Spg032615 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032615
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationscaffold11: 7003759 .. 7012496 (-)
RNA-Seq ExpressionSpg032615
SyntenySpg032615
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTCGAGATGTTGCTGAATCGAGTCAAACCCGTGCCATCAAAGACAAGGGAAAGATTATTGCACAAGATCAGTCACAACACTCCACTTCTATTGCTTCACTATTTGTACAACAGCTCCAGGATATGATCATGAATACCATCAGAGCTCAATATGGTGGACCGATGATAGAGAGCATAGCTAGCTAGTTTTCCCTAATTAATTTAGCTAGTCTTTTATAATTTATTGGCCAAAATTATGCATTTATGTGTTGTATTTGTAGGAAATATAGTTTTGAGCCAATTGGATATTCGGGATGCGAAAAGAAGCTGAAGAATGAAAAAGAATCAAAGTTGGAAGATTGAAGATAGGCCCATCCGCAGACCAGCGTCGAGATGCTGCTCTCTGGGCGTCTCGACGCTGACATTCTATATTTGGAGTTTTCAATAAAAAAAAAATCATAGCATCGCGACGCTCTCGAAGAATTTTCCAGATTCGCGGTATCACGACAGCGTCGCGACGCTACGACCAAATTTTTTCCTATTTATATTTTGCAATTAGGACTTTTTTGGTGACTTTGGAGCCGTAAAACAGAGAGAAAAGGCTTCTATGAAGGCTGAAGCAAGTGGAGAAAAGTGGATTTCAAGGCTTTTTTCGTGGAGATTGTGACGGGGACGTTCGGTCTCGGCCTACTTAGCGTTTACTTCTCTTTTCCCTTTTCTTTAGTAGTTTTTATGGCTTATTTAGACTTAGTTTATATCGTAACGCGGATTATGTGTAGCTAAGTTTATTTCTTAGGGATTGATGTAGTCGTTGGGCACTTTATGGATTGAATTTATGGATTGTTGTTATTGATTCATTTATGCATATTGTATGTTTAATGCTTTCAATTTACCGGTCATGAATTGAATGTTGATTGTGATTAAATCTAACTCGGGAGAGAGGATTTACATTAAAACTCATTGTGCATAGCTAGGATTTAGCTAGAAATTGGGAGATAATAGTTAAATCTAGAAATCGTTAAAAAGGATAACCTTAATGTCTTGCATGGTTAATGAATTTAGATAGGGATATCGGGTTCATTTCATGTGGGAGAATTATGTATGCTCGGGAGAGATATGTGTGATTTTAGTATTCCAAGATTTATGAATCATAGCATGTCATTAATCCATGAATTAATCCATAATCCCAATTGGTGAAATCAATTCCCTAAGACCGCTGTCATCAATTGTTTGTCACACTTTTTCTTATTGTTTTGTTTTAGAATTGCTTTCTTTACCACTAAAATTTGTTCCCTAAATAAAATTGGGCAAGAGTTTTTTCGGTAATTAAAATTGATTAGAAATCCAATCTAGAGGATGACATTCGAATATCACATTCACTATATTATTACTTGACCCGTGCGCTTGCGGTAGGAAAAATCCACATCAAGTTTTTGGCGCCGTTGCCGGGGATTGGCATATTTAGTCATTTTTAATATCGAAGAAAAATTGTCCGGTCTTAGTTTATGGTGTATTTTATTTTTTTGTTATTTTTGTTTTTAGGTAGATTGCATTTTTTTCCTTTATCGTTTTTCTTTTCCATATTTGGATTTTTCCATTTTTGTTTGAATTTCCCATAGATAGAATTTCCTTTTTAGTTTTATCCTTTGTAGATTAATTTTTCCTTATTTGGTAGTTTTCTATTTTGTTTTTGCCATATTTGATTTTTCATTCCTTATTTGTTTATCTTTTCCTTTTGTAAATTATATTTAATTTTTTTCCATATTTTCTTTCATGCCATATTTAGTTTTTCCTTTTTTGTTTTTTTCCTTTTCTATTTTGTTTTCTTTGTTCTTATTTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTGTTTGAGTCTTAGACCTTTGTTCTTGTTGGGTTATTATTTGATTGGAAGCCTAATTATCATTGTTTCTTTAATTGATTTGAATGGCTATTTATTCAACTCCATATTCCAATTTTTCATCTTCAAGTTATACCCCTTTAAAAGAAAATTCTTCCTTAAAAAGCTTAGTTCAAAATTATATTGAGGAGTCTAGAGCGAGGAGTTTAAAATTTGATGAAATTATAAAAGGACTTCAAACCCCAAAGGAAGTTAGGGAGGTGGGATCCACTTCCCTAGGTTGTCTAGTGAGTAATGTGGCAGATGAATCATTGGCACCCATTCAAGAGCTTAGTTCTTTCGATTTTGCTACGGATGAGCATTTAGGGGTGAGTTGCATAGATAGAGGAGAAGAATTGGAGAGTTGTAGCACCTATCAAGAACGTGTTTGTGAGGAAGGAAAAGAAAATGAGCTTGTAGTGTCAGAGAAAGTTCAGGAGGTAGAGTTTGAGGTTGAACAACCTTCGTCTGTTTTATCTTCTCCATCCTTTGTAGAATATGATTGTTCCTTTTTCTATTCTCATGAGTCAGTTTTAGAGTCAGAGTCTCTTTATTTTGATCTTTCTCCCTTTATGCTTATTTTATTCAAAAAGACCAAATATAATTTCGTTTCAGGGGCCCATGAGAAGCTAGTAAGCTTGCTAGCGATTGTGAGATTTATTGATTCAAGAAAGAAGGGCCCAAAGAAATACGAGAATTTTTTATGTGCCTTGATAGACTGGATGAGCACGTCGAGCTAAAGACGTTAAACAAGCGTTTATGGGAGGCAACCCAAAAAAGTTAAGTTGTGTTTTTCTTTTTGCTTTTGATTTATTGTTTGTTTTTGTTTTGTAGGTCTTGGTTCCAATTTCTTCTTTGCTTGCAAGCTTCCATAAAAGAGGACATCGTCATTCCAGGACAGTATTGTTCACTCCTCCTACTCTTTTATTGTTCTCATGCTTGGTTATGCCTTATTTTCTTTATACATTGAGGACAATGTATGTTTTAAGTTTGGGGGTGGAATAGCATGTTTGTGGAGCCCTTGAGCATCTGAGTTCGGGCTATAGTTTTGAGCTTTCTTTGAAATGAGCATATGGTTGTTTTCTGGATGTCATTTTTTCATGACTATGATTTCCTATGATAGGCTTTATTGTCAATTTTCAAGCTTTCGATGAGTTGTAAGCATGAGTGCCCAAAAAGGGAAACTTTTTAAACTTTTTCTAGGAGATGTCTTGCATGAGTAGAGTATTTGTCTTGGCTAGATTTGGATTTGAATGCTTAGGAGCGAATTATTAGGTTCATATGCTTGTTGTCACCTCGATAGGTGTAGGGAAGAGCTAAAGAGTTAATTTTTTGCAAATTAGCATGTTTGATCTTGCTTAGGAGGAAAGAAAAGAATATATGCTTATCATGCTCATAAAGAAAAATCATTCTTGTTGTTACAATTTGAAAGAAAAAAAAAAGAGAAAGTCATGACTTATGCGCGCAATGCAATGCTTAATAAAGTTTTGGCAAAAAGAGCTACCCCTGTTGTGATCAGTTAGGCCAACCAAAGGGTAAAACTCGGGTTAAGGGTCCCTGCAATAGGTGTGTGAAAGTTAGTGCCACATAAAAATGCATGTTGTAATTTTCAATTATAAGCACCTAAGTATGGAGGAAAAGAAACTAATTTGTTCCATTGACTCGTTAGTGAATCCTTAGTGCCAGTGTAGAGGGAAGATGAGTTGAGAGTTTAGTAATCCAATCCCGGGCTAGTAGAGTCTGATCTCGTTAAGTTAGATCTCGCTTGTGCAAGTTAATTTTGGAAAACTTTTGATTTGTCTCCCTCATTGGTCCTTATGTGCATGTCTCTTGATTGCTTGATTATTGACTTTTGAGCCTTGAGGATTGAGTCATGTTTGTTGCATCCATTCTTCCATTGTATGCTTGGTTTTTAGTTTGCTCGAGGACTAGCAAAAGCGTAAGTTTTGGGGTGTTTGATAGCGAGCATAGCTAGCTAGTTTTCCCTAATTAATTTAGCTAGTCTTTTATAATTTATTGGCCAAAATTATGCATTTATGTGTTGTATTTGTAGGAAATATAGTTTTGAGCCAATTGGATGTTCGGGATGCGAAAAGAAGCCGAAGAATGAAAAAGAATCAAAGTTGGAAGATTGAAGATAGGCCCATCCGCAGACCAGCGTCGAGATGCTGCTCTCTGGGCGTCTCGATGCTGACATTCTATATTTGGAGTTTTCAATCTAAAAAAAAAAAGAAAAAAAAATCATAGCGTTGCGACGCTCTCGACGAATTTTCCAGATTCGCGGTATCACGACAGTGTCGTGACGCTACCCCCACAGCGTCGCGACGCTACGACCAAATTTTTCCCTATTTATATTTTGCGATTAGGGCTTTTTGGGGGACTTCTTTTGGACGATTTAGAGCCGTAAAACAGAGAAAATTAGCCTCTTTTGAAGTTGTACCAAGTGGAGAAAATTGGGAATCAAACCATTGTTCGTGGGGATCGTCACGGGGACGTGCGGTCTCGGCCTACCTTGCATTTAATTCTCTTTACCCTTTACTTTAGTTAGTTTTTATGGCTTATTTAGACTTAGTTTATATTGTAATTTGGATTATGTGTAGCTAATTTTAATTCTTAGGGATTGATGTAGCCGTTGGGCACTTTATGGATTGATTTAATGGTTTTATTGCTATTGATGTCATTTATGCATAATTGTGTTCTTAATGCTTTACATTTACCGGTCATAAATTGATTGTTGTTTGTGCTTGAATCTAACTCGGGAGAGAGGATTTAGCTTAGAAATCATTATGCATAACTAGGATTTAGCTAGAAATCGGGAGATAATAGTTAATTCTAGAAATCATTAAAAAGGTGTTAACTGTTGGGTTTCCAGAGTGAGGAAAAATAAGATATAAAGAGACTCTAGAACTCTGTGCAAGTATACACAGTCTGCAGCAAGTAATAAGTATTTATCGAATCCAAGGTCTGAATTAGCTTTCACTTTATCTATTTTGTTTAGTTTTTCAATGGTTTCAAAAGTGGGAAAAATGATTGGTTTTTATAGAATGCTGGAGCAAAAGAAATGATAGAACAGAAAGTAAACAAATAGGCAGACAGATTAGAAACAGGCGTTGGTCAGGATTTAGCAATTGTTTTAAAAGATGCTCTAACAATATTTTGATCATGCAAAACTCTCGCAGTCTTATTAGCAGATTCCTCCCGAAACTCCGGATTTTTTAGAATGTGTTTCAACTCCAATGACGTACTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAGTGTAATTAAATGCCACACACTCCCTAAATCATCCCTGAAACTAGAAAGTGGTATTCATACCGACTGGCCAGACGGGCACAAAATATAAATGAGCACAACAAATAATCAAGATGCATCAATCAACATTTATTGCATAGATATTAAGCACGACAATTACATGTTTCCTAACCAACGCCTAAAATTACTTAGTTCATAAAGTGCATAGAGACACACATTACAATATAAGTAAATGCATCCATAACTTCAAAGTAATACAAGAAAATATTAATTCCCTTGATTGGTTTGCAATCGATGGTCTTCTTGTAGGTCTCCAATCTCTCTCCTCTATTCGGCTCCCAAAATGGAAATGAGAAATGATCCGTCCAAAAGTGGAATGTTCCTCCCAAGGATGGAATTCCCTTCCCAAAAAGGAATCAATTTGACTTGGGCGGCTATCTCCTTTTATAGAGTGATAGGAGGCTTGAATTAGGTTGACCTAGACACGTGGATGGCTCTCTTTGCTCTGTAAATCCGAGAATAGCTTAACAGAATTCAGTTTGTTAAATTGGCTAACGAGCTGTGACGTGGCAGTTTTGCTCCCAGCTTTGCTCCAGCACAGATTTTGCTCCCTCAAGTCGCTCAGCAATATATTCTGCACAAAATAACTTCCAAAGCATCCATTCTTCCAAATGGGTTAAAACATATAATATCTATCTAAAAGCAACCCTATTTAGCACAAAAGACACACAAATCCCTATAGAAATAAGGTCTAAATAACTCCCTTTTGGAGAGTTATCATTAACCTTAATGCCTTGCATGTTTAATGAATTTAGATAGGGATATCAGGTTCATTGCATGTGGGAGAATCATGTATGCTCGGGAGAGATATGTGTGATTTTAGTTTCCCAAGATTTATGAATCATAGCATGTCATTAAACCATGAATTAATCCATAATCCCAATTGGTGAAATCAAATCCCTAAGACCGTTGACTCCATTAGATTGTCATACTTTTTCATTGTTTTGTGTTTGATTATATTCATTCTCACTTTGATTAGTTCCCTAAATAAAATTGGGCAAGGGTTTTTTCGGTAATTAAAATTGATTAGAAATCCAATCTAGAGGACGACATTCGAATATCACATTCACTATATTATTACTTGACTCGTGCGCTTGCAGTAGGAAAAATCCACATCAACCGACTCAAAATTCTCTCTTGTATTCCAAGCCGTATACCAAGAGAATCGATAATCTGAGAATGCCTAATGGATACCAACCACCAAAGTTTCAACAATTCGACAGGAAGGGTAATCCCAAGCAGCACGTTGCTCATTTCATCGAGACATGTGAAAATGTTAATACTAGAGAAGACCTATTGGTCAAGCAGTTCGTACGAACACTGAAGGGAAATGTTTTCAACTAGTATATCGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAATGAGTTCATCAACCGCTTCTACAGCACAAGACGAACCGTCAGTATGACAGAGCTCACCAGCGCTAAACAATGGAAAGGCGAGCCGGTTGTTGACTACATCAACCGTTGGAGAGCTTTGAGCCTAGATTGCAAGGACCGACTCACTGAAGTATCTGCAGTCGAGATGTGCATCCAAGGCATGCATTGGGGACTCCTCTATATCCTGCAAGGAATAAAGCCCCGCACTTTCGAGGAGTTGGCAACCCGCGCTCATGACATGGAATTGAGCATTGCTACGAGAGGGAACAAAGATCCTTTTGTCCCCGATGGCAGGAAAGAAAAGAAAGAAGTTAAGAATGCTGAGAAAACTACCAAAAGTACTACCAAAGAGTCAATGGTAATCAATGCAGCTCCTTTCAAGTTTTCTTCGAAAGGAAAAGAAAAGAAGATGGAGAAACAACAAGAGGGAGGCGAGAGAAGTCGTTTGACCCTGAAGGAAAGACAAGAGAAAGTTTACCCTTTTCCAGATTCTGACATTCTAGATATGTTAGAACAACTCCTGGAAAAACAACTTATTGAACTACCAAAATGTAAGCGACCAGAAGAGATGGGGAGAGTTAATGATCCCAACTACTGGAAGTATTACCAAGTCATCAGCCACCCGGTGGAAAAGTGCTTCGTTTTGAAGGAGCTAATTTTGAAGTTAGCTAAAGAAAAGAAGATTGAGTTAGATCTTGATGAGGTAGCTCAATCAAATCATGTGATGATAGCAACAAATCTCAACAACCGAGTAGCTCCAAGCCCGATTCATAATTCAGTAGCAAGTCTGATTCAGTTCGGTACATTAGAGCCGATTATTATTTGGCTTTAGCAAGAATCTTCAAGTGACACCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAAGATGGACTTTGGTAACTCGTCGAAAGATGCAAAAGAAACATTTCGTTCAAAGAAAGCCTCACATGTTCCGAAACTACAAAAGAAAGAACATATCACAAAAGCAGAAGAGAAAGAAAAAAGGCTCAAGAAAACCTAAACTGGTTGTTGAAAAGAATCAAGATTTTGTTCTACCGCGACATTCAGTAACCCTTAAAGATTTCTTCCCAAATAACTTTCTTAATGACGATCATGAGGATATCCCTGAGATAGTCACATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGGTGATGATAAGGCCAGAAGATTCGCCTTCATTCACAATAGATGATTTGTTGTCACTTCCTCAAGCAACCAAAGATGCTATTGTTGAAACATTGAAAAGTTCTAACGTTTCAGACTTTCCAGACTTGCAAGAACACAAATGTGCCTCATGTTATATGTCCATTAGCTTCACAGATGAAGACTTAATGTTGGGATCGAAGCCTCATAGTAGGCCCTTTATTCGTCTCAAGATATATTCGAGAGCAAAAAGTTGGTCGAATTCTTATCGACGATGGATCTGCGGTGAATATAATGCCTAAGTCAACCATGACACAAATAGGAATTTCAATGGATGAACTATCAAATAGTAGGTTGGTTATTCGAGGGTTCAACCAAGGCGGCCAACGAGCAATCAACATGATCCGTTTGGAGCTTGTTATTGGAGATTTGAAGGCCAACACTTTATTCCATATCATAGATTCCAAGACCACTTACAAGTTGTTGTTAGGTCGTCCTTGGATTCAAGGAAATGGAGTAATATCTTCTACACTTCACCAGTGTTTCAAGTTCTATCAAGACGGCGTGAAGAAAGTTGAAGCTGGTACCAATCCATTCTCAAAGGCAGAATCCCACTTTGCAGATGCAAAATTTTATATGCAGAATGATAAAGCAGGAGGAATTGTACCAACCGAGATTCCTCTGATTGAAAATCAAAAAATAGAGCATCAAAAGAATGTGAAGAAAGAGTCGATCGAAGAAGTAGATGTTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCGAATGTTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACGTTCCTTTATCTCGGCGCGAGTAA

mRNA sequence

ATGGAAAGTCGAGATGTTGCTGAATCGAGTCAAACCCGTGCCATCAAAGACAAGGGAAAGATTATTGCACAAGATCAGTCACAACACTCCACTTCTATTGCTTCACTATTTGTACAACAGCTCCAGGATATGATCATGAATACCATCAGAGCTCAATATGGACTTCAAACCCCAAAGGAAGTTAGGGAGGTGGGATCCACTTCCCTAGGTTGTCTAGTGAGTAATGTGGCAGATGAATCATTGGCACCCATTCAAGAGCTTAGTTCTTTCGATTTTGCTACGGATGAGCATTTAGGGGTGAGTTGCATAGATAGAGGAGAAGAATTGGAGAGTTGTAGCACCTATCAAGAACGTGTTTGTGAGGAAGGAAAAGAAAATGAGCTTGTAGTGTCAGAGAAAGTTCAGGAGGTAGAGTTTGAGGTTGAACAACCTTCGTCTGTTTTATCTTCTCCATCCTTTGTCTTGGTTCCAATTTCTTCTTTGCTTGCAAGCTTCCATAAAAGAGGACATCGTCATTCCAGGACAGTATTGTTCACTCCTCCTACTCTTTTATTGTCTCCAATCTCTCTCCTCTATTCGGCTCCCAAAATGGAAATGAGAAATGATCCGTCCAAAAAATCTTCAAGTGACACCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAAGATGGACTTTGGTAACTCGTCGAAAGATGCAAAAGAAACATTTCGTTCAAAGAAAGCCTCACATGTTCCGAAACTACAAAAGAAAGAACATATCACAAAAGCAGAAGAGAAAGAAAAAAGGCTCAAGAAAACCTAAACTGGTTGTTGAAAAGAATCAAGATTTTGTTCTACCGCGACATTCAGTAACCCTTAAAGATTTCTTCCCAAATAACTTTCTTAATGACGATCATGAGGATATCCCTGAGATAGTCACATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGAATGTGAAGAAAGAGTCGATCGAAGAAGTAGATGTTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCGAATGTTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACGTTCCTTTATCTCGGCGCGAGTAA

Coding sequence (CDS)

ATGGAAAGTCGAGATGTTGCTGAATCGAGTCAAACCCGTGCCATCAAAGACAAGGGAAAGATTATTGCACAAGATCAGTCACAACACTCCACTTCTATTGCTTCACTATTTGTACAACAGCTCCAGGATATGATCATGAATACCATCAGAGCTCAATATGGACTTCAAACCCCAAAGGAAGTTAGGGAGGTGGGATCCACTTCCCTAGGTTGTCTAGTGAGTAATGTGGCAGATGAATCATTGGCACCCATTCAAGAGCTTAGTTCTTTCGATTTTGCTACGGATGAGCATTTAGGGGTGAGTTGCATAGATAGAGGAGAAGAATTGGAGAGTTGTAGCACCTATCAAGAACGTGTTTGTGAGGAAGGAAAAGAAAATGAGCTTGTAGTGTCAGAGAAAGTTCAGGAGGTAGAGTTTGAGGTTGAACAACCTTCGTCTGTTTTATCTTCTCCATCCTTTGTCTTGGTTCCAATTTCTTCTTTGCTTGCAAGCTTCCATAAAAGAGGACATCGTCATTCCAGGACAGTATTGTTCACTCCTCCTACTCTTTTATTGTCTCCAATCTCTCTCCTCTATTCGGCTCCCAAAATGGAAATGAGAAATGATCCGTCCAAAAAATCTTCAAGTGACACCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAAGATGGACTTTGGTAACTCGTCGAAAGATGCAAAAGAAACATTTCGTTCAAAGAAAGCCTCACATGTTCCGAAACTACAAAAGAAAGAACATATCACAAAAGCAGAAGAGAAAGAAAAAAGGCTCAAGAAAACCTAAACTGGTTGTTGAAAAGAATCAAGATTTTGTTCTACCGCGACATTCAGTAACCCTTAAAGATTTCTTCCCAAATAACTTTCTTAATGACGATCATGAGGATATCCCTGAGATAGTCACATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGAATGTGAAGAAAGAGTCGATCGAAGAAGTAGATGTTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCGAATGTTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTACGCTACGTTCCTTTATCTCGGCGCGAGTAA

Protein sequence

MESRDVAESSQTRAIKDKGKIIAQDQSQHSTSIASLFVQQLQDMIMNTIRAQYGLQTPKEVREVGSTSLGCLVSNVADESLAPIQELSSFDFATDEHLGVSCIDRGEELESCSTYQERVCEEGKENELVVSEKVQEVEFEVEQPSSVLSSPSFVLVPISSLLASFHKRGHRHSRTVLFTPPTLLLSPISLLYSAPKMEMRNDPSKKSSSDTFQDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLVVEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKESIEEVDVCEVQSKEASAHPAKSNVPKEEASSNVPILRYVPLSRRE
Homology
[Close]
BLAST of Spg032615 vs. NCBI nr
Match: KAA0067092.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26327.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 3.6e-16
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 185 LSPISLLYSAPKMEMRND-----PSKKSSSDTFQDQLESVENEDERWTLVTRRKMQKKHF 244
           LSP +LL    KM+ + +     P+ + + +  Q + +S + +DE W +VTR+K +K   
Sbjct: 37  LSPFNLL---SKMQQKKENPWMIPTIEVTPEDSQGKEQSTKEDDEGWIVVTRQKKRKLTL 96

Query: 245 VQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLVVEKNQDFVLPRHSVTLKDFFPNNFLND 304
            Q++ H ++NY+R N  Q+ K+KKK +RKPKLV E+N+DF  P+  +TL DFFP  FL D
Sbjct: 97  TQKESHFYKNYRRLNSVQRNKKKKK-TRKPKLVHEENKDFSRPQCLITLADFFPTRFLCD 156

