Spg030926 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGATCCGCCTAGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGAGAGCAGCGTAGACAGCAAAATCAAATGGCTGACGTGCCGCATCTACCGCAGGGTCCTGAAGGTTTAGCGAACCCCCAGCAGAATCGTGTGCTGCAGCAAAACCCGCCGCTGGAGCAAAATGAGCAGCAAAATAATCAGGCTGAGAATCCTATCTTGGTAGTGAACGATAGGACCAGAGCCATTCGAGCTTATGCTTTTCCAATGTTTGATGAGTTGAATCCAGGGATTGCACGTCCTCAAATTCAAGCAGCAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACTGTGGGGCAGTTCCATGGTTTGGCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAGGAGTGCCTTGAGATGCTCTTAGATTAACTTTGTTCCCGTATTCTTTGAGGGATGGAGCGAAGGCAGGGTTAAATTCTTTTGCTCCAGGATCAATTAGGACATGGGATGAGTTAGCTGAAAAATTTTTGAGTAAATATTTTCCACCTAATAGAAATGCTAAATTAAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGCTTACCACATTGTATCCAAATGCAAACATTTTACAATGGATTAAACGCGGTAACTCAAGGTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTGGCAAAAACTTTTAACGAAGCCTATGAAATTTTAGAAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAGAGGCACAAATAAAAAGGTTAAGAGTGTATTAGAAGTTGATGGTGTGTCCACCATTAGGGCTGATCTTGCAATGATTGCTAACGCTCTTAAGAATGTGACAGTGATTAGTCATCAACAGCCGCCAGTTGTGGAGCCTGCTGCAGTGGTGAACCAAGTTGCAGAGGAAGCTTGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGTAGGTAATCAGAGGAATAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTCGCGTGGGGAGGACAAGGGAGTAATGTGCAAGCACAGCAAAAGGTGAACCAGCCGGAATTTGCTAAAGCGCAGGTATTGCCCCAGCAAAATAAGCAGGCTTTGCCCCAGCAGAATTCGGGGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGACGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTTGAATTGCAAGTGGGACAGCTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCTTTCAGATACTGAACACCCAAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAAAGAAAAGGGCCTAGTAAAACCCAGGATACAGATGGTAATTGTGATAGAAATGTTGTTGTTGAGAAAGAGTTGGAGTCTGGTCAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGTTCTGTTCCAGATGTGGAACCACCTTATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATCAGGATGGTCAATTTAAAAAGTTTTTAGAGATTCTTAAGCAATTGCATATAAATATCCCTTTAGTAGAAGCTATTGAGCAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTAACTAAAAAGAAGAGGTTAGGTGAGTTTGAAATTGTATCCCTCACTGAGGAATGTAGTGCTATTCTTAAGAATGGGCTACCACCCAAGGCTAAGGATCCAGGATCATTTACTATACATGTGTCTATAGGTGGAAAAGAGTTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGACCTACCACAGTTACACTCCAATTAGCTGATAGGTCTATCACATATCCTGAGGGGAAAATTGAGGATGTCTTAGTAAAGGTAGATAAATTCATATTTCCTGTTGATTTTATTATCTTAGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTGATAGATGTTCAAAAAGGGGAATTAACAATGAGGGTTTGTAATGAGGAAGTAAAATTTAATGTGTTTAAGGCCATGAAATATCCAGACAAAATGGAAGATTGCTCTTTCATTAGGATTCTGGAGAACACAATTGTTGAGACAGCAATGGAGGATTTGGCAAATAAGCATTTGGAGAATCATGGAGAGGTTAGTGTAGAGGATTTAGAAGTTTGTTCGTTAGAAAGAAAAAATGAAAAAGAAGTGTTTAGGTGTGAGGATGTTTTTGAGTCTTTGGATTTGGATGAAAGGAAAGCTCCTCCTATTAAACCATCCCTGATTGAGGCACCTACTTTAGATTTGAAACCCTTGCCGGATCATCTAAAGTATGTGTATCTTGGGGAGGGTGAGACGTTGCCCATTATTGTGGCATCAGATTTAATGCCGGAGGATGAAGAAGCTTTAATAAAGTTGCCTTTGTGTATTCTTCTCAAATCAGTGTTCCAAGTGTGCTTCATTGATGAACGGTTATTTACAGTAGCTCATATTAAGGCAGTGAAAGCACCTTGGTATGATGACATTTCCAATAACCTTGATTTTGGAAATTTGTCTCCTGGTTTATCAAAAGAACAGATGAAAGAATTTTTCCATGGGGTGAAGTTTTATTTATCAAATGATGCATCTGTGGTTAGACAATGTGTTGATGATGGCTGTGAGTTTGAAGAAGGGCAGCGAATAGAGCATTACTGGAGGGAGGAGTTTCGTTCGAAATATCTCTCTCTGAAGTTGCTGGCAAATTAGGGGAGCACAGGTTTTGCGGGAGCAGTTCTTATTGCAATATTTTTAGCTCCCAGAATTTGTTGCGATTTTATCTTGTGGATTTTATCTGATTCTGATTTGAATTATTTTAAAATTGGATTTTATTGATTTAAATTTTATCTGATTCATTGGAATATTTTCGTAGATTTTATTTTCAGTTTATTTAATTGTATTTATCGTTAATTTAATTGATTTAATCGGATTAGTTTAGATTAGATTTTAGGTTGTATTTTCGTTATTTGATATTTATGTTTAGTTTAGATTTAATAACGAGTTTCTCTAATTTATTCGGCTGCAATTGAAAATAAAAGATTAGATTTGATCGATTCAATTTAAATTTGAATTTAAAAAGATTTGATTTTCCTGTTTTTAAATTTGAATTCTGTATCCACGTTTCTTCAGGTAATCTTTTGTCCAGAAGGATGTTACGGCAAAGTTATGGCTGAAGCAAATCTTTCGACCGAATAGGAAGGGTTTTGTTGAAGATTAATTTCTTTTTACCGTTTGAATTTTAAATTTCCGTGTGCAGGAAATTGCATGAGGAATTACGATGCTGCCACGTGTCACGCAGAGGCTTAA ATGAGCGATCCGCCTAGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGAGAGCAGCGTAGACAGCAAAATCAAATGGCTGACGTGCCGCATCTACCGCAGGGTCCTGAAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGCTTACCACATTGTATCCAAATGCAAACATTTTACAATGGATTAAACGCGGTAACTCAAGGTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTGGCAAAAACTTTTAACGAAGCCTATGAAATTTTAGAAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAGAGGCACAAATAAAAAGGTTAAGAGTGTATTAGAAGTTGATGGTGTGTCCACCATTAGGGCTGATCTTGCAATGATTGCTAACGCTCTTAAGAATGTGACAGTGATTAGTCATCAACAGCCGCCAGTTGTGGAGCCTGCTGCAGTGGTATTGCCCCAGCAAAATAAGCAGGCTTTGCCCCAGCAGAATTCGGGGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGACGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTTGAATTGCAAGTGGGACAGCTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCTTTCAGATACTGAACACCCAAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAAAGAAAAGGGCCTAGTAAAACCCAGGATACAGATGGTAATTGTGATAGAAATGTTGTTGTTGAGAAAGAGTTGGAGTCTGGTCAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGAAATTGCATGAGGAATTACGATGCTGCCACGTGTCACGCAGAGGCTTAA ATGAGCGATCCGCCTAGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGAGAGCAGCGTAGACAGCAAAATCAAATGGCTGACGTGCCGCATCTACCGCAGGGTCCTGAAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGCTTACCACATTGTATCCAAATGCAAACATTTTACAATGGATTAAACGCGGTAACTCAAGGTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTGGCAAAAACTTTTAACGAAGCCTATGAAATTTTAGAAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAGAGGCACAAATAAAAAGGTTAAGAGTGTATTAGAAGTTGATGGTGTGTCCACCATTAGGGCTGATCTTGCAATGATTGCTAACGCTCTTAAGAATGTGACAGTGATTAGTCATCAACAGCCGCCAGTTGTGGAGCCTGCTGCAGTGGTATTGCCCCAGCAAAATAAGCAGGCTTTGCCCCAGCAGAATTCGGGGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGACGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTTGAATTGCAAGTGGGACAGCTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCTTTCAGATACTGAACACCCAAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAAAGAAAAGGGCCTAGTAAAACCCAGGATACAGATGGTAATTGTGATAGAAATGTTGTTGTTGAGAAAGAGTTGGAGTCTGGTCAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGAAATTGCATGAGGAATTACGATGCTGCCACGTGTCACGCAGAGGCTTAA