Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCATATGGAGCATGCCAAATTAAGTGACGAAGACTTGAAACTTGGGATGGATGACGAGAATATGGATGGTGAGCCAAATGAAGCATCGAATAAAAAGAAAAGATGGGGGGGGGGGGGACCTACTATTATGTTTGATGTAACACGCATTAGAAGTGCAGGAGAAAAGAAAAAGCTAGTGGAATACAATGATAAGGGAGTTCCCATCGGTGTCAATGGAGCTAAGTTGCAATCTGTTATTGGATCTTATTTGCATTATTATATCCCCATTACCTATGCATCCTGGAAGCATATGCCTGTTGAGTTGAAAGAAAAAATATATAACATGGTTGAGGTATGTATATTTTCATTTGATAATATTGTTGAGGTATGTATGTTTTTACTTGAATCATAACTAAGTTTTTTATGTATAGGTCGTCTTTATAATTGATAGTAGATCTAGAAGGGCCATTCTTAGAACTGCAAGCACATCACTTCGTCAATTCAAGCATTGGTTAACAACAAAATATATTATGCCATATAAAGATGAACCTCAACTTTTGTTGAATCCACTGGAAATGTACTCTTACATTGATACGAATCATTGGGTTGAGTTTGTAAGCTCGAGATTGAGTGTAGAGTTTGGGGTATGA
mRNA sequence
CACCATATGGAGCATGCCAAATTAAGTGACGAAGACTTGAAACTTGGGATGGATGACGAGAATATGGATGGTGAGCCAAATGAAGCATCGAATAAAAAGAAAAGATGGGGGGGGGGGGGACCTACTATTATGTTTGATGTAACACGCATTAGAAGTGCAGGAGAAAAGAAAAAGCTAGTGGAATACAATGATAAGGGAGTTCCCATCGGTGTCAATGGAGCTAAGTTGCAATCTGTTATTGGATCTTATTTGCATTATTATATCCCCATTACCTATGCATCCTGGAAGCATATGCCTGTTGAGTTGAAAGAAAAAATATATAACATGGTTGAGGTATGTATATTTTCATTTGATAATATTGTTGAGGTCGTCTTTATAATTGATAGTAGATCTAGAAGGGCCATTCTTAGAACTGCAAGCACATCACTTCGTCAATTCAAGCATTGGTTAACAACAAAATATATTATGCCATATAAAGATGAACCTCAACTTTTGTTGAATCCACTGGAAATGTACTCTTACATTGATACGAATCATTGGGTTGAGTTTGTAAGCTCGAGATTGAGTGTAGAGTTTGGGGTATGA
Coding sequence (CDS)
CACCATATGGAGCATGCCAAATTAAGTGACGAAGACTTGAAACTTGGGATGGATGACGAGAATATGGATGGTGAGCCAAATGAAGCATCGAATAAAAAGAAAAGATGGGGGGGGGGGGGACCTACTATTATGTTTGATGTAACACGCATTAGAAGTGCAGGAGAAAAGAAAAAGCTAGTGGAATACAATGATAAGGGAGTTCCCATCGGTGTCAATGGAGCTAAGTTGCAATCTGTTATTGGATCTTATTTGCATTATTATATCCCCATTACCTATGCATCCTGGAAGCATATGCCTGTTGAGTTGAAAGAAAAAATATATAACATGGTTGAGGTATGTATATTTTCATTTGATAATATTGTTGAGGTCGTCTTTATAATTGATAGTAGATCTAGAAGGGCCATTCTTAGAACTGCAAGCACATCACTTCGTCAATTCAAGCATTGGTTAACAACAAAATATATTATGCCATATAAAGATGAACCTCAACTTTTGTTGAATCCACTGGAAATGTACTCTTACATTGATACGAATCATTGGGTTGAGTTTGTAAGCTCGAGATTGAGTGTAGAGTTTGGGGTATGA
Protein sequence
HHMEHAKLSDEDLKLGMDDENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKLVEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDNIVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNHWVEFVSSRLSVEFGV
Homology
BLAST of Spg030263 vs. NCBI nr
Match:
KAA0053264.1 (uncharacterized protein E6C27_scaffold102G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 191.4 bits (485), Expect = 7.1e-45
Identity = 106/193 (54.92%), Postives = 131/193 (67.88%), Query Frame = 0
Query: 2 HMEHAKL-SDEDLKLGMD-DENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKL 61
HME + D+D ++G + D + G +E K K+ GPTIMFDVTR+RS GE +KL
Sbjct: 271 HMEPTIVRDDQDKEVGAEIDGLVVGVVDEHVEKPKQQRKRGPTIMFDVTRVRSEGE-RKL 330
Query: 62 VEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDN 121
VEYN+ GVPIG NG KL S IGS +HY+IPI YA+W +P +LKEKIY
Sbjct: 331 VEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKEKIY-----------T 390
Query: 122 IVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNH 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP+LL P MYSYID