Query: 305 DHEDIPEIVTCHAVNAFEE 319
             ++ PE+V CHA+N  EE
Sbjct: 157 HQDENPEVVVCHAINEMEE 171

[Close]
BLAST of Spg032615 vs. NCBI nr
Match: KAA0054153.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 6.1e-16
Identity = 54/124 (43.55%), Postives = 83/124 (66.94%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++   +E +DE WT+VTRRK +K   +Q+KP  ++NY+R N +QK K+KKK +RK KLV
Sbjct: 151 QEKERLIEEDDEGWTIVTRRKKRKSTLIQKKPRFYKNYRRGNKAQKNKKKKK-TRKVKLV 210

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKE 332
            E+++DF   +  VTL DFFP  FL D  ++ P +V CHA+N  EE    S P +++++E
Sbjct: 211 HEEDKDFPRTQRLVTLADFFPTRFLGDHQDENPGVVACHAINTTEE---ESIPLRSLEEE 270

Query: 333 SIEE 337
            + +
Sbjct: 271 GVSK 270

[Close]
BLAST of Spg032615 vs. NCBI nr
Match: KAA0056780.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-16
Identity = 53/124 (42.74%), Postives = 86/124 (69.35%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++  S+E +DE WT+VTRRK +K   +Q++P  +RNY+R N +QK K+KKK ++K KL+
Sbjct: 93  QEKERSIEKDDEGWTIVTRRKKRKSTLIQKEPRFYRNYRRGNKTQKNKKKKK-TQKLKLI 152

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKE 332
            E+++DF   +  VTL +FFP  FL D  ++ PE+V CHA++A EE    S P +++++E
Sbjct: 153 NEEDKDFPRTQRLVTLANFFPTRFLCDHQDENPEVVACHAIDAIEE---ESIPLRSLEEE 212

Query: 333 SIEE 337
            + +
Sbjct: 213 GVSK 212

[Close]
BLAST of Spg032615 vs. NCBI nr
Match: KAA0046265.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK18936.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-15
Identity = 52/119 (43.70%), Postives = 82/119 (68.91%), Query Frame = 0 

Query: 218 SVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLVVEKNQ 277
           S+E ++E W +VTRR  +K    Q++   +RNY+R+N +QK K+KKK +RKPKLV E+++
Sbjct: 161 SIEEDNEGWIVVTRRMKRKSTLTQKESSFYRNYRRRNKAQKNKKKKK-TRKPKLVHEEDK 220

Query: 278 DFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKESIEE 337
           DF  P+  VT+ D FP  FL D  ++ PE++TCH +NA EE    S PS+++++E + +
Sbjct: 221 DFPQPQRLVTMADLFPTRFLCDHQDENPEVITCHTINATEE---ESIPSRSLEEEGMSK 275

[Close]
BLAST of Spg032615 vs. NCBI nr
Match: KAA0064171.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-15
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++   +E +DE WT+VTRRK +K   +Q++P  +RNY+R N +QK K+KKK +RK KLV
Sbjct: 238 QEKERLIEEDDEGWTVVTRRKKRKSTPIQKEPRFYRNYRRVNKAQKNKKKKK-TRKLKLV 297

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPS 327
            E+++DF   +  VTL DFFP  FL D   + P +V CHA+NA EE  S +S S
Sbjct: 298 HEEDKDFPRTQRLVTLADFFPTRFLGDHQNENPGVVACHAINATEEEASPASSS 350

[Close]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match: A0A5D3DRM3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G001100 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-16
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 185 LSPISLLYSAPKMEMRND-----PSKKSSSDTFQDQLESVENEDERWTLVTRRKMQKKHF 244
           LSP +LL    KM+ + +     P+ + + +  Q + +S + +DE W +VTR+K +K   
Sbjct: 37  LSPFNLL---SKMQQKKENPWMIPTIEVTPEDSQGKEQSTKEDDEGWIVVTRQKKRKLTL 96

Query: 245 VQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLVVEKNQDFVLPRHSVTLKDFFPNNFLND 304
            Q++ H ++NY+R N  Q+ K+KKK +RKPKLV E+N+DF  P+  +TL DFFP  FL D
Sbjct: 97  TQKESHFYKNYRRLNSVQRNKKKKK-TRKPKLVHEENKDFSRPQCLITLADFFPTRFLCD 156

