Spg028825 (gene) Sponge gourd (cylindrica) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTCCACGACCAAGGAGGAGATGGATCGAAAGCGTCGCAAGGAGCTGTATACGGAGCTGCAGACCATACCGGGAGTTTCGTTGGAGGACGGCTTAGTCATCGCACGGGCTTTACTGGCTGATTCGAGCATGCTGACACACTTCATGGACTTCCCTCCAGAGTGGAAGTATGACTATTGCATGCAGGTGCTTGGTAGGGCACCTCGACAACCGAGTCAGCCCTGATCCTCCCCATTCTGCAGCCGAAGACTTGACGCTACCCATCTTATGTTTTTATGCAATCCCACTTTATTTTGTTCAAACTATTTAATCTTCTTTTAGACTGTTGTTATCAACTCTTCAATTTTCTTACTTTATGTCATGTTGGTTGATGTATGATCGGATGTACGCATTTTGGAACTTCATTATGAATGCTACTATGATATTTCTTATTCCTACACATTCAAATGTGTTCAAATATTTCATGTCTTGAGTAAAAAAAAATTTTGCACACATTATTATATTGTTTAAACCTTTTCAAATGGGTGAAAAAATATCTGAGTGTGGGAAAGAAAAAAAAAACAGTTTAGAAAAAGACAGCAATTACGATTCCAGTCCAATTACAACCCTGTAATCTAAACATAGGCATCATACCAAATACAGCGCACCAAACACAAGCATTTGGATTTCCAGTGATTCAGATTCCCTGTAATCCAGATTACATTCCCTCCCTATATATATATATATATATATATATATAGTTCTTAACAGGTCTCTAAACTTTAAAAAACCAAGAAACAAACTTGATGAACTTATAAATATTGTGTCTATAACTATATATATATTCAACTTTAGTTCTTAACGAGACTCTAAACTTTAAAAAACCAAGAAACAAACTTGATGAACTTATAAATATTGTGACTAATAGTTATATTGAACTTAGTTTGGATTTTAGGTATAATATGAGTCTAAACTTTTAACTTTGTGTCTAGTAAGTCTATAAATTAAAAAAAAAAAAAAAAAAAAACCGAATAGATCCTTTCAAAATGTAAGGACTAAATATACACAAACTCAAACATGAAGGAAAAAAACAATAAGTACTATACTTGTAGTTTAACTTAATTTTTTTCAAAGTTTTAAGAAAATCTTTAAAATTTGAAGTACCAAACTTGAGAAAATCTTAGGACAAAGTTCACCAATAATGTAGTTAAAAAAAAATGACAAAATTAGAGTAGTTTTGAAAAAATTAATTTTAATAATGTAAATAAAAAAAACAAATTATAAATTTGAGGTAAGAGAGAAAAGTATTGACAAATGTAGAGTTGCTGCCAACAATGAACTCGTGTACCTCGTACGCGATTTAGGGCGGTCTACGTGGCGGTGACGAGGTGGTAAAAATCGTGTACATCGTACACGAGTTCGCAAAGAAATCGTGTACGATGTACACGATTTCTATATTTGGAAATCGCGTACCACGTACACGATTTCCTTATTTGGAAACTCGCGTACCACGTACACGATTTCCATATTTGGAAATTCCTTTTTTAATATCCATATTTTTTTCCTTTTATATCTATAATAATATGTTATATATATAAATTTATGTTTAACTTTGTAACTTTTCTCGCCCATTAAGGAAACAACCACTTTCTTAGTCCTCTCCCTATTTAAGAGTGGTAGGGTAAATGAATCAATGATCAAAATTCCAATGATTTTGCTAGACAATTTTTTTTATACAATTAGTTTTTCTAAAATATATGTTTTTTTTTATATTTATATTTTATATATTTTTCTGTGTAAAATTTAAAAAAATAAAAAAAAAATTAAAGAGAAAAATTAACTAATTTACAACCGTATTCAACATTTACTAAACATTAAAATAAGGTATATATATATATTGCAAATTTTAAATAATATATAAAACAAATGACAAAAAAAAAAGCAAACAACCAGTTTTGATCCCTAGCACTCTAGAATCTTTACTAAAATTTTAACCACTGAACCAATACAATGCTTTGAAGTAAGAGTTCACAAAAGTTTTATTTATCCTTACTGAACTCGTGTACATGGTACACGAGTTCGACGTGGAACTCACGTACACCGTACGCGAGTTTTCTGTTTTTGGTGCGTGTTTCTCCACGGTGGCACCACTTGGAGACGTGTCATGTAAATCGTGTACCGTGTACACGATTTACACTTGCAATCGTGTACCAGGGTCACGATTTAGCTAAAACGTGACCAATGTACACGATTTAGCTAAAACGTGACCAATGTACACGATTTAGCTATCCCAGATTTGGAATTAGTTTCAAAACTACTCTAAATTTGTTTTTTATTTTTTAAATTACATTATTTTAAAAAAAATCCAAAAAAAAAAAAAAAAGGATCGAACTAATCATGAGCAAAACAGATTTGAATATACCAAAAGAACGAAGAGATAGTAAAAATGGTAAAAGAAAAATGATGGGAAAGGAAGAAGGATGGGCTCACCATGACCTAACAGAGACAATGGCTTGGTCTTAACGATCTGCTTGGGGAAAGCGATTTCTTCGATCACTTCCACTTCACTCCCCACTGTTTCACAGAATTCCAACACCAACAAAACACACACAGAGATCCACAACAAAATCAGCCAATCGACAACGAATCAAAAGAAAAGGAAAAAAGAAAACCCTAAGTCATGCGAGGCACAAACAAAATGCAATCAATTCGAACGCCATGGACAAGAAACAACAACAGATAAAACGCCCAAATCTCACTTCAGAACACGGTTTTTCATTGAGACATTAACACAAACAGTTGATAGGCAAGAAAAGAGGAGAAGAGAAATTGCCGTGCGTAAAAACAGAGGAAAGGAAAGGAAAGAAGCCGTACTGGTTGCGATCGTGAAGGAAGAGAGGAAGTTCTTCAGCGGAAATGGGTTGAGGGATTAGATGTGGTCCACGACCAAGGAGGAGATGGATCGAAAGCGTCGCAAGGAGCTGTATACGGAGCTGCAGACCATACCGGGAGTTTCGTTGGAGGACGGCTTAGTCATCGCACGGGCTTTACTGGCTGATTCGAGCATGCTGACACACTTCATGGACTTCCCTCCAGAGTGGAAGTATGACTATTGCATGCAGTTCGACGTGGAACTCACGTACACCGTACGCGAGTTTTCTGTTTTTGGTGCGTGTTTCTCCACGGTGGCACCACTTGGAGACGTGTCATTTGATAGGCAAGAAAAGAGGAGAAGAGAAATTGCCGTGCGTAAAAACAGAGGAAAGGAAAGGAAAGAAGCCGTACTGGTTGCGATCGTGAAGGAAGAGAGGAAGTTCTTCAGCGGAAATGGGTTGAGGGATTAG ATGTGGTCCACGACCAAGGAGGAGATGGATCGAAAGCGTCGCAAGGAGCTGTATACGGAGCTGCAGACCATACCGGGAGTTTCGTTGGAGGACGGCTTAGTCATCGCACGGGCTTTACTGGCTGATTCGAGCATGCTGACACACTTCATGGACTTCCCTCCAGAGTGGAAGTATGACTATTGCATGCAGTTCGACGTGGAACTCACGTACACCGTACGCGAGTTTTCTGTTTTTGGTGCGTGTTTCTCCACGGTGGCACCACTTGGAGACGTGTCATTTGATAGGCAAGAAAAGAGGAGAAGAGAAATTGCCGTGCGTAAAAACAGAGGAAAGGAAAGGAAAGAAGCCGTACTGGTTGCGATCGTGAAGGAAGAGAGGAAGTTCTTCAGCGGAAATGGGTTGAGGGATTAG MWSTTKEEMDRKRRKELYTELQTIPGVSLEDGLVIARALLADSSMLTHFMDFPPEWKYDYCMQFDVELTYTVREFSVFGACFSTVAPLGDVSFDRQEKRRREIAVRKNRGKERKEAVLVAIVKEERKFFSGNGLRD Homology
BLAST of Spg028825 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.0 bits (175), Expect = 4.4e-09 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Spg028825 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 3.7e-08 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of Spg028825 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-04 Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Spg028825 vs. ExPASy TrEMBL
Match: A0A5A7VG45 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00220 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.1e-09 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Spg028825 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of Spg028825 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04 Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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