MSDPPRVRFELDPEIERTFRIRRREQRRQQNQMADVPHLPQGPEGFRQLEDETFSEAWERFKELLRKCPHHGLPHCIQMQTFYNGLNAVTQGMVDASAGGALLAKTFNEAYEILERISTNSCQWSDVRGTNKKVKSVLEVDGVSTIRADLAMIANALKNVTVISHQQPPVVEPAAVVLPQQNKQALPQQNSGNSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLLSDTEHPRREGKEQVKAVTLRSGKPLEERKGPSKTQDTDGNCDRNVVVEKELESGQGAGGSNKDAGASGNCMRNYDAATCHAEA Homology
BLAST of Spg030926 vs. NCBI nr
Match: XP_030509265.1 (uncharacterized protein LOC115723943 [Cannabis sativa]) HSP 1 Score: 233.0 bits (593), Expect = 3.6e-57 Identity = 129/243 (53.09%), Postives = 171/243 (70.37%), Query Frame = 0
BLAST of Spg030926 vs. NCBI nr
Match: XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa]) HSP 1 Score: 226.9 bits (577), Expect = 2.6e-55 Identity = 130/281 (46.26%), Postives = 179/281 (63.70%), Query Frame = 0
BLAST of Spg030926 vs. NCBI nr
Match: XP_030503898.1 (uncharacterized protein LOC115719117 [Cannabis sativa]) HSP 1 Score: 223.8 bits (569), Expect = 2.2e-54 Identity = 132/295 (44.75%), Postives = 175/295 (59.32%), Query Frame = 0
BLAST of Spg030926 vs. NCBI nr
Match: XP_030505222.1 (uncharacterized protein LOC115720205 [Cannabis sativa]) HSP 1 Score: 219.5 bits (558), Expect = 4.1e-53 Identity = 127/270 (47.04%), Postives = 168/270 (62.22%), Query Frame = 0
BLAST of Spg030926 vs. NCBI nr
Match: XP_030510138.1 (uncharacterized protein LOC115724905 [Cannabis sativa]) HSP 1 Score: 218.8 bits (556), Expect = 6.9e-53 Identity = 131/293 (44.71%), Postives = 174/293 (59.39%), Query Frame = 0
BLAST of Spg030926 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46 Identity = 128/302 (42.38%), Postives = 160/302 (52.98%), Query Frame = 0
BLAST of Spg030926 vs. ExPASy TrEMBL
Match: A0A5B6VWJ0 (Retroelement pol polyprotein-like OS=Gossypium australe OX=47621 GN=EPI10_024080 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 3.7e-44 Identity = 117/297 (39.39%), Postives = 161/297 (54.21%), Query Frame = 0
BLAST of Spg030926 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-40 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of Spg030926 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 3.6e-39 Identity = 78/118 (66.10%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of Spg030926 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.8e-38 Identity = 112/303 (36.96%), Postives = 149/303 (49.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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