Query: 305 DHEDIPEIVTCHAVNAFEE 319
             ++ PE+V CHA+N  EE
Sbjct: 157 HQDENPEVVVCHAINEMEE 171

[Close]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match: A0A5A7UDR5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00770 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-16
Identity = 54/124 (43.55%), Postives = 83/124 (66.94%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++   +E +DE WT+VTRRK +K   +Q+KP  ++NY+R N +QK K+KKK +RK KLV
Sbjct: 151 QEKERLIEEDDEGWTIVTRRKKRKSTLIQKKPRFYKNYRRGNKAQKNKKKKK-TRKVKLV 210

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKE 332
            E+++DF   +  VTL DFFP  FL D  ++ P +V CHA+N  EE    S P +++++E
Sbjct: 211 HEEDKDFPRTQRLVTLADFFPTRFLGDHQDENPGVVACHAINTTEE---ESIPLRSLEEE 270

Query: 333 SIEE 337
            + +
Sbjct: 271 GVSK 270

[Close]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match: A0A5D3BE72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00360 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-16
Identity = 53/124 (42.74%), Postives = 86/124 (69.35%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++  S+E +DE WT+VTRRK +K   +Q++P  +RNY+R N +QK K+KKK ++K KL+
Sbjct: 93  QEKERSIEKDDEGWTIVTRRKKRKSTLIQKEPRFYRNYRRGNKTQKNKKKKK-TQKLKLI 152

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKE 332
            E+++DF   +  VTL +FFP  FL D  ++ PE+V CHA++A EE    S P +++++E
Sbjct: 153 NEEDKDFPRTQRLVTLANFFPTRFLCDHQDENPEVVACHAIDAIEE---ESIPLRSLEEE 212

Query: 333 SIEE 337
            + +
Sbjct: 213 GVSK 212

[Close]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match: A0A5A7TY01 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00180 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-16
Identity = 52/119 (43.70%), Postives = 82/119 (68.91%), Query Frame = 0 

Query: 218 SVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLVVEKNQ 277
           S+E ++E W +VTRR  +K    Q++   +RNY+R+N +QK K+KKK +RKPKLV E+++
Sbjct: 161 SIEEDNEGWIVVTRRMKRKSTLTQKESSFYRNYRRRNKAQKNKKKKK-TRKPKLVHEEDK 220

Query: 278 DFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPSQNVKKESIEE 337
           DF  P+  VT+ D FP  FL D  ++ PE++TCH +NA EE    S PS+++++E + +
Sbjct: 221 DFPQPQRLVTMADLFPTRFLCDHQDENPEVITCHTINATEE---ESIPSRSLEEEGMSK 275

[Close]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match: A0A5A7VEL0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00990 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-16
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0 

Query: 213 QDQLESVENEDERWTLVTRRKMQKKHFVQRKPHMFRNYKRKNISQKQKRKKKGSRKPKLV 272
           Q++   +E +DE WT+VTRRK +K   +Q++P  +RNY+R N +QK K+KKK +RK KLV
Sbjct: 238 QEKERLIEEDDEGWTVVTRRKKRKSTPIQKEPRFYRNYRRVNKAQKNKKKKK-TRKLKLV 297

Query: 273 VEKNQDFVLPRHSVTLKDFFPNNFLNDDHEDIPEIVTCHAVNAFEEGDSSSSPS 327
            E+++DF   +  VTL DFFP  FL D   + P +V CHA+NA EE  S +S S
Sbjct: 298 HEEDKDFPRTQRLVTLADFFPTRFLGDHQNENPGVVACHAINATEEEASPASSS 350

The following BLAST results are available for this feature:
BLAST of Spg032615 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0067092.13.6e-1641.73ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26327.1 ty3-gyp... [more]
KAA0054153.16.1e-1643.55ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0056780.17.9e-1642.74ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gyp... [more]
KAA0046265.11.0e-1543.70ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK18936.1 ty3-gyp... [more]
KAA0064171.11.0e-1548.25ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Spg032615 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg032615 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DRM31.7e-1641.73Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UDR52.9e-1643.55Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BE723.8e-1642.74Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TY015.0e-1643.70Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7VEL05.0e-1648.25Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of Spg032615 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032615.1Spg032615.1mRNA