
Spg023538 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCACAGGCATTGTATCTGAGGTTGGAGAAAGAATAATAGCAGTTGATTTTCTTTGTCGATAGCTTTGTGGAATGGCAGATAAATCATGTATCAAGAGGCTTCAGAAGGAATATAGAGCTCTTTGTAAAGTATGTGCCTCTGTTTTTGTTTTGCTTTGTTTTTTTTTTCTTTGAAATGATACTGTTACAATGCATGGATTTACCGGATAAATAATTTTTTGTCCAATCGTGACAATGTAACGTTAGATTGGTGTTTGTCTCATGGCTGGTTTCACAAGTGAAATTTTATATTATTATTTGAGAAACTGAATGTTCTAACGCTTGCTTTGCATTCTTCATGCTGAAATGCTGACATATACTTTTGTATTTGTCCACCAATTGGTGCTGACTCTGCTATTTGTTAATTTTTAGGAGCCTGTTTCACACATTGTTGCTCGTCCTTCTCCCAGTGACATTCTTGAGTGGCGTAAGTTTGTTCCTATCGATATCGTTTTGGTGTTAGTCATGGAGCTCCTAAATTTTGCGTGCATGTAGGAAACGATGGATTTTTGAGGTTGACTTCAGTCTAGTTTGTAACTGATGCAGACTGTAAAATGACGTATTATAATTTTGTGTGGAAAGATTGAGAAATAACTGCTAGGACATTGTGATGTTGAAAAATGGTGAAATTGTGAGAGTTCTTGGCTGACTGGAAAAGTTGAGGTCTACAGTTTTTTCATTGCTTAGAATAGCACGTAGTGTTAGTAATATGTTGGGACTTGGAAGTCTGTGAAGCATTGCTTGCTTGTTTTATGGCATAATTAGATTCTTATTTTTCTTAACTTTTTGTATCTTGTAAGTTCCAACTACTATTGATGTGATTATTTCTCTCTTATTTGTCATGAAAATATGTGTTTTCTTTCTGCCTATCATTTAGACATTTTAGTTTGCATATTAAATGTTGTCCCATTTCCTCATAATAAATAAATAAATATTGTCCCATTTCAGATTATGTTTTGGAGGGAAGTGAGGGGACTCCTTTTGCAGGTGAGTTTGTTTTTCTTTTTCCCCTTGTATTACACCCTGGACACTTCTCTTTTCAATTCAATTCTTGGTTTCCTTTCATGATTTTCTTCTTTAAGATTACTCTAATTTTTCTCTTTGATTTACACTGGGATACCAACTTCTTTTTTCTTAGCATTATTATTATTTTTATGGAAATCATTTTAAATCTTTGTTAGGTGGGTACTACCATGGAAAGATTAAATTTCCCCCAGAGTATCCATACAAACCTCCGGGAATTAGGTATGCTTCTTGGATATGTTTAATAATCTAAAAAATATTTGGGAAGAGATTTTTATAAAACATTACCTAGCTTTCTTATCCGCTCATTTTTACTGTGATTTCTGATACTACTACGATTCCTTGTAGCATGATCACCCCAAATGGTCGGTTCATGACACAGAAGAAAATTTGCTTATCTATGAGTGACTGTAAGTTTTTGGATTTTAAAGATAATCATGCTTGCTTGTCTGTAGAAATGTTTCTAAATGACATGATCTGTCTGCAGTTCACCCGGAAAGTTGGAATCCTATGTGGTCCGTGTCGAGGTGAGCATAATTCTTTTCATTTTTCTCCCTGAGGTGTTACAATTTCTTTGTAGTACCCGTGTTTTCTTTTTCTGTTAAAATTTTCTTGAAGTTAAGAAATGGTTGCTGTGTATGTGACTAACTTTTCTCATGGTGCTTTTCAACCTTTGCTTTCTAACACTTGCAGCATTCTAACCGGGCTTCTTTCATTCATGGTGAGTACATTTTGATTTTGGCTCTTGGCTCATTTTGCATATGGTTGTCTAATAGAAGATGGCTGCTTTTGTGCCTTTATCTGTTCTTATCATCTATAAATTTTGAGAGATGATCTACTTTCTTATGTAGATGGACAACAGTCCTACTACTGGCAGCGTCAATACTACTGCTGCCGAGAAGGAACGCTTGGCAAAGGCTTCTCTTGCATTCAATTGTAAAAAGTAAGTTATTGCGCCCACTGTGAGGATTTTTTGTCCTTGAACGTAGTTCCTCTTCTGCTGAGGTTCCATCTGTCATCCACATCTCCTTATTATGTAGGGTTAGTGAAGTTAATGACCCAGCCCATAATAATTACTGGAAATGTGGATGGCTCATCTCTATCTTTAAAAAACCATGATCTCATATTGCTTTTGGCAGTAGGGTTATTTTGACTTGTTTTCATGGAAACACGGATTCTAGAGACGTGCAACAATGATTATTCTGCTTTAGGCCGTAAAACTTGGGCGTCCTTGAGTGTGTAAATTGCAAGTTATCTTTCTTGAATTTAAAGTTCACACTTACTTTATTGGCATGTCCTTTGCGAAACCACTGTTTATTCTTTTTCTATGTCAACCCACTCATCATCAGTTTATTTTTTTAATTGTACAACTGCAATATGCTAATCCATTGCGACAAAAAAATACTTTTATTCAACAGCCCAACATTTAGAAAACTGTTCCCTGAATACGTGGAGAAATACAATCAACAGCAGCAATCGGAGCAGCTCATTGCAGAACAGGCTTCAGCAAAGCCATCAGAGGAAGGCGAAGCCAGGCAAATAATGGAGGTCAAGTCCACAGAAGAGAACATCAACAAAGCAGACAGAGAAGACATGAAAAGAAATCGGAAGCAGTCGTTCCCTACGTGGATGATGTTGCTACTCTTCTCGATCTTCGGCGTCTTAATGGCATTGCCTCTCCTCCAACCATGAAAGTGCAAGATGGAAGGTCGCATAGGTACTGATAGACAGAGACTAGTTTGTGCAAGTGAAGAATGCTCATATTTTTGCATGTATTAACATAGTGAGTGTCTGTATAGATGGTCTGGTGTCTGTGATGTGGCTTTCATCTTGCTGAGAGTCTGTTATGTTTGGAATAGTTGCTTGAAAACCAAACCCTCTTTGTTTGTCTATATATGTTTTTTTAAGTACTATTAGCTGAGTGTGACACTGGACAGGGCTCCACTGCAGGATATTGTTTCTTTTTTGCTTTTTAGATTGAAGAGAGTTCCTTGGAGCATCCCAATGTTTCGCCGTGTTTTGCGCTTCACTGC ATGGCAGATAAATCATGTATCAAGAGGCTTCAGAAGGAATATAGAGCTCTTTGTAAAGAGCCTGTTTCACACATTGTTGCTCGTCCTTCTCCCAGTGACATTCTTGAGTGGCATTATGTTTTGGAGGGAAGTGAGGGGACTCCTTTTGCAGGTGGGTACTACCATGGAAAGATTAAATTTCCCCCAGAGTATCCATACAAACCTCCGGGAATTAGCATGATCACCCCAAATGGTCGGTTCATGACACAGAAGAAAATTTGCTTATCTATGAGTGACTTTCACCCGGAAAGTTGGAATCCTATGTGGTCCGTGTCGAGCATTCTAACCGGGCTTCTTTCATTCATGATGGACAACAGTCCTACTACTGGCAGCGTCAATACTACTGCTGCCGAGAAGGAACGCTTGGCAAAGGCTTCTCTTGCATTCAATTGTAAAAACCCAACATTTAGAAAACTGTTCCCTGAATACGTGGAGAAATACAATCAACAGCAGCAATCGGAGCAGCTCATTGCAGAACAGGCTTCAGCAAAGCCATCAGAGGAAGGCGAAGCCAGGCAAATAATGGAGGTCAAGTCCACAGAAGAGAACATCAACAAAGCAGACAGAGAAGACATGAAAAGAAATCGGAAGCAGTCGTTCCCTACGTGGATGATGTTGCTACTCTTCTCGATCTTCGGCGTCTTAATGGCATTGCCTCTCCTCCAACCATGA ATGGCAGATAAATCATGTATCAAGAGGCTTCAGAAGGAATATAGAGCTCTTTGTAAAGAGCCTGTTTCACACATTGTTGCTCGTCCTTCTCCCAGTGACATTCTTGAGTGGCATTATGTTTTGGAGGGAAGTGAGGGGACTCCTTTTGCAGGTGGGTACTACCATGGAAAGATTAAATTTCCCCCAGAGTATCCATACAAACCTCCGGGAATTAGCATGATCACCCCAAATGGTCGGTTCATGACACAGAAGAAAATTTGCTTATCTATGAGTGACTTTCACCCGGAAAGTTGGAATCCTATGTGGTCCGTGTCGAGCATTCTAACCGGGCTTCTTTCATTCATGATGGACAACAGTCCTACTACTGGCAGCGTCAATACTACTGCTGCCGAGAAGGAACGCTTGGCAAAGGCTTCTCTTGCATTCAATTGTAAAAACCCAACATTTAGAAAACTGTTCCCTGAATACGTGGAGAAATACAATCAACAGCAGCAATCGGAGCAGCTCATTGCAGAACAGGCTTCAGCAAAGCCATCAGAGGAAGGCGAAGCCAGGCAAATAATGGAGGTCAAGTCCACAGAAGAGAACATCAACAAAGCAGACAGAGAAGACATGAAAAGAAATCGGAAGCAGTCGTTCCCTACGTGGATGATGTTGCTACTCTTCTCGATCTTCGGCGTCTTAATGGCATTGCCTCTCCTCCAACCATGA MADKSCIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFAGGYYHGKIKFPPEYPYKPPGISMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKERLAKASLAFNCKNPTFRKLFPEYVEKYNQQQQSEQLIAEQASAKPSEEGEARQIMEVKSTEENINKADREDMKRNRKQSFPTWMMLLLFSIFGVLMALPLLQP Homology
BLAST of Spg023538 vs. NCBI nr
Match: XP_038895346.1 (ubiquitin-conjugating enzyme E2 34-like [Benincasa hispida] >XP_038895351.1 ubiquitin-conjugating enzyme E2 34-like [Benincasa hispida] >XP_038895357.1 ubiquitin-conjugating enzyme E2 34-like [Benincasa hispida] >XP_038895365.1 ubiquitin-conjugating enzyme E2 34-like [Benincasa hispida]) HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122 Identity = 224/237 (94.51%), Postives = 230/237 (97.05%), Query Frame = 0
