Spg030078 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030078
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DUF4228 domain-containing protein
Location	scaffold6: 9068195 .. 9068860 (+)
RNA-Seq Expression	Spg030078
Synteny	Spg030078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACTGTTTGTTCGGCGGAGGGTCGGGGGAGATTCAGGGAAAAATCAAGGTAATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGACGAGTTTCCCGGCTACGGGATATTCAAAAGCCACGATCTTTTCTGGAACCCACTGCCGCACGACGAGGAGCTGCTGCCGGGAAAGTCGTACTACTTGCTTCCGAGAAACAGGGGAAGGAACAGGGGAGATGGGGAGGTGGGGATGGGGATCATAAGGGCGCGTGAGGGGCACGTGAGGTCGAACAGCGTGCCGGAGGCGGCGGCGGCGGCGGCGATGGCGCCGTACAGAATGTCGTTTGATTACCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTGTTCTCGAGGTGCAGTGAGAAGAATGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGAGATTGGTGGAGATTTTGGAGGAAGAAGGTCACACGCAGGAGTTGATTGAGAGTGTGAGGACTGTGGCTAAATGTGGAAGCACTAGCACAAGCAGCAGCAGCTTCTCCTCGTCCATGGCGTTTTCAGATCAGTGGAGTTTGTCGACCACGACTGCTAATGCCACTCCAAGTGCTTCTTCTAAAAGCGCCGGCTTTCTGGAGATTTAA

mRNA sequence

ATGGGCAACTGTTTGTTCGGCGGAGGGTCGGGGGAGATTCAGGGAAAAATCAAGGTAATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGACGAGTTTCCCGGCTACGGGATATTCAAAAGCCACGATCTTTTCTGGAACCCACTGCCGCACGACGAGGAGCTGCTGCCGGGAAAGTCGTACTACTTGCTTCCGAGAAACAGGGGAAGGAACAGGGGAGATGGGGAGGTGGGGATGGGGATCATAAGGGCGCGTGAGGGGCACGTGAGGTCGAACAGCGTGCCGGAGGCGGCGGCGGCGGCGGCGATGGCGCCGTACAGAATGTCGTTTGATTACCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTGTTCTCGAGGTGCAGTGAGAAGAATGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGAGATTGGTGGAGATTTTGGAGGAAGAAGGTCACACGCAGGAGTTGATTGAGAGTGTGAGGACTGTGGCTAAATGTGGAAGCACTAGCACAAGCAGCAGCAGCTTCTCCTCGTCCATGGCGTTTTCAGATCAGTGGAGTTTGTCGACCACGACTGCTAATGCCACTCCAAGTGCTTCTTCTAAAAGCGCCGGCTTTCTGGAGATTTAA

Coding sequence (CDS)

ATGGGCAACTGTTTGTTCGGCGGAGGGTCGGGGGAGATTCAGGGAAAAATCAAGGTAATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGACGAGTTTCCCGGCTACGGGATATTCAAAAGCCACGATCTTTTCTGGAACCCACTGCCGCACGACGAGGAGCTGCTGCCGGGAAAGTCGTACTACTTGCTTCCGAGAAACAGGGGAAGGAACAGGGGAGATGGGGAGGTGGGGATGGGGATCATAAGGGCGCGTGAGGGGCACGTGAGGTCGAACAGCGTGCCGGAGGCGGCGGCGGCGGCGGCGATGGCGCCGTACAGAATGTCGTTTGATTACCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTGTTCTCGAGGTGCAGTGAGAAGAATGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGAGATTGGTGGAGATTTTGGAGGAAGAAGGTCACACGCAGGAGTTGATTGAGAGTGTGAGGACTGTGGCTAAATGTGGAAGCACTAGCACAAGCAGCAGCAGCTTCTCCTCGTCCATGGCGTTTTCAGATCAGTGGAGTTTGTCGACCACGACTGCTAATGCCACTCCAAGTGCTTCTTCTAAAAGCGCCGGCTTTCTGGAGATTTAA

Protein sequence

MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPHDEELLPGKSYYLLPRNRGRNRGDGEVGMGIIRAREGHVRSNSVPEAAAAAAMAPYRMSFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI

Homology

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BLAST of Spg030078 vs. NCBI nr
Match: XP_038902281.1 (uncharacterized protein LOC120088913 [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 6.5e-111
Identity = 214/222 (96.40%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRGDGEVG-MGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF 120
           +EELLPGKSYYLLPRNRGRNRG+ E G MGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGEEEEGEMGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF 120

