTGTACAACTTAATTCTTTGGGCGGGACTTTGATAACTGCCAGCTAACTGTGAGTTAAAAGAAATCGACAGTATTGAATTGGCCAACCAACCTGTAGGTAACTCATCGCTAACTAGTGGAATACTCATAGCAGCAATACTTCTCTTGTCTTGTTACATCCTTGGAGGATCTTTCCTTTCCAATTGTATAGAAAATTGAAATTAAGAAGTTTTGTATTTTCTGCCTCAGTCGTAAGAACTCTCGATGTAGGGCAATGGGCATTTACTTTGTATTTGATTATTGAGATGACCTCTATTGCACAATGTCCCAAATGATTACCCCCTTTTTCGTTTTTATTTTTAACAGTACCATCCAGATATGAACAAGAATCCTGGATCTGAAGAGAAGTTCAAACAGATAAGTGCTGCATATGAGGTGAGAACCAAGACTCCCATTTGAGCATCGGTTTCTTGTGCTATTTTGTACATTTCATCTTCTTTAACCATTTCATGGATACTCCAACTGATGTCTTTCAAGACTCCATAAGTGTTGCATGTCTCGTCTTTCAACTTGTTCATCATGTTCCTTCTTCATATTTAGGAGATGGATATTTGGTTTCTATTTTACTGTCTCCTTTTCAAAAAGATATTTAGTTTCTCATCCCTGATATATAGGAGATAGATATTTTATTGTTCCATTCTAATATGTTTTTTCTTTTCTTTTTTCTTTTCCTTATAGATGTATAGTTGTTCCTTCCTGATTTGTAAATATGTAATAATGTTTTCAACTCATTTTTGTTATTGAAGAAAACAGTTCAACTAATATTCTTCATTATCTAATAATGATCCACTAGCAGCTTCACTATAGTGTTTTATTTGGAATTTTGGCTGAAGGAGTGTATGAGACACTAGCGGAAGCAATTTGGATCTAG

mRNA sequence

ATGGCGAGAGGCGAGGGGCTTGTCGCCTTGAGGTGCGCCTTGCGCTTTGAAAACACTGATTGCGAATGGGCTATTTTGATAGAGAAGTGGAGGAGTGGTCCAATCTGTTTGCGCTCTTGGAGGAGGCTACATTGTCGTAAAGGGAGGATGTCTTGCTCTGGAAGTTGGAAGGTATACGAGCACGCTGTGTTATGGTACCTGCCTGCACTTGCATTAGATGTTGGCCTAGAGCCTTCTACATTGTACGAATGCGCAGTCTCAACTCATTGCTTGGAACTCCTAGCAGATGGGAACTCCATCTCCGGCTTCTTGCAAACTTTTCTTTATAGGGATCTATCTCCTTGCCTGGACAAAGTTGCTCTGTACCATCCAGATATGAACAAGAATCCTGGATCTGAAGAGAAGTTCAAACAGATAAGTGCTGCATATGAGCAGCTTCACTATAGTGTTTTATTTGGAATTTTGGCTGAAGGAGTGTATGAGACACTAGCGGAAGCAATTTGGATCTAG

Coding sequence (CDS)

ATGGCGAGAGGCGAGGGGCTTGTCGCCTTGAGGTGCGCCTTGCGCTTTGAAAACACTGATTGCGAATGGGCTATTTTGATAGAGAAGTGGAGGAGTGGTCCAATCTGTTTGCGCTCTTGGAGGAGGCTACATTGTCGTAAAGGGAGGATGTCTTGCTCTGGAAGTTGGAAGGTATACGAGCACGCTGTGTTATGGTACCTGCCTGCACTTGCATTAGATGTTGGCCTAGAGCCTTCTACATTGTACGAATGCGCAGTCTCAACTCATTGCTTGGAACTCCTAGCAGATGGGAACTCCATCTCCGGCTTCTTGCAAACTTTTCTTTATAGGGATCTATCTCCTTGCCTGGACAAAGTTGCTCTGTACCATCCAGATATGAACAAGAATCCTGGATCTGAAGAGAAGTTCAAACAGATAAGTGCTGCATATGAGCAGCTTCACTATAGTGTTTTATTTGGAATTTTGGCTGAAGGAGTGTATGAGACACTAGCGGAAGCAATTTGGATCTAG

Protein sequence

MARGEGLVALRCALRFENTDCEWAILIEKWRSGPICLRSWRRLHCRKGRMSCSGSWKVYEHAVLWYLPALALDVGLEPSTLYECAVSTHCLELLADGNSISGFLQTFLYRDLSPCLDKVALYHPDMNKNPGSEEKFKQISAAYEQLHYSVLFGILAEGVYETLAEAIWI

Homology

[Close]

BLAST of Spg036989 vs. NCBI nr
Match: CAF1933503.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-04
Identity = 29/52 (55.77%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 95  ADGNSISGFLQTFLYRDLSPCLDKVALYHPDMNKNPGSEEKFKQISAAYEQL 147
           + G S S  L   L+     C   V  YHPDMNKNPG+E+KFKQISAAYE L
Sbjct: 265 SQGYSSSFILLFTLFFGFESCDLGVKQYHPDMNKNPGAEDKFKQISAAYEVL 316

[Close]

BLAST of Spg036989 vs. ExPASy Swiss-Prot
Match: Q9SJZ7 (Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJA6 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 49  RMSCSGSWK--VYEHAVLWYLPALALDVGLEPSTLYECAVSTHCLELLADGNSISGFLQT 108
           +++C G+ K  ++ H  L +L    +   + P        S   +   AD  S+ G  + 
Sbjct: 41  QVNCLGASKSSMFSHGSLPFLSMTGMSRNMHPPR----RGSRFTVRADADYYSVLGVSKN 100

Query: 109 FLYRDLSPCLDKVAL-YHPDMNKNPGSEEKFKQISAAYEQL 147
               ++     K+A  YHPD+NK+PG+EEKFK+IS AYE L
Sbjct: 101 ATKAEIKSAYRKLARNYHPDVNKDPGAEEKFKEISNAYEVL 137

[Close]

BLAST of Spg036989 vs. ExPASy Swiss-Prot
Match: P0CW07 (Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 96  DGNSISGFLQTFLYRDLSPCLDKVAL-YHPDMNKNPGSEEKFKQISAAYEQL 147
           D   I G  +     D+     K+AL YHPD NK PG+EEKFK+IS AY  L
Sbjct: 6   DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVL 57

[Close]

BLAST of Spg036989 vs. ExPASy Swiss-Prot
Match: P0CW06 (Chaperone protein DnaJ OS=Methanosarcina mazei OX=2209 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 96  DGNSISGFLQTFLYRDLSPCLDKVAL-YHPDMNKNPGSEEKFKQISAAYEQL 147
           D   I G  +     D+     K+AL YHPD NK PG+EEKFK+IS AY  L
Sbjct: 6   DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVL 57

[Close]

BLAST of Spg036989 vs. ExPASy Swiss-Prot
Match: Q84BU3 (Chaperone protein DnaJ OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) OX=272621 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 110 RDLSPCLDKVA-LYHPDMNKNPGSEEKFKQISAAYEQLH 148
           +++S    K+A  YHPD+N  PG+EEK+KQ++ AYE LH
Sbjct: 19  QEISKAYRKLAKKYHPDLNHEPGAEEKYKQVNEAYEVLH 57

[Close]

BLAST of Spg036989 vs. ExPASy Swiss-Prot
Match: Q9UXR9 (Chaperone protein DnaJ OS=Methanosarcina thermophila OX=2210 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 96  DGNSISGFLQTFLYRDLSPCLDKVAL-YHPDMNKNPGSEEKFKQISAAYEQL 147
           D   I G  +     D+     K+AL YHPD NK PG+EEKFK+IS AY  L
Sbjct: 6   DYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVL 57

[Close]

BLAST of Spg036989 vs. ExPASy TrEMBL
Match: A0A0K9NSB9 (Putative Chaperone protein DNAj OS=Zostera marina OX=29655 GN=ZOSMA_66G00710 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.5e-04
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 89  HCLELLADGNSISGFLQTFLYRDLSPCLDKVALYHPDMNKNPGSEEKFKQISAAYEQL 147
           H   L  D N+  G +++  YR+L+        YHPDMNKNPG+EEKFK+ISAAYE L
Sbjct: 93  HYATLNLDRNATLGEIKS-SYRNLA------RKYHPDMNKNPGAEEKFKEISAAYEVL 143

[Close]

BLAST of Spg036989 vs. TAIR 10
Match: AT2G22360.1 (DNAJ heat shock family protein )

HSP 1 Score: 51.6 bits (122), Expect = 7.2e-07
Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 49  RMSCSGSWK--VYEHAVLWYLPALALDVGLEPSTLYECAVSTHCLELLADGNSISGFLQT 108
           +++C G+ K  ++ H  L +L    +   + P        S   +   AD  S+ G  + 
Sbjct: 41  QVNCLGASKSSMFSHGSLPFLSMTGMSRNMHPPR----RGSRFTVRADADYYSVLGVSKN 100

Query: 109 FLYRDLSPCLDKVAL-YHPDMNKNPGSEEKFKQISAAYEQL 147
               ++     K+A  YHPD+NK+PG+EEKFK+IS AYE L
Sbjct: 101 ATKAEIKSAYRKLARNYHPDVNKDPGAEEKFKEISNAYEVL 137

[Close]

BLAST of Spg036989 vs. TAIR 10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 51.6 bits (122), Expect = 7.2e-07
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0


Query: 122 YHPDMNKNPGSEEKFKQISAAYEQL 147
           YHPDMNKNPG+E+KFKQISAAYE L
Sbjct: 90  YHPDMNKNPGAEDKFKQISAAYEVL 114

[Close]

BLAST of Spg036989 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 122 YHPDMNKNPGSEEKFKQISAAYEQL 147
           YHPD+NK PG+ EKFK+ISAAYE L
Sbjct: 102 YHPDVNKEPGATEKFKEISAAYEVL 126

[Close]

BLAST of Spg036989 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 122 YHPDMNKNPGSEEKFKQISAAYEQL 147
           YHPD+NK PG+ EKFK+ISAAYE L
Sbjct: 102 YHPDVNKEPGATEKFKEISAAYEVL 126

[Close]

BLAST of Spg036989 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 122 YHPDMNKNPGSEEKFKQISAAYEQL 147
           YHPD+NK PG+ EKFK+ISAAYE L
Sbjct: 102 YHPDVNKEPGATEKFKEISAAYEVL 126

The following BLAST results are available for this feature:

BLAST of Spg036989 vs. NCBI nr


Match Name	E-value	Identity	Description
CAF1933503.1	3.1e-04	55.77	unnamed protein product [Brassica napus]	[more]

BLAST of Spg036989 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJZ7	1.0e-05	32.67	Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJA6...	[more]
P0CW07	2.5e-04	48.08	Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 /...	[more]
P0CW06	2.5e-04	48.08	Chaperone protein DnaJ OS=Methanosarcina mazei OX=2209 GN=dnaJ PE=3 SV=1	[more]
Q84BU3	3.2e-04	51.28	Chaperone protein DnaJ OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 ...	[more]
Q9UXR9	3.2e-04	48.08	Chaperone protein DnaJ OS=Methanosarcina thermophila OX=2210 GN=dnaJ PE=3 SV=1	[more]

BLAST of Spg036989 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0K9NSB9	7.5e-04	51.72	Putative Chaperone protein DNAj OS=Zostera marina OX=29655 GN=ZOSMA_66G00710 PE=...	[more]

BLAST of Spg036989 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22360.1	7.2e-07	32.67	DNAJ heat shock family protein	[more]
AT3G17830.1	7.2e-07	88.00	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.1	5.1e-05	76.00	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.3	5.1e-05	76.00	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.2	5.1e-05	76.00	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 109..150 e-value: 1.8E-7 score: 33.0
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 119..147
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 119..147 e-value: 2.5E-7 score: 30.7
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 89..164 score: 8.551165
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 109..146 e-value: 2.0515E-8 score: 46.3845

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036989.1	Spg036989.1	mRNA