Sbjct: 391 IVEAAFIIDNRSRKSILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYIDQKQ 450
Query: 182 WVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 451 WEEFVRSRLCPHF 451
BLAST of Spg030263 vs. NCBI nr
Match:
TYK03264.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 0
Query: 2 HMEHA-KLSDEDLKLGMDDENMDG----EPNEASNKKKRWGGGGPTIMFDVTRIRSAGEK 61
HME + D+D ++G +DG NE K K+ GPTIMFDVT +RS GE
Sbjct: 425 HMEPTIVIDDQDKEVG--GAEIDGLVVRVVNEHVEKPKQQRKRGPTIMFDVTHVRSEGE- 484
Query: 62 KKLVEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFS 121
+KLVEYN+ GVPIG NGAKL S IGS +HY+IPI YA+W +P ELKEKIY
Sbjct: 485 RKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKEKIY--------- 544
Query: 122 FDNIVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYID 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP LL P MYSYID
Sbjct: 545 --TIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYID 604
Query: 182 TNHWVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 605 QKQWKEFVRSRLCPHF 606
BLAST of Spg030263 vs. NCBI nr
Match:
KAA0055587.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 101/185 (54.59%), Postives = 126/185 (68.11%), Query Frame = 0
Query: 8 LSDEDLKLGMDDENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKLVEYNDKGV 67
+ D + ++G+ + N E K++R GPTIMFDVTRIRS G+ KK+V YN+ G
Sbjct: 1 MDDLNEEVGVGELNATVEETPKELKRRR----GPTIMFDVTRIRSLGD-KKVVRYNEDGA 60
Query: 68 PIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDNIVEVVFII 127
PIG NGAKL+S IGS HY++PITY SWK MP ELK+KI+ VE F+I
Sbjct: 61 PIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIF-----------TTVEAAFVI 120
Query: 128 DSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNHWVEFVSSR 187
D RSR+ +L+TA S RQFK+WLTTKYI+P+KDEPQLL P E YS+I+ NHW EFV SR
Sbjct: 121 DPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSR 169
Query: 188 LSVEF 193
LS F
Sbjct: 181 LSETF 169
BLAST of Spg030263 vs. NCBI nr
Match:
TYK30266.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 101/185 (54.59%), Postives = 126/185 (68.11%), Query Frame = 0
Query: 8 LSDEDLKLGMDDENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKLVEYNDKGV 67
+ D + ++G+ + N E K++R GPTIMFDVTRIRS G+ KK+V YN+ G
Sbjct: 1 MDDLNEEVGVGELNATVEETPKELKRRR----GPTIMFDVTRIRSLGD-KKVVRYNEDGA 60
Query: 68 PIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDNIVEVVFII 127
PIG NGAKL+S IGS HY++PITY SWK MP ELK+KI+ VE F+I
Sbjct: 61 PIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIF-----------TTVEAAFVI 120
Query: 128 DSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNHWVEFVSSR 187
D RSR+ +L+TA S RQFK+WLTTKYI+P+KDEPQLL P E YS+I+ NHW EFV SR
Sbjct: 121 DPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSR 169
Query: 188 LSVEF 193
LS F
Sbjct: 181 LSETF 169
BLAST of Spg030263 vs. NCBI nr
Match:
KAA0046884.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 0
Query: 2 HMEHA-KLSDEDLKLGMDDENMDG----EPNEASNKKKRWGGGGPTIMFDVTRIRSAGEK 61
HME + D+D ++G +DG NE K K+ GPTIMFDVT +RS GE
Sbjct: 425 HMEPTIVIDDQDKEVG--GAEIDGLVVRVVNEHVEKPKQQRKRGPTIMFDVTHVRSEGE- 484
Query: 62 KKLVEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFS 121
+KLVEYN+ GVPIG NGAKL S IGS +HY+IPI YA+W +P ELKEKIY
Sbjct: 485 RKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKEKIY--------- 544
Query: 122 FDNIVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYID 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP LL P MYSYID
Sbjct: 545 --TIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYID 604
Query: 182 TNHWVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 605 QKQWKEFVRSRLCPHF 606
BLAST of Spg030263 vs. ExPASy TrEMBL
Match:
A0A5A7UDE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00580 PE=3 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 106/193 (54.92%), Postives = 131/193 (67.88%), Query Frame = 0
Query: 2 HMEHAKL-SDEDLKLGMD-DENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKL 61
HME + D+D ++G + D + G +E K K+ GPTIMFDVTR+RS GE +KL
Sbjct: 271 HMEPTIVRDDQDKEVGAEIDGLVVGVVDEHVEKPKQQRKRGPTIMFDVTRVRSEGE-RKL 330
Query: 62 VEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDN 121
VEYN+ GVPIG NG KL S IGS +HY+IPI YA+W +P +LKEKIY
Sbjct: 331 VEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKEKIY-----------T 390
Query: 122 IVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNH 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP+LL P MYSYID
Sbjct: 391 IVEAAFIIDNRSRKSILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYIDQKQ 450
Query: 182 WVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 451 WEEFVRSRLCPHF 451
BLAST of Spg030263 vs. ExPASy TrEMBL
Match:
A0A5D3E302 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00200 PE=3 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 101/185 (54.59%), Postives = 126/185 (68.11%), Query Frame = 0
Query: 8 LSDEDLKLGMDDENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKLVEYNDKGV 67
+ D + ++G+ + N E K++R GPTIMFDVTRIRS G+ KK+V YN+ G
Sbjct: 1 MDDLNEEVGVGELNATVEETPKELKRRR----GPTIMFDVTRIRSLGD-KKVVRYNEDGA 60
Query: 68 PIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDNIVEVVFII 127
PIG NGAKL+S IGS HY++PITY SWK MP ELK+KI+ VE F+I
Sbjct: 61 PIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIF-----------TTVEAAFVI 120
Query: 128 DSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNHWVEFVSSR 187
D RSR+ +L+TA S RQFK+WLTTKYI+P+KDEPQLL P E YS+I+ NHW EFV SR
Sbjct: 121 DPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSR 169
Query: 188 LSVEF 193
LS F
Sbjct: 181 LSETF 169
BLAST of Spg030263 vs. ExPASy TrEMBL
Match:
A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 0
Query: 2 HMEHA-KLSDEDLKLGMDDENMDG----EPNEASNKKKRWGGGGPTIMFDVTRIRSAGEK 61
HME + D+D ++G +DG NE K K+ GPTIMFDVT +RS GE
Sbjct: 425 HMEPTIVIDDQDKEVG--GAEIDGLVVRVVNEHVEKPKQQRKRGPTIMFDVTHVRSEGE- 484
Query: 62 KKLVEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFS 121
+KLVEYN+ GVPIG NGAKL S IGS +HY+IPI YA+W +P ELKEKIY
Sbjct: 485 RKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKEKIY--------- 544
Query: 122 FDNIVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYID 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP LL P MYSYID
Sbjct: 545 --TIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYID 604
Query: 182 TNHWVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 605 QKQWKEFVRSRLCPHF 606
BLAST of Spg030263 vs. ExPASy TrEMBL
Match:
A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 108/196 (55.10%), Postives = 129/196 (65.82%), Query Frame = 0
Query: 2 HMEHA-KLSDEDLKLGMDDENMDG----EPNEASNKKKRWGGGGPTIMFDVTRIRSAGEK 61
HME + D+D ++G +DG NE K K+ GPTIMFDVT +RS GE
Sbjct: 425 HMEPTIVIDDQDKEVG--GAEIDGLVVRVVNEHVEKPKQQRKRGPTIMFDVTHVRSEGE- 484
Query: 62 KKLVEYNDKGVPIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFS 121
+KLVEYN+ GVPIG NGAKL S IGS +HY+IPI YA+W +P ELKEKIY
Sbjct: 485 RKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKEKIY--------- 544
Query: 122 FDNIVEVVFIIDSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYID 181
IVE FIID+RSR++IL+TA T+ RQFKHWLT KYI+P+K+EP LL P MYSYID
Sbjct: 545 --TIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYID 604
Query: 182 TNHWVEFVSSRLSVEF 193
W EFV SRL F
Sbjct: 605 QKQWKEFVRSRLCPHF 606
BLAST of Spg030263 vs. ExPASy TrEMBL
Match:
A0A5A7ULY3 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00690 PE=3 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 101/185 (54.59%), Postives = 126/185 (68.11%), Query Frame = 0
Query: 8 LSDEDLKLGMDDENMDGEPNEASNKKKRWGGGGPTIMFDVTRIRSAGEKKKLVEYNDKGV 67
+ D + ++G+ + N E K++R GPTIMFDVTRIRS G+ KK+V YN+ G
Sbjct: 1 MDDLNEEVGVGELNATVEETPKELKRRR----GPTIMFDVTRIRSLGD-KKVVRYNEDGA 60
Query: 68 PIGVNGAKLQSVIGSYLHYYIPITYASWKHMPVELKEKIYNMVEVCIFSFDNIVEVVFII 127
PIG NGAKL+S IGS HY++PITY SWK MP ELK+KI+ VE F+I
Sbjct: 61 PIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIF-----------TTVEAAFVI 120
Query: 128 DSRSRRAILRTASTSLRQFKHWLTTKYIMPYKDEPQLLLNPLEMYSYIDTNHWVEFVSSR 187
D RSR+ +L+TA S RQFK+WLTTKYI+P+KDEPQLL P E YS+I+ NHW EFV SR
Sbjct: 121 DPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSR 169
Query: 188 LSVEF 193
LS F
Sbjct: 181 LSETF 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0053264.1 | 7.1e-45 | 54.92 | uncharacterized protein E6C27_scaffold102G00580 [Cucumis melo var. makuwa] | [more] |
TYK03264.1 | 1.6e-44 | 55.10 | transposase [Cucumis melo var. makuwa] | [more] |
KAA0055587.1 | 1.6e-44 | 54.59 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
TYK30266.1 | 1.6e-44 | 54.59 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
KAA0046884.1 | 1.6e-44 | 55.10 | transposase [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UDE2 | 3.5e-45 | 54.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E302 | 7.7e-45 | 54.59 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TUX7 | 7.7e-45 | 55.10 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE... | [more] |
A0A5D3BVS7 | 7.7e-45 | 55.10 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE... | [more] |
A0A5A7ULY3 | 7.7e-45 | 54.59 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |