Spg033063 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCGGCCGCTATCGTCAAACCGACGGCAACCGCTGCTACCGAGCCAATCCGTCTCCGGCAGCGTCCGGTTCGCGGAGGTTGCCGGCGGCACAACCGCGGAGTGCGCGGCCGTGTGCTGCTGTTGTCCTTGCATCGTCATCAACGTCCTCGTCCTCGCCGTTTACAAGGTTCCGGCCGGACTCTACCGCCGCGCCCTAAGGACGAAGCGCCGGCAGAGGGTGAAGAAGAAGGGAGGTTCTCCGGCGTGGCGCGGCCGGCACTCGATCGGCGGCCTCGACGAGACGGATATCCAGATTCTTTCATTCGGAAAAACGATGTACTCGTCGGAACCGAAAGGTCAAAAATCGGAGGAGACGGATAGGAAAGTGATGGAACTGGAGAAAGAGATGTGGGAGATTTTCTACAGCACTGGATTCTGGAGAAGCCCCTCACAGAGAGATCAAATTTCAGTCTCCAAATGA ATGATCCGGCCGCTATCGTCAAACCGACGGCAACCGCTGCTACCGAGCCAATCCGTCTCCGGCAGCGTCCGGTTCGCGGAGGTTGCCGGCGGCACAACCGCGGAGTGCGCGGCCGTGTGCTGCTGTTGTCCTTGCATCGTCATCAACGTCCTCGTCCTCGCCGTTTACAAGGTTCCGGCCGGACTCTACCGCCGCGCCCTAAGGACGAAGCGCCGGCAGAGGGTGAAGAAGAAGGGAGGTTCTCCGGCGTGGCGCGGCCGGCACTCGATCGGCGGCCTCGACGAGACGGATATCCAGATTCTTTCATTCGGAAAAACGATGTACTCGTCGGAACCGAAAGGTCAAAAATCGGAGGAGACGGATAGGAAAGTGATGGAACTGGAGAAAGAGATGTGGGAGATTTTCTACAGCACTGGATTCTGGAGAAGCCCCTCACAGAGAGATCAAATTTCAGTCTCCAAATGA ATGATCCGGCCGCTATCGTCAAACCGACGGCAACCGCTGCTACCGAGCCAATCCGTCTCCGGCAGCGTCCGGTTCGCGGAGGTTGCCGGCGGCACAACCGCGGAGTGCGCGGCCGTGTGCTGCTGTTGTCCTTGCATCGTCATCAACGTCCTCGTCCTCGCCGTTTACAAGGTTCCGGCCGGACTCTACCGCCGCGCCCTAAGGACGAAGCGCCGGCAGAGGGTGAAGAAGAAGGGAGGTTCTCCGGCGTGGCGCGGCCGGCACTCGATCGGCGGCCTCGACGAGACGGATATCCAGATTCTTTCATTCGGAAAAACGATGTACTCGTCGGAACCGAAAGGTCAAAAATCGGAGGAGACGGATAGGAAAGTGATGGAACTGGAGAAAGAGATGTGGGAGATTTTCTACAGCACTGGATTCTGGAGAAGCCCCTCACAGAGAGATCAAATTTCAGTCTCCAAATGA MIRPLSSNRRQPLLPSQSVSGSVRFAEVAGGTTAECAAVCCCCPCIVINVLVLAVYKVPAGLYRRALRTKRRQRVKKKGGSPAWRGRHSIGGLDETDIQILSFGKTMYSSEPKGQKSEETDRKVMELEKEMWEIFYSTGFWRSPSQRDQISVSK Homology
BLAST of Spg033063 vs. NCBI nr
Match: XP_038905288.1 (uncharacterized protein LOC120091362 [Benincasa hispida]) HSP 1 Score: 255.4 bits (651), Expect = 3.2e-64 Identity = 129/151 (85.43%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Spg033063 vs. NCBI nr
Match: KAA0043783.1 (uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa] >TYK25350.1 uncharacterized protein E5676_scaffold352G004890 [Cucumis melo var. makuwa]) HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63 Identity = 126/154 (81.82%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of Spg033063 vs. NCBI nr
Match: XP_011652052.1 (uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical protein Csa_001735 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 6.0e-63 Identity = 126/154 (81.82%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Spg033063 vs. NCBI nr
Match: XP_016899649.1 (PREDICTED: uncharacterized protein LOC103486710 [Cucumis melo]) HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57 Identity = 119/154 (77.27%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Spg033063 vs. NCBI nr
Match: XP_023539516.1 (uncharacterized protein LOC111800159 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49 Identity = 108/153 (70.59%), Postives = 124/153 (81.05%), Query Frame = 0
BLAST of Spg033063 vs. ExPASy TrEMBL
Match: A0A5D3DQ13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004890 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64 Identity = 126/154 (81.82%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of Spg033063 vs. ExPASy TrEMBL
Match: A0A0A0LGV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.9e-63 Identity = 126/154 (81.82%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Spg033063 vs. ExPASy TrEMBL
Match: A0A1S4DUJ2 (uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 8.2e-58 Identity = 119/154 (77.27%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Spg033063 vs. ExPASy TrEMBL
Match: A0A6J1GVU4 (uncharacterized protein LOC111457605 OS=Cucurbita moschata OX=3662 GN=LOC111457605 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 107/153 (69.93%), Postives = 124/153 (81.05%), Query Frame = 0
BLAST of Spg033063 vs. ExPASy TrEMBL
Match: A0A6J1F7R8 (uncharacterized protein LOC111441632 OS=Cucurbita moschata OX=3662 GN=LOC111441632 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.5e-47 Identity = 106/154 (68.83%), Postives = 120/154 (77.92%), Query Frame = 0
BLAST of Spg033063 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 75/180 (41.67%), Postives = 99/180 (55.00%), Query Frame = 0
BLAST of Spg033063 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22 Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of Spg033063 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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