Spg035200 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035200
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase
Location	scaffold4: 24603426 .. 24614838 (-)
RNA-Seq Expression	Spg035200
Synteny	Spg035200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGTATCAGAAGCTCTATTTGGTATGGTTGGAAATCTTATTTAATTTCCTACAATGTTCATGAAGCATTCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTTAGGCGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTATGTTGTCTGTGTTCGGGGAGTTCTGGACAAATTGGTTGAGAATCTCATTTTCATTTCTTTAGATAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGATTGTTGGAAGTTGTGGTGTAGAATCTGGAAATCTGAAAAGTAGAATGTGAATGTGATTCTGAATCCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTGTGAGTGACAAAATGAATTTCGAAAATTATTTCCAACGGTTGTTCATGTTTAGATGTTTTACATGCTTTTCTATGAGTGATAGATGGTTTTTATGAATGGTTTCAAGCTTAAGTTATGAGCTTAGATTTTCTAATGAGGTTTATAAATGAGCACGTGATTATCGAGTTTCTGAAAATTAGTTGAAACGACATCCTTTTAAGCCAAGCATGTATTAGCAAGAATTATTTAAAGATTTTCGGTTTTTCTTCCACGAGCAAGCTGAGTAAGCTTGGGTTTTATGAAAGATAACGATAAGCAGACATGTTTAAACGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTCATTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCCCCACTACGACAAAGACGGTGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAATGTTTGATGTACTTGATATGTCTTGCTAGATTTTTAATGACGAGCCTGCGATGTTTTTAAGAAAGCTTTTATCGTTGTACGTTTATGTTTAACGCCTTGGTTGAGCATCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTTCGAATGTACAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACTCTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCTATATTGTAAATGTTTTGTAAGGATTGGACAATTTAGTCCTAGAGGTCGTGGTTGTATAAACCCCATTTGTATATGTTTTTGGTTGTGAAATCTATATCAGGTAATTTTCCAAATCGAGTTATGTCAGGGCTGCACCTCGTGTATATTATAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTTCATGTGGAATGTTTTATATCTAAGATTAGTATGTTTATCGGGTTCTACGTTTCAGAAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGACTAAGCTAGCCGGTGGTCTGGGAGGGGGTGTGACAACTTGGTATCAGAGTAGTTAGCGCCATGGGAAAAGAGACATGGTAGTTAGTGCTAAGAAAAATCCAGGAAGTAAGTAGTTAGGCGTTGGGTCAGTTCCGATAGAACTAGTAGAGTACGGTCCAAGTATTGTTGAGAGTGAGTCTAGTCAAGACTAGAATGTGCGTAGAAGTTTAGTATCATGCATTTGAGTTAAGTATCTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTACCAGCAGGCGACGCAGGCAGAATCAGGACGAGACGTAGGATCCTACCCAGAGTCAGTCTGAAAGGGGATCCAGTATCCCGAGAGGTCAGAATGAGGCAGGGAGTGAGCGATTTGCAAGATCTGCACAGGAGATCGGTAGGCCAGAGAAAGCAGGGCCTAGTGATCTGGAAAAGATGTACGGGATTGAACGGTTGAAGAAGTTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCCAACTGACGTCGAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTGAGTTGTCCTGAGGAGCGAAAAGTCAGATTAGCCACATTTCTTTTGCAGAAGGAGGCGGAGGGGTAGTGGAAATCCATTTTAGCCAGGCGCAGTGATGCACGTACGTTGGACTGGCAAACATTCAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCACTTTCAGTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCAATGTGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTGCATTTTGAGATACGTACCCCAGTTACTGTTATTGCCAAGTGGACGAATTTTTCCCAGCTAGTAGAGATTGCCTTACGTGTGGAGCAGAATATTATAGAGGAAAAGTCGGCTACGGAGACTAGTCGTGGAGCTCCAACAGCTAGTGGTTTTCTGAGGTCGTGAGCAACGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAATCATCGAAGCAGATGAGTTCGGGTAGTGCCTATCAGAGGCAGAGTCAGAGAGCCCCCAGTTAGTCCGCGAGTTCAGTAGCAAGACCGCGGACGGGTCAGGAGTCCGTTGCTAGTGAATTCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCGGGGTCAGTGTTTTGTTGGCGCCGGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGTCCACAGCTGAGAGCAGCAGCTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAGTCTTAGCAGGCGTAGGAGAAGGCACCAGTGGTGTAAGGCAGAAGGGAGTTGTAAGGAGACCTAGGCAGCAGGGAAAAGTCTATGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATTACTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGCGCTACGCATTCCTTTGTTTCTAGTATGTTCTTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACGTTGTATTAGTCAATGAAGTGTTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGGATTTCCTATTCACTCACTATGCTTCTATGGTTGCCATAAGAAAGAAGTGACTTTTAGGACACTAGGTTTGACTGAAGTAGTTTTTAGAGGTAAGAGGAAGATTATTCCTACGAGTTTGATTTCAGCTCTGAAAGCTGAGAAGTTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACAAGTAGTAAAGGTGCAAGAAGAAAAGCTGAAACCATAAGATGTTCCTGTGGTGAACGAATTTCTTGATGTTTTTCCAGCTGATTTATCGGGTTTGCCATCTGATAGAGAGGTGGAGTTCACTATTGAATTGATACCAGGAACAACACCTATTTCACAGGCACCATACAGAATGGCTCCGAGCGAGCTTAAGGAGCTGAAGGTGCAGTTGCAAGAACTAGTTGAGAATGGATACATCAGGCCTAGTGTGTCACCTTGGGGAGCTCCAGAGTTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACAATACGTAACAAGTATCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAGGGGAGCAGCAGTGTTCTCTAAGATTGATTTGAGGTCAGGATATCACCAGTTGAAGGTTAGGGAATCAGATATTCTTAAGACAGCATTTAGGACGAGGTATGGGCACTATGAGTTTTTAGTGATGCCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGACCTCATGAACAGGATCTTCCAGCAGTTTTCATGGACCTCTAAGATTCCATCTTGTGTTGTCATGTCCCCAGCCCCCCATTCGGTCTTGTCCCGAAGAAGGTAGGCTTATTGAGTCGGCGTGCAGGCCACTCTCACCCATACTAATCAAAGGACAATCCCTCGTGAGAAGGAGTTCATGACACACTCAGGATTAAGACTGAGTTACCTAGGTCATCCTATTGAAACAGTAACCTAACTAGTTAACGGTGTTACAACTAATGGTTGACTATTTCATGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTGTATCGAATACAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCCCCGTATGTCCCCACATACTAGTTCAAGTCACATGTAAACAACCTTGGATCTTAGTTTATTAGATTTGGGTCAAACTGTGCAATATTTAACAATAACACTTTTTTGTAGAAACTCAATAACACTTTATTGAAAACAAGTATACAATTTGCTTACATTCACTATCTATGAGTTTTAGGGCATAAAACCCAACAAACTCCCACTTGAACTAAAACTCTAGTTTAGTGGGATGTACAATAATCTATACAGCAGCGGGTGTATAATATACATGTATAAAACATATACAATGTACAAATACAATAAACTAGGGCATCACTATACCCATTACATTTCTCCCACTTGCCCTAGATTTCATCTTTGTACATTACTCGTAGATCTAGACCTTCTAGATGACCCTCAAACACTTTAGCCGAGAGAGTCTTTGTAAATGAATCAGCAATATTTCATTCAATTTAATGTGCCTCCTTGTCTTGGGCTGCGATGTTCTTTTGAATTTGCCACAACACCACTATATCACTATAAAGTGTGATGGGCAAGTTCACATTTGGAACACATTCCAAATCAATCAAGTACTTCCTAAGTCATACAGTCTCTATCGCTGCTTCACAAGCAGCTATGTAGATTTCCTCAAATCCTTATCAGTCTTAAAATCCGTGTCAGTGTATCCTGTAAGGATCAAATCCTTAGTCTCATACACGAGCATATGGTTCCTCTTTCTCCTCAGATACTTGAGGATATTCTTAACGGTTTTCCAGTGATCAAATCTTTGATTAGATTGATACTTACTGACCATCCCTACTGCATAGGGCATTCGTCTAATGAGTGATCTTCAGGTTGTTTGGACGACACATGGTCCAAACTTTGCTCTATTTGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGATATCTTTAGGTGGTTTGGACAAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACGCAAAGTTCAGCCCTATGAGAGGTCTTCTGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCCCTTTGAGTTTTGGAGAGTTTGGAACACAAAGTTCGGTCACATGAGATATCTTTAGCTGGTTTCGTCGAACAAGGTCAAAACTTTGCTCCGTTTGAGTCTTCGAGAGTTTTGAACACAAAGTTCGCCCTAATGAGTGGTCTTCAGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCTGTTTGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACAAAGTTCAGCCCTATTAGAGGTCTTCTGGTGGTTTGGACGACACATGGTCTAAACTTTGCTCCCTTTGAGTTTTGGAGAGTTTGAAACACAAAGTTTGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGACCAAACGTTGCTCCGTTTGAGTTTTCGGGAGTTTGGAACACAAAGTTCGGCACAAGGAGACGACTTCAGGTGGTTTGGACGACACATGGTCCAAACTGTGCTCCGTTGGAGTTTTGGAGATTTTGGAACACAACGTTCGGACCAATGAGATATCTTTAGGTAGATTGGACGAAGATGGTCAAAACTTTACACCGTTAGAGTTTTCGAGAGTTTGGAACACAAAGTTCGACCCAATGAGAGGTCTTCAGGTGGTTTGGACGACACATCTTCCAAACTTTTCTCCGTTTGAGTTTTGGAGAGTTTGGAACACAAAGTTAAGTCCAATGAGAGATCTTGAGGTGGTTTGGATGAAGATGGTCCAAACTTTGCTCCATTTGGGTTTTTGAGGGTTTGGAACACAAAGTTCGGCCCTATGAGAGGTCTTCATGTGGTTTGGACGAACATGGTCCAAACATTGCTCCGTTTGAGTTTTGGAGAGTTTGGAACAAAATGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGATGAAGATGGTCCCAACTTTGCTGTGTTTGAGTTTTCGAGAGTTATGAACACAAAGTTCGCCCTAATGAGAGGTCTTCAGGTGCTTTGGACGACACATGGTCCAAACTTTTCCCCTTTGAGTTTTGGAGAGTTTGAAACACAAAGTTTGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGACAAAACTTTGCTCCGTTTGAGTTTTCGAGAGTTTGGAACACAAAGTTCAGCCCAATGAGAGGTCTTTAGGTGGTTTGGACGAAACATGGTCCAAACTTTGCTCTGTTTGAGTTTTGGAGAGTTTGGAACACAAAGTTCGGTCCAATGAGATATCTTTAGCTGGTTTGGCCGAAGAAGGTCAAAACTTTGCTCCGTTTGAGTTTTCGAGAGTTTTAAACACAAAGTTCGGCCTAATGAGTGGTCTTCAGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCTGTTTGAGTTTTGGATAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACAAAGTCGGTCCTATGAGAGGTCTTCTGGTGGTTTGGATTACACATGATCCACACTTTGCTCCCTTTGAGTTTTGGAGAGTTTGAAACACAAAGTTTGGTCCAATGAGAGATCTTTAGGTGGTTTGGAAGAAGATGGACCAAACTTTGCTCCCTTTGAGTTTTCGAGAGTTTGGAACACAAAGTTCAGCCCAATGAGAGGTCTTCAGGTGGTTTGGAGGACCCATGGTCAAAACTTTGCTCTGTTTGAGTTTTGGAGAGTTTGGAACACAAAGTTCGGTCCAATGAGATATCTTTAGCTTGTTTGGCCGAAGAAGGACCAAACTTTGCTCCGTTTGAGTTTTCGAGAGTTTGGAACACAAAGTTTAGCCCAATGAGAGGTCTTCAGGTGGTTTGGATGACACATGGTCCAAACTTTGTTCCGTTGGAGTTTTGGAGAGTTTGGAACACAAAGTTTGGACCAATGAGATATCTTTAGGTAGATTGGACGAAGATGGTCCAAACTTTGCTCCGTTTTAGTTTTCGAGAGTTTGGAACACAAAGTTCGGCCTAATGAATGGTTTTCAGGTGGTTTGGACGACACATGGTCCAAACTATGCTCTGTTTGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGGTGGTCAACTTTGCTGCGCTTGAGTTTTCGAGAGTTTTGAACACAAAGTTTGGCCCTATGAGAGGTCTTTCTGGTGTTTTGGACGACACATGGTCCAAACTTTTCTCCCTTTGAGTTTTGGAGAGTTTGAAACACAATGTTTGGTCCAATGAGAGATCTTTAGGTGGTTTGGAAAAAGATGGATCTTTAGGTTGTTTGGACGAAGATGGACCAAACTTTGCTCCGTTTGAGTTTTCGAGAGTTTGGAACACAAAGTTCGGCCCAATGAGAGGTCTTCAGGTGGTTTGGACGACACATGGTCAAAACTTTGCTCTGTTTGAGTTTTGAAGAGTTTGGAACAGAAAGTTCGGTCCAATGAGAGATCTTTTGGTGCTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACATAGTTCGGCCCTATGAGAGGTCGTCTGGTGGTTTGGACGACACATGGTGTAAACCCGAGACTTCCCTTGGATGATTTTCTCTTGTCATCTTTTGTGGAAGTTGAATTTATGTTGTTGGGATTTACTAATTTAAAAGAAGAAAGACAAGAAATGAAATAAAGAAGAAAAGAAAAGGAAAGAAAAGGAAAAGGAAAAGGAAAAAGGAAAAAAAACAAAAAAAAAGAGAGAATGGGAAAAATTCTGGCGGTGCTTTAAAACCCACCACCGACAATCATCTATATCAGCTCATTTCAGCCCATTTCTCCATTTTTTCCCCAACCAAACTTCAGAGCATTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGATTTTCAGGGTTTTGGGGTTGAAGAAGATAGGAAACAGCTCAAGCAAAGGCAGCCATGGCAGAATCTGGGTTCAACCTACCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAGGAAGAACTAGGAGGTGAGGTTTGGTTTTCTTTAAAGTTAATCCATTTTCTAACAAATTTCATGAAGGAAGCTTGAGCTAAATCTGATGATAAGTTAACGGTTTGTGGAATGGAAAACTGAGCACCGAATTTTCGTGCAAACCAGAAGGATCTCTGGTTTTCTCTTGTTTTTCGAGCTTTATGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAATCTTATTCAATTTCCTATAACTTTCATGAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTTTGGACAAATTGGTTGGTAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGCTTGTTCGCAAATGAAGAGTTTGATGTATAGTACATTAATTTTGGTTAAGTATGGAGGAAGTTATGAGTGTTGGAAGTTGTGGTATTGAATCTGGAAAATCTGGAAAAGTAGAATGTGAAGTGTGATTTTTGATTCAAGTGTTTAGAATTCATGAGCATGGAAAGACAAAGCTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGATCGAGTCTACGGACCAGGAAACTAGCTAAGACAGTGAGTGACCAAAACAAATTTCGAACATTGTTTCTAACGGTTGTTCAAGATTAGATGTTTTATATGTATTTCTATGAATGATACATGATTTCTATGAACGGTTTCAAGCATAAGTTTTAAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGATTAATGACTAATGAAAATTAGTTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTTTTAAAGATTTTCAGTTTTTTTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGTAGGCATGTTTTAATGTTTTCATGTGGTTTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATTCCGTTTTACGAAACGATAAGTAGGCATGTTTTACGAAAGGTACCGTGTGCACACAAGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGACAGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGCAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACCTGCGATGTTTTAAGAAAGCTTTTATCGTTGCACGTTTATGTTTAACGCCTTGGTTGAGAAGCTTTATACGTTTAAAGTTTTATCACGTGTTTTGATTTCCGGATTTACAAGTTTTAAATTTAGTCACTCACTAGGCTTCGTAGCTCACTCTTTCAAAATCTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCTGTGCCGTATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACATTGAGTCTGTCTATATTGTAAATGTTTTTGTAAGGATTGAATAATTAACGGTTTGTGTAAGTTCTAGAGGTCGTGGTTGTATAAACCCCAGTTGAATGTGGTTTTGGTTGTGATATCTATATCTGGTTATTTTCTAACTTGAGTTACGTCAGGGCTGCACCCCATGTACGTCTACAGGATTTCAGGGATTCCGTTGTGTTGTGTTTCATGTAGAATATTTTATATCTAAGATTAGAATGTTTATCAGGTTCAACGTTTCAGAAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGACTAAGGTAACAGGTGGTCAGGGAGGGGGTGTGACACATGGTCCAAACTTTGCTCCCTTTGAGTTTTGGAGAATTTGAAACACAAAGTTTTGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGACCAAACTTTGCTCTGTTTGAGTTTTCGAGAGTTTGGAACACAAAGTTCAGCCCAATGAGAGGTCTTCAGGTGGTTTGGACGATACATGGTCCAAACTTTGCTCTGTTTGGGTTTTTGAGAGTTTGGAACACAAAGTTCGGTCCAATAAGATATCTTTAGCTAGTTTGGCCGAAAAAGGTCAAAACGTTCCTCCGTTTGCGTTTTCGAGAGTTTTGAACACAAAGTTCGGCCTAATGAGTGGTCTTCAGGTGGTTTGGACGATACATGGTCCAAACTTTGCTCTGTTCGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACAAAGTTCGGCCCTATGGGACGTCTTCTGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCCCATTGAGTGTTGGAGAGTTTGA