BLAST of Spg023538 vs. NCBI nr
Match: XP_023527881.1 (ubiquitin-conjugating enzyme E2 34-like [Cucurbita pepo subsp. pepo] >XP_023527882.1 ubiquitin-conjugating enzyme E2 34-like [Cucurbita pepo subsp. pepo] >KAG6581795.1 Ubiquitin-conjugating enzyme E2 34, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018246.1 Ubiquitin-conjugating enzyme E2 34 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 447.2 bits (1149), Expect = 8.8e-122 Identity = 227/240 (94.58%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Spg023538 vs. NCBI nr
Match: XP_022955894.1 (ubiquitin-conjugating enzyme E2 34-like [Cucurbita moschata] >XP_022955896.1 ubiquitin-conjugating enzyme E2 34-like [Cucurbita moschata]) HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-121 Identity = 226/240 (94.17%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Spg023538 vs. NCBI nr
Match: XP_022980715.1 (ubiquitin-conjugating enzyme E2 34-like [Cucurbita maxima] >XP_022980716.1 ubiquitin-conjugating enzyme E2 34-like [Cucurbita maxima] >XP_022980717.1 ubiquitin-conjugating enzyme E2 34-like [Cucurbita maxima]) HSP 1 Score: 444.1 bits (1141), Expect = 7.4e-121 Identity = 226/240 (94.17%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of Spg023538 vs. NCBI nr
Match: XP_004144451.1 (ubiquitin-conjugating enzyme E2 34 [Cucumis sativus] >XP_011651729.1 ubiquitin-conjugating enzyme E2 34 [Cucumis sativus] >KAE8650891.1 hypothetical protein Csa_001666 [Cucumis sativus]) HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120 Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy Swiss-Prot
Match: Q9SHI7 (Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana OX=3702 GN=UBC34 PE=2 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.0e-96 Identity = 176/239 (73.64%), Postives = 202/239 (84.52%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy Swiss-Prot
Match: Q9FK29 (Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana OX=3702 GN=UBC33 PE=2 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.5e-95 Identity = 174/242 (71.90%), Postives = 209/242 (86.36%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy Swiss-Prot
Match: Q2TA03 (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus OX=9913 GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 4.9e-51 Identity = 93/177 (52.54%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy Swiss-Prot
Match: Q8N2K1 (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens OX=9606 GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 202.2 bits (513), Expect = 6.4e-51 Identity = 93/177 (52.54%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy Swiss-Prot
Match: Q6P073 (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus OX=10090 GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.9e-50 Identity = 92/177 (51.98%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy TrEMBL
Match: A0A6J1GV41 (ubiquitin-conjugating enzyme E2 34-like OS=Cucurbita moschata OX=3662 GN=LOC111457743 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 9.5e-122 Identity = 226/240 (94.17%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy TrEMBL
Match: A0A6J1IXB2 (ubiquitin-conjugating enzyme E2 34-like OS=Cucurbita maxima OX=3661 GN=LOC111480001 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.6e-121 Identity = 226/240 (94.17%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy TrEMBL
Match: A0A5D3D6L3 (Ubiquitin-conjugating enzyme E2 34-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001210 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120 Identity = 218/237 (91.98%), Postives = 229/237 (96.62%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy TrEMBL
Match: A0A1S3CBV4 (ubiquitin-conjugating enzyme E2 34-like OS=Cucumis melo OX=3656 GN=LOC103499207 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.2e-120 Identity = 217/237 (91.56%), Postives = 230/237 (97.05%), Query Frame = 0
BLAST of Spg023538 vs. ExPASy TrEMBL
Match: A0A5A7UJG2 (Ubiquitin-conjugating enzyme E2 34-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001730 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.2e-120 Identity = 217/237 (91.56%), Postives = 230/237 (97.05%), Query Frame = 0
BLAST of Spg023538 vs. TAIR 10
Match: AT1G17280.1 (ubiquitin-conjugating enzyme 34 ) HSP 1 Score: 352.8 bits (904), Expect = 2.1e-97 Identity = 176/239 (73.64%), Postives = 202/239 (84.52%), Query Frame = 0
BLAST of Spg023538 vs. TAIR 10
Match: AT1G17280.2 (ubiquitin-conjugating enzyme 34 ) HSP 1 Score: 352.8 bits (904), Expect = 2.1e-97 Identity = 176/239 (73.64%), Postives = 202/239 (84.52%), Query Frame = 0
BLAST of Spg023538 vs. TAIR 10
Match: AT5G50430.1 (ubiquitin-conjugating enzyme 33 ) HSP 1 Score: 350.5 bits (898), Expect = 1.0e-96 Identity = 174/242 (71.90%), Postives = 209/242 (86.36%), Query Frame = 0
BLAST of Spg023538 vs. TAIR 10
Match: AT5G50430.2 (ubiquitin-conjugating enzyme 33 ) HSP 1 Score: 350.5 bits (898), Expect = 1.0e-96 Identity = 174/242 (71.90%), Postives = 209/242 (86.36%), Query Frame = 0
BLAST of Spg023538 vs. TAIR 10
Match: AT5G50430.3 (ubiquitin-conjugating enzyme 33 ) HSP 1 Score: 311.2 bits (796), Expect = 7.0e-85 Identity = 160/242 (66.12%), Postives = 195/242 (80.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|