Query: 121 DYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG 180
           DYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG
Sbjct: 121 DYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG 180

Query: 181 STSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           STST SSSFSSSMAFSDQWSLSTTTANATPSASSKS G LEI
Sbjct: 181 STST-SSSFSSSMAFSDQWSLSTTTANATPSASSKSGGLLEI 221

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BLAST of Spg030078 vs. NCBI nr
Match: KAA0044818.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 208/223 (93.27%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRGDGE-VGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRMS 120
           +EELLPGKSYYLLPRNRGRNRG G+   MGIIRAREGHVRSNSVPEAAAA AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGGDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           GSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 GSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

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BLAST of Spg030078 vs. NCBI nr
Match: XP_008452047.1 (PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 210/224 (93.75%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRG--DGEVGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRM 120
           +EELLPGKSYYLLPRNRGRNRG  DGE  MGIIRAREGHVRSNSVPEAAAA AAMAPYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGE-EMGIIRAREGHVRSNSVPEAAAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
           SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           CGSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 CGSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

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BLAST of Spg030078 vs. NCBI nr
Match: XP_004146558.1 (uncharacterized protein LOC101218947 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 3.1e-105
Identity = 208/223 (93.27%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNR-GDGEVGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRMS 120
           +EELLPGKSYYLLPRNRGRNR G+  V MGIIRAREGHVRSNSVPEAAAA AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           GSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 GSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

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BLAST of Spg030078 vs. NCBI nr
Match: XP_023552343.1 (uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 209/224 (93.30%), Postives = 212/224 (94.64%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRGDGEVG-MGIIRAREGHVRSNSVPEA-AAAAAMAPYRMS 120
           +EELLPGKSYYLL RNRGRNRG+ E G MGIIRAREGHVRSNSVPEA AAAA MAPYRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATAAAAGMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
           FDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           CGSTST SSSFSSSMAFSD WSLS+TTANATPSASSKS G LEI
Sbjct: 181 CGSTST-SSSFSSSMAFSDHWSLSSTTANATPSASSKSGGLLEI 223

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BLAST of Spg030078 vs. ExPASy TrEMBL
Match: A0A5A7TPJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001090 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 208/223 (93.27%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRGDGE-VGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRMS 120
           +EELLPGKSYYLLPRNRGRNRG G+   MGIIRAREGHVRSNSVPEAAAA AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGGDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           GSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 GSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Spg030078 vs. ExPASy TrEMBL
Match: A0A5D3D1S5 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004760 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 210/224 (93.75%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRG--DGEVGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRM 120
           +EELLPGKSYYLLPRNRGRNRG  DGE  MGIIRAREGHVRSNSVPEAAAA AAMAPYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGE-EMGIIRAREGHVRSNSVPEAAAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
           SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           CGSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 CGSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Spg030078 vs. ExPASy TrEMBL
Match: A0A1S3BSZ8 (uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 210/224 (93.75%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRG--DGEVGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRM 120
           +EELLPGKSYYLLPRNRGRNRG  DGE  MGIIRAREGHVRSNSVPEAAAA AAMAPYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGE-EMGIIRAREGHVRSNSVPEAAAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
           SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 SFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           CGSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 CGSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Spg030078 vs. ExPASy TrEMBL
Match: A0A0A0KUU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 208/223 (93.27%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNR-GDGEVGMGIIRAREGHVRSNSVPEAAAA-AAMAPYRMS 120
           +EELLPGKSYYLLPRNRGRNR G+  V MGIIRAREGHVRSNSVPEAAAA AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           GSTST SSSFSSSMAFSDQWSLST TANATPS SSKS G LEI
Sbjct: 181 GSTST-SSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Spg030078 vs. ExPASy TrEMBL
Match: A0A6J1JCF7 (uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 206/223 (92.38%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLPGKSYYLLPRNRGRNRGDGEVG-MGIIRAREGHVRSNSVPEA-AAAAAMAPYRMS 120
           +EELLPGKSYYLL RNRGRNRG+ E G MG+IRAREGHVRSNSVPEA AAAA MA YRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMS 120

Query: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
           FDYQGVLRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSSSSFSSSMAFSDQWSLSTTTANATPSASSKSAGFLEI 222
           GSTST SSSFSSSMAFSD WSLS+TTANATPSAS+KS G LEI
Sbjct: 181 GSTST-SSSFSSSMAFSDHWSLSSTTANATPSASAKSGGLLEI 222

[Close]

BLAST of Spg030078 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-34
Identity = 94/209 (44.98%), Postives = 122/209 (58.37%), Query Frame = 0


Query: 1   MGNCLFGG-GSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLP 60
           MGNCLFGG G  E    IKVI S+GG++E  SP+T G ++  F G+ +F + DL W PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HDEELLPGKSYYLLPRNRGRNRGDGEVGMGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF 120
           HD  L+PG+SYYL P     N    E+   +      HVRSNS     + +A+ PYRMS 
Sbjct: 61  HDHLLVPGQSYYLFP-----NIVSDELKTFV---GSCHVRSNS----ESLSAITPYRMSL 120

Query: 121 DY-QGVLRRSQTEVFSRCS----------------EKNGGVWKVKLVISPKRLVEILEEE 180
           DY   VL+RS T+VFSR S                   G +WKV L+I+ + L++IL E+
Sbjct: 121 DYNHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSED 180

Query: 181 GHTQELIESVRTVAKCGSTSTSSSSFSSS 192
           G T ELIESVR VAK G TS+ +SS S +
Sbjct: 181 GRTNELIESVRAVAK-GETSSITSSSSEN 196

[Close]

BLAST of Spg030078 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-24
Identity = 87/218 (39.91%), Postives = 110/218 (50.46%), Query Frame = 0


Query: 1   MGNCLF--GGGSGEIQGK----IKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLF 60
           MGNC+F   GGS ++  K    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  WN--PLPHDEELLPGKSYYLLPRNRGRNRGDGEVGMGIIRAREGHVRSNSVPEAAAAAAM 120
            +  PL H EEL PG  YYLLP +                             AAA A +
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLS---------------------------SSAAATAQL 120

Query: 121 -------APYRMSFDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHT 180
                   PYRMSF         +T + +  S    GVWKV+LVISP++L EIL E+  T
Sbjct: 121 DSSDQLSTPYRMSF--------GKTPIMAALSGGGCGVWKVRLVISPEQLAEILAEDVET 180

Query: 181 QELIESVRTVAKCGSTSTSSSSFSSSMAFSDQWSLSTT 204
           + L+ESVRTVAKCG           S A SDQ S++++
Sbjct: 181 EALVESVRTVAKCGGYGCGGG--VHSRANSDQLSVTSS 181

[Close]

BLAST of Spg030078 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 5.7e-04
Identity = 35/112 (31.25%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGK-IKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLP 60
           MGNCL       ++ K IK++  +G ++E   PI+V  I  +F G+ I  SH+     L 
Sbjct: 1   MGNCLV------MEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSI--SHNN--THLL 60

Query: 61  HDEELLPGKSYYLLPRNRGRNRGDGEVGMG---------IIRAREGHVRSNS 103
            D +LL G+ YYLLP    + + + +V            ++R  E    SNS
Sbjct: 61  PDAKLLSGRLYYLLPTTMTKKKVNKKVTFANPEVEGDERLLREEEDSSESNS 102

The following BLAST results are available for this feature:

BLAST of Spg030078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902281.1	6.5e-111	96.40	uncharacterized protein LOC120088913 [Benincasa hispida]	[more]
KAA0044818.1	2.2e-106	93.27	DUF4228 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_008452047.1	2.8e-106	93.75	PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF42...	[more]
XP_004146558.1	3.1e-105	93.27	uncharacterized protein LOC101218947 [Cucumis sativus]	[more]
XP_023552343.1	1.6e-104	93.30	uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg030078 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPJ8	1.1e-106	93.27	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3D1S5	1.4e-106	93.75	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BSZ8	1.4e-106	93.75	uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=...	[more]
A0A0A0KUU6	1.5e-105	93.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1	[more]
A0A6J1JCF7	1.3e-104	92.38	uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212...	[more]

BLAST of Spg030078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64700.1	2.4e-34	44.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G61920.1	1.3e-24	39.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G03890.1	5.7e-04	31.25	unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..161 e-value: 3.2E-17 score: 63.5
None	No IPR available	PANTHER	PTHR33148:SF48	DUF4228 DOMAIN PROTEIN	coord: 1..205
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030078.1	Spg030078.1	mRNA