mRNA sequence

ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGTATCAGAAGCTCTATTTGGTTATATTTCATTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCCCCACTACGACAAAGACGGTGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACTCTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCTATATTGTAAATGTTTTATTAGTATGTTTATCGGGTTCTACGTTTCAGAAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGACTAAGCTAGCCGGTGGTCTGGGAGGGGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTGTATCGAATACAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGTTTGGAACACAAAGTTCGGCACAAGGAGACGACTTCAGGTGGTTTGGACGACACATGGTCCAAACTGTGCTCCGTTGGAGTTTTGGAGATTTTGGAACACAACGTTCGGACCAATGAGATATCTTTAGGTAGATTGGACGAAGATGGTCAAAACTTTACACCGTTAGAGTTTTCGAGAGTTTGGAACACAAAGTTCGACCCAATGAGAGGTCTTCAGAAGGATCTCTGGTTTTCTCTTGTTTTTCGAGCTTTATGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAATCTTATTCAATTTCCTATAACTTTCATGAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTTTGGACAAATTGGTTGGCCAAGAGGAAATAGATCGAGTCTACGGACCAGGAAACTAGCTAAGACAGTAGAGATCGAGCTCCCTGTGCCGTATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTTCAGAAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGACTAAGAGTTTTGAACACAAAGTTCGGCCTAATGAGTGGTCTTCAGGTGGTTTGGACGATACATGGTCCAAACTTTGCTCTGTTCGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACAAAGTTCGGCCCTATGGGACGTCTTCTGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCCCATTGAGTGTTGGAGAGTTTGA

Coding sequence (CDS)

ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGTATCAGAAGCTCTATTTGGTTATATTTCATTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCCCCACTACGACAAAGACGGTGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACTCTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCTATATTGTAAATGTTTTATTAGTATGTTTATCGGGTTCTACGTTTCAGAAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGACTAAGCTAGCCGGTGGTCTGGGAGGGGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTGTATCGAATACAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGTTTGGAACACAAAGTTCGGCACAAGGAGACGACTTCAGGTGGTTTGGACGACACATGGTCCAAACTGTGCTCCGTTGGAGTTTTGGAGATTTTGGAACACAACGTTCGGACCAATGAGATATCTTTAGGTAGATTGGACGAAGATGGTCAAAACTTTACACCGTTAGAGTTTTCGAGAGTTTGGAACACAAAGTTCGACCCAATGAGAGGTCTTCAGAAGGATCTCTGGTTTTCTCTTGTTTTTCGAGCTTTATGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAATCTTATTCAATTTCCTATAACTTTCATGAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTTTGGACAAATTGGTTGGCCAAGAGGAAATAGATCGAGTCTACGGACCAGGAAACTAGCTAAGACAGTAGAGATCGAGCTCCCTGTGCCGTATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTTCAGAAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGACTAAGAGTTTTGAACACAAAGTTCGGCCTAATGAGTGGTCTTCAGGTGGTTTGGACGATACATGGTCCAAACTTTGCTCTGTTCGAGTTTTGGAGAGTTTGGAACAAAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTCCAAACTTTGCTGCGTTTGAGTTTTCGAGAGTTTTGAACACAAAGTTCGGCCCTATGGGACGTCTTCTGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCCCATTGAGTGTTGGAGAGTTTGA

Protein sequence

MVFGMENRAQDFRAKQEDLWFPLVFRAFWVVQVVSEALFGYISLLTLSVLRDNDAVVSAGPHYDKDGGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRVSLEEDDVRWLHAIFRTKLAGGLGGGYPRSHVSYMDALDQYVCIEYKRVVSHSVTRISLEHKVRHKETTSGGLDDTWSKLCSVGVLEILEHNVRTNEISLGRLDEDGQNFTPLEFSRVWNTKFDPMRGLQKDLWFSLVFRALWGVQVESEALFGMVGNLIQFPITFMKIKGSREPRICVVCVRGIFGQIGWPRGNRSSLRTRKLAKTVEIELPVPYTLPTSAESSRSSSSSTFQKGQQVSLEEDDVRWLHAIFRTKSFEHKVRPNEWSSGGLDDTWSKLCSVRVLESLEQKVRSNERSLGGLDEDGPNFAAFEFSRVLNTKFGPMGRLLVVWTTHGPNFAPIECWRV

Homology

[Close]

BLAST of Spg035200 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 2.8e-29
Identity = 85/144 (59.03%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 43  SLLTLSVLRDNDAVVSA-GPHYDKDGGSAGRAPLHRRTSKRWLYWACPTQRRSVML---- 102
           SL TLSVLRDNDAVVSA GPHYDKD G+A RAPLHRRTSKRWLYWACPT RRSVML    
Sbjct: 539 SLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTF 598

Query: 103 ------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRV 162
                 VEIEL VPDTLPTSAESS S+S         S  IV                  
Sbjct: 599 DVLVMPVEIELSVPDTLPTSAESSESNS--------RSAGIV------------------ 654

Query: 163 SLEEDDVRWLHAIFRTKLAGGLGG 176
               DDV WLH +FR K  GG GG
Sbjct: 659 --RGDDVCWLHVVFRAKTTGGPGG 654

[Close]

BLAST of Spg035200 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 2.8e-29
Identity = 85/144 (59.03%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 43  SLLTLSVLRDNDAVVSA-GPHYDKDGGSAGRAPLHRRTSKRWLYWACPTQRRSVML---- 102
           SL TLSVLRDNDAVVSA GPHYDKD G+A RAPLHRRTSKRWLYWACPT RRSVML    
Sbjct: 125 SLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTF 184

Query: 103 ------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRV 162
                 VEIEL VPDTLPTSAESS S+S         S  IV                  
Sbjct: 185 DVLVMPVEIELSVPDTLPTSAESSESNS--------RSAGIV------------------ 240

Query: 163 SLEEDDVRWLHAIFRTKLAGGLGG 176
               DDV WLH +FR K  GG GG
Sbjct: 245 --RGDDVCWLHVVFRAKTTGGPGG 240

[Close]

BLAST of Spg035200 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-20
Identity = 75/140 (53.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 44  LLTLSVLRDNDAVVSAGPHYDKDGGSAGRAPLHRRTSKRWLYWACPT----QRRSVMLVE 103
           L TLSVL DNDAVV           SAG+APL +R   RW     PT    +  S  LVE
Sbjct: 103 LSTLSVLSDNDAVV-----------SAGQAPLRQR---RWECRTGPTTSFFKMFSTFLVE 162

Query: 104 IELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRVS---LEED 163
           IELPVPD LPTSAESSRS+SSTW+ELY ESV++     V L     Q     S   +  D
Sbjct: 163 IELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGD 222

Query: 164 DVRWLHAIFRTKLAGGLGGG 177
           DV WLHAIFR K AGG GGG
Sbjct: 223 DVCWLHAIFRAKTAGGPGGG 228

[Close]

BLAST of Spg035200 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-20
Identity = 75/140 (53.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 44  LLTLSVLRDNDAVVSAGPHYDKDGGSAGRAPLHRRTSKRWLYWACPT----QRRSVMLVE 103
           L TLSVL DNDAVV           SAG+APL +R   RW     PT    +  S  LVE
Sbjct: 103 LSTLSVLSDNDAVV-----------SAGQAPLRQR---RWECRTGPTTSFFKMFSTFLVE 162

Query: 104 IELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRVS---LEED 163
           IELPVPD LPTSAESSRS+SSTW+ELY ESV++     V L     Q     S   +  D
Sbjct: 163 IELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGD 222

Query: 164 DVRWLHAIFRTKLAGGLGGG 177
           DV WLHAIFR K AGG GGG
Sbjct: 223 DVCWLHAIFRAKTAGGPGGG 228

[Close]

BLAST of Spg035200 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-16
Identity = 67/155 (43.23%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 29  WVVQVVSEALFGYI------SLLTLSVLRDNDAVVSAG-PHYDKDGGSAGRAPLHRRTSK 88
           ++ +++S  L+G +       L TLSVLRDNDAVVS G  HYDKD G  G    H     
Sbjct: 175 YMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGP--HYIVGL 234

Query: 89  RWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLS 148
             +             +EIEL VPDTLPTSAESS S+SSTW+E   E  Y  + +    S
Sbjct: 235 VNVGCTGRVLHHIDRSLEIELLVPDTLPTSAESSGSNSSTWLEFDFELFYKPSDVRTA-S 294

Query: 149 GSTFQKGQRVSLEEDDVRWLHAIFRTKLAGGLGGG 177
              ++      + E+DV WLHA+FR K+AGG GGG
Sbjct: 295 RICWEVRSAGIVRENDVCWLHAVFRAKIAGGSGGG 326

[Close]

BLAST of Spg035200 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-29
Identity = 85/144 (59.03%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 43  SLLTLSVLRDNDAVVSA-GPHYDKDGGSAGRAPLHRRTSKRWLYWACPTQRRSVML---- 102
           SL TLSVLRDNDAVVSA GPHYDKD G+A RAPLHRRTSKRWLYWACPT RRSVML    
Sbjct: 539 SLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTF 598

Query: 103 ------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRV 162
                 VEIEL VPDTLPTSAESS S+S         S  IV                  
Sbjct: 599 DVLVMPVEIELSVPDTLPTSAESSESNS--------RSAGIV------------------ 654

Query: 163 SLEEDDVRWLHAIFRTKLAGGLGG 176
               DDV WLH +FR K  GG GG
Sbjct: 659 --RGDDVCWLHVVFRAKTTGGPGG 654

[Close]

BLAST of Spg035200 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-29
Identity = 85/144 (59.03%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 43  SLLTLSVLRDNDAVVSA-GPHYDKDGGSAGRAPLHRRTSKRWLYWACPTQRRSVML---- 102
           SL TLSVLRDNDAVVSA GPHYDKD G+A RAPLHRRTSKRWLYWACPT RRSVML    
Sbjct: 125 SLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTF 184

Query: 103 ------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRV 162
                 VEIEL VPDTLPTSAESS S+S         S  IV                  
Sbjct: 185 DVLVMPVEIELSVPDTLPTSAESSESNS--------RSAGIV------------------ 240

Query: 163 SLEEDDVRWLHAIFRTKLAGGLGG 176
               DDV WLH +FR K  GG GG
Sbjct: 245 --RGDDVCWLHVVFRAKTTGGPGG 240

[Close]

BLAST of Spg035200 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-21
Identity = 75/140 (53.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 44  LLTLSVLRDNDAVVSAGPHYDKDGGSAGRAPLHRRTSKRWLYWACPT----QRRSVMLVE 103
           L TLSVL DNDAVV           SAG+APL +R   RW     PT    +  S  LVE
Sbjct: 103 LSTLSVLSDNDAVV-----------SAGQAPLRQR---RWECRTGPTTSFFKMFSTFLVE 162

Query: 104 IELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRVS---LEED 163
           IELPVPD LPTSAESSRS+SSTW+ELY ESV++     V L     Q     S   +  D
Sbjct: 163 IELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGD 222

Query: 164 DVRWLHAIFRTKLAGGLGGG 177
           DV WLHAIFR K AGG GGG
Sbjct: 223 DVCWLHAIFRAKTAGGPGGG 228

[Close]

BLAST of Spg035200 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-21
Identity = 75/140 (53.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 44  LLTLSVLRDNDAVVSAGPHYDKDGGSAGRAPLHRRTSKRWLYWACPT----QRRSVMLVE 103
           L TLSVL DNDAVV           SAG+APL +R   RW     PT    +  S  LVE
Sbjct: 103 LSTLSVLSDNDAVV-----------SAGQAPLRQR---RWECRTGPTTSFFKMFSTFLVE 162

Query: 104 IELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLSGSTFQKGQRVS---LEED 163
           IELPVPD LPTSAESSRS+SSTW+ELY ESV++     V L     Q     S   +  D
Sbjct: 163 IELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGD 222

Query: 164 DVRWLHAIFRTKLAGGLGGG 177
           DV WLHAIFR K AGG GGG
Sbjct: 223 DVCWLHAIFRAKTAGGPGGG 228

[Close]

BLAST of Spg035200 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-16
Identity = 67/155 (43.23%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 29  WVVQVVSEALFGYI------SLLTLSVLRDNDAVVSAG-PHYDKDGGSAGRAPLHRRTSK 88
           ++ +++S  L+G +       L TLSVLRDNDAVVS G  HYDKD G  G    H     
Sbjct: 175 YMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGP--HYIVGL 234

Query: 89  RWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLVCLS 148
             +             +EIEL VPDTLPTSAESS S+SSTW+E   E  Y  + +    S
Sbjct: 235 VNVGCTGRVLHHIDRSLEIELLVPDTLPTSAESSGSNSSTWLEFDFELFYKPSDVRTA-S 294

Query: 149 GSTFQKGQRVSLEEDDVRWLHAIFRTKLAGGLGGG 177
              ++      + E+DV WLHA+FR K+AGG GGG
Sbjct: 295 RICWEVRSAGIVRENDVCWLHAVFRAKIAGGSGGG 326

The following BLAST results are available for this feature:

BLAST of Spg035200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065516.1	2.8e-29	59.03	uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]	[more]
TYJ98800.1	2.8e-29	59.03	uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]	[more]
KAA0037581.1	1.8e-20	53.57	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	1.8e-20	53.57	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK08801.1	3.6e-16	43.23	hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]	[more]

BLAST of Spg035200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg035200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGQ5	1.4e-29	59.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BG85	1.4e-29	59.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BTP3	8.9e-21	53.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	8.9e-21	53.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5D3CAC6	1.7e-16	43.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg035200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 435..455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035200.1	Spg035200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity