Spg020613 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020613
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PMD domain-containing protein
Location	scaffold9: 18288182 .. 18291978 (-)
RNA-Seq Expression	Spg020613
Synteny	Spg020613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCCGTGTAGGCGCATGAAAAATCTGTCATAATTTAATTTAAAGCGGTAGTTAATTATTATTTCCTTACATTTTCTTTTCCTTAAAAAAGGGAACAAAATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCCTCCTCTGAATATGATGAGCTGAGTATTGTGCTATAATGGGCAGAGCAGACACAACTAAAACATGGGGATAATCTGCCTTATAAAAGCCTCGTGTCATCATCCTCCTCGAGTCAAGTTCAAGTCATTGCTAATGAGCTAGGGGAGTTTAAGGCGATTTGGGAAGGTTTAACGCCGGAAAGAAGATTGCTCTTCTCAAAGAGATACGACCATATTGCAGACCTCATGTATATTCCAGTTAATCGATTCACCATCCAGGCTTTGTTAGAATTCTGGGACCCGACCTACAGGTATTTCGCATTCCAAGATTTTGACTTGGTCCCGACCATTGAGGAGTACCACACGATGTTGAACATTAAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAAATTTCTAGTTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTCGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCCCAAACACATAAATGAAGAAAAGGGCTTGATTTTGTTAGCTTTATGCATCTACGGGATGATCTTGTATCCCAGAGTTAAAGGATATGTGGATGGCGATGTCTTGAAGCTATTCTTTAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTGTAAGTCCAACAAAGGCGGGAAGTTGAGATGTTGTGTTCCCTTACTCTATATTTGGGTGCATAGCCATTTTAAGTTCCCAGAAGATTTTGGCTGTCCAAAAATCAACTTCAGCAGCACCTGGAATCTAACAAGGAGTACAATTGCAGAATTTGGCACGACCCCATGGAACTCAAGTTTTCCAAGGAAAGAAGCATGAGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTATAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGTTGCGTCCATTATGCTCCATTGTTGGCCTTGCGACAAAGTTGGTTTAAGTAGTTCATACCAGCAACTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGAGAACAGTTAGAAGGATAAATGGCAATAGTCATTCTAAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATGAGCCTAACCTGTTAGCGACAGAGCGGAAAGAGTTAGTGGGAAGAAATCAAACATTGAAACTAGAAAATGAAAAATTACAGCAAGAGGTCAAATGTTTGATGGACCAGGTAACTCAAACTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAACGAGATAGAGATTATGTGTTGGGATTGGTGTCCTAAAACTCGTAGATAGTGAATGTTAAACGAATTATATACTTATTCGATAAAGGCGTTATCGAGACTAATTCAGTAAAGTTATTACTGAATAAAGTAAATTGCACATATAATTACCCAAATCCAATAAACTAAGATCCATGGCTATAGGATGAACTCTTGAGCTTTATGTAGAGACATAAAAGTGGATCAAGCTTGAGTAATAGCCAAAACGGTCTATAGTATAGGAATAGGGTTGGGTACCTTATTCTGGGGACACTATGAGACGCGGCCCACTTTATAGATGGTATAGACGATGTGATCCTAAATCGTCCATGTAGAGACATGCAAGTGGGGGCGTCCTATGCAATGAGTTTGCATAAGACCAGGACCAAGAAATAAGTCACTCTCGCTTTATAACACCGTTTACTGACGAGACTGACTATTTCATGTGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAGCTCCTGTTTATTCGGACTTATCCTTAGATCTGCATAGGTGAGAGTGGCTCAGTATCGCCGACTCAATAAGCCTCCCATTTCAGGGATATGAACGGGTAGATAGCTGGGGACATAGTCGTGCAAGAAGGAATTCACTCCTACCCGAATTAGGGATAGTAGAGAGGTTGTTCCCTTAAGTGCTGACTCCAGGGCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTCGGTTTATTGGTTGGACCATAAACCAATTGTTCATTAGAGGATCAGTGGGACTTAAGGAACTAGAAGTACTATAGGGGTAAAACGGCTTATTGACCTAGCTATAGCTACGAACAACCTGTGAAGGATCGACTTACTAATCATGGTTAAATCAAGTGGACAGAAATATATCTATAGTGAGGGGAGTGCAACTATCGGGCTATAGTGGAGTGCCCCGGTAGTTAACGAATGTTGGCTAGCTTGGATAATGAGATTAGTTCGGTTAGCCTCAAATCATTGGAGCCCATGATCTATAGGTCCATTAGGTCCCCCTACTAGCTCATATTGGAATTAAGCCTAGAACAAAAGATAGGAAGCTTTGAATCGTTCAAAAATCGGGAAAAAGGATATTATCGTAAATTGTGTTTGACACAATAATTTAATTATGAATTAAATTAGAAAATGAGAGATGGAGTATTTAAAAGTGTTTTGAATACCATATATATGTATTCGGAATCATATATGATTTATTGCACAAGATTAGAATGATTAATTGGATTAATCATAAGAAATCATTTTGTAATGCCTCAAAATCAATTACCTAATGTTAAATTCAATTTGGAATTGAAATGAACATTAAATTGCAAGCTTGAAATTAGATTTCAATTTGTATTTGGTGGATTTACTTGGAAATCCACTTATGCATGAACATTCAAAGTGGAAAGACAACTCACTCATGCATTGTTGCATGTCTTGTGAGATGTACACCTAGAATCCACTTGAACTTGCAAATACACCATGTGTCTTGTGTCTTGAGGCTTGGCTTTGCATGAAGAATGTCTTTAAAAGGAGCTTGAATCAGATTCAAAGGAATGAGAGCCATTTTCCTTAATGTTATGCTGCTGGAATTTGGACTCAAAGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGTTGTCCAAGGAGCATAGGAGAGGCAAACACCACAAGGAGTTCAACATAAGTGAGCTACAAAGGTTGGTGTTTTCTAAACTCTCTATTCTGTCTTTTCTAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTAATATGTACACCTTCAGTACCTTCCACTTTCGATCTTGTAATTGCTTCCGCTCTGATACCAATTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAAGACAGAATAGAGAGTATAGAAAACACCAACCTTTGTAGCTCACTTATGTTGAACTCCTTGTGGTGTTTGCCTCTCCTATGCTCCTTGGACAACCTCTAG

mRNA sequence

ATGTATATTCCAGTTAATCGATTCACCATCCAGGCTTTGTTAGAATTCTGGGACCCGACCTACAGGTATTTCGCATTCCAAGATTTTGACTTGGTCCCGACCATTGAGGAGTACCACACGATGTTGAACATTAAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAAATTTCTAGTTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTCGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCCCAAACACATAAATGAAGAAAAGGGCTTGATTTTGTTAGCTTTATGCATCTACGGGATGATCTTGTATCCCAGAGTTAAAGGATATGTGGATGGCGATGTCTTGAAGCTATTCTTTAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTATGCGGGAGCTTCCACACAGTCCCTCTATTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGAGAACAGTTAGAAGGATAAATGGCAATAGTCATTCTAAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATGAGCCTAACCTGTTAGCGACAGAGCGGAAAGAGTTAGTGGGAAGAAATCAAACATTGAAACTAGAAAATGAAAAATTACAGCAAGAGGTCAAATGTTTGATGGACCAGGTAACTCAAACTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAACGAGATAGAGATTATGTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTAATATGTACACCTTCAGTACCTTCCACTTTCGATCTTGTAATTGCTTCCGCTCTGATACCAATTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAAGACAGAATAGAGAGTATAGAAAACACCAACCTTTGTAGCTCACTTATGTTGAACTCCTTGTGGTGTTTGCCTCTCCTATGCTCCTTGGACAACCTCTAG

Coding sequence (CDS)

ATGTATATTCCAGTTAATCGATTCACCATCCAGGCTTTGTTAGAATTCTGGGACCCGACCTACAGGTATTTCGCATTCCAAGATTTTGACTTGGTCCCGACCATTGAGGAGTACCACACGATGTTGAACATTAAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAAATTTCTAGTTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTCGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCCCAAACACATAAATGAAGAAAAGGGCTTGATTTTGTTAGCTTTATGCATCTACGGGATGATCTTGTATCCCAGAGTTAAAGGATATGTGGATGGCGATGTCTTGAAGCTATTCTTTAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTATGCGGGAGCTTCCACACAGTCCCTCTATTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGAGAACAGTTAGAAGGATAAATGGCAATAGTCATTCTAAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATGAGCCTAACCTGTTAGCGACAGAGCGGAAAGAGTTAGTGGGAAGAAATCAAACATTGAAACTAGAAAATGAAAAATTACAGCAAGAGGTCAAATGTTTGATGGACCAGGTAACTCAAACTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAACGAGATAGAGATTATGTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTAATATGTACACCTTCAGTACCTTCCACTTTCGATCTTGTAATTGCTTCCGCTCTGATACCAATTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAAGACAGAATAGAGAGTATAGAAAACACCAACCTTTGTAGCTCACTTATGTTGAACTCCTTGTGGTGTTTGCCTCTCCTATGCTCCTTGGACAACCTCTAG

Protein sequence

MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLTAKRTLSKFLVVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMILYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYCEDSNEKKRQVLTSWRTVRRINGNSHSKGVTPEYLQWRIKRSKIPITTRDNVGESSNRAVDEPNLLATERKELVGRNQTLKLENEKLQQEVKCLMDQVTQTSGKLEEVERVSKNRANEIEIMCWDCSLISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSREHACFRSKIECLKCFRSSIASACVICTPSVPSTFDLVIASALIPIEGVHITHAEAIEDRKHLRHSILLLKHACSRKDRIESIENTNLCSSLMLNSLWCLPLLCSLDNL

Homology

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BLAST of Spg020613 vs. NCBI nr
Match: KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-47
Identity = 117/300 (39.00%), Postives = 171/300 (57.00%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ FWDP Y  F F   DL+PTIEEY  ML++  K  E++Y FNP+ T
Sbjct: 85  MYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPGKEREIVYFFNPKKT 144

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  ++QK +KVKG EE++  DYL ++   +++E+KGL LLALCIYG +
Sbjct: 145 TKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAV 204

Query: 121 LYPRVKGYVDGDVLKL----FFSIE-----QGVDPAIPLLAETVRALNYYAGASTQ---- 180
           ++P+ +GYVDG  +      F S+       GV+    L+   V    +           
Sbjct: 205 IFPKAEGYVDGKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLHQVWLKQFIPPTHNLQEFD 264

Query: 181 -SLYCEDSNEKKRQVLTSWRTVRRINGNSHSKGVTPEYLQWRIKRSK-IPITTRDNVGES 240
            S   ED   KKRQ + +W+++R+I    H +GVT  Y  W+  R K I   +R+ V   
Sbjct: 265 FSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERG 324

Query: 241 SNRAVDEPNLLATERKELVGRNQTLKLENEKLQQEVKCLMDQVTQTSGKLEEVERVSKNR 285
              + ++PN    +  EL  +N+ L+ ENEKL++E    MD  T    +LE+ +   KN+
Sbjct: 325 KKTSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQ 384

[Close]

BLAST of Spg020613 vs. NCBI nr
Match: KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 2.1e-47
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ FWDP Y  F F   DL+PTIEEY  ML++ EK  E++Y FNP+ T
Sbjct: 85  MYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPEKEREIVYFFNPKQT 144

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K+KG EE++  DYL ++   +++E+KGL LLALCIYG +
Sbjct: 145 TKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAV 204

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVDG V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 205 IFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 255

[Close]

BLAST of Spg020613 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-47
Identity = 131/416 (31.49%), Postives = 185/416 (44.47%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   +L+PTIEEY  ML++ EK  E++Y FNP+ T
Sbjct: 54  MYIPVNYFALRAIINFGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQT 113

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +KVKG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 114 TKRTLSKFLETVHATEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 173

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC--------- 180
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C         
Sbjct: 174 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWI 233

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 234 HSHIKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIW 293

Query: 241 ------------------------------------------------------------ 285
                                                                       
Sbjct: 294 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 353

[Close]

BLAST of Spg020613 vs. NCBI nr
Match: KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-44
Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   DL+PTIEEY  ML++ +K  E++Y FNP+ T
Sbjct: 25  MYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQT 84

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K KG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 85  TKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 144

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 145 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 195

[Close]

BLAST of Spg020613 vs. NCBI nr
Match: KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-44
Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   DL+PTIEEY  ML++ +K  E++Y FNP+ T
Sbjct: 25  MYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQT 84

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K KG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 85  TKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 144

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 145 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 195

[Close]

BLAST of Spg020613 vs. ExPASy TrEMBL
Match: A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.6e-48
Identity = 117/300 (39.00%), Postives = 171/300 (57.00%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ FWDP Y  F F   DL+PTIEEY  ML++  K  E++Y FNP+ T
Sbjct: 85  MYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPGKEREIVYFFNPKKT 144

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  ++QK +KVKG EE++  DYL ++   +++E+KGL LLALCIYG +
Sbjct: 145 TKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAV 204

Query: 121 LYPRVKGYVDGDVLKL----FFSIE-----QGVDPAIPLLAETVRALNYYAGASTQ---- 180
           ++P+ +GYVDG  +      F S+       GV+    L+   V    +           
Sbjct: 205 IFPKAEGYVDGKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLHQVWLKQFIPPTHNLQEFD 264

Query: 181 -SLYCEDSNEKKRQVLTSWRTVRRINGNSHSKGVTPEYLQWRIKRSK-IPITTRDNVGES 240
            S   ED   KKRQ + +W+++R+I    H +GVT  Y  W+  R K I   +R+ V   
Sbjct: 265 FSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERG 324

Query: 241 SNRAVDEPNLLATERKELVGRNQTLKLENEKLQQEVKCLMDQVTQTSGKLEEVERVSKNR 285
              + ++PN    +  EL  +N+ L+ ENEKL++E    MD  T    +LE+ +   KN+
Sbjct: 325 KKTSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQ 384

[Close]

BLAST of Spg020613 vs. ExPASy TrEMBL
Match: A0A5A7UWQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002420 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-47
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ FWDP Y  F F   DL+PTIEEY  ML++ EK  E++Y FNP+ T
Sbjct: 85  MYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPEKEREIVYFFNPKQT 144

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K+KG EE++  DYL ++   +++E+KGL LLALCIYG +
Sbjct: 145 TKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAV 204

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVDG V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 205 IFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 255

[Close]

BLAST of Spg020613 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-47
Identity = 131/416 (31.49%), Postives = 185/416 (44.47%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   +L+PTIEEY  ML++ EK  E++Y FNP+ T
Sbjct: 54  MYIPVNYFALRAIINFGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQT 113

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +KVKG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 114 TKRTLSKFLETVHATEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 173

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC--------- 180
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C         
Sbjct: 174 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWI 233

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 234 HSHIKFPAEFRCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIW 293

Query: 241 ------------------------------------------------------------ 285
                                                                       
Sbjct: 294 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 353

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BLAST of Spg020613 vs. ExPASy TrEMBL
Match: A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-44
Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   DL+PTIEEY  ML++ +K  E++Y FNP+ T
Sbjct: 25  MYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQT 84

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K KG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 85  TKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 144

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 145 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 195

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BLAST of Spg020613 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-44
Identity = 91/171 (53.22%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 1   MYIPVNRFTIQALLEFWDPTYRYFAFQDFDLVPTIEEYHTMLNIKEKGGEMIYCFNPQLT 60
           MYIPVN F ++A++ F DP Y  F F   DL+PTIEEY  ML++ +K  E++Y FNP+ T
Sbjct: 25  MYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQT 84

Query: 61  AKRTLSKFL-VVHLKEVQKNVKVKGVEESISADYLTELAPKHINEEKGLILLALCIYGMI 120
            KRTLSKFL  VH  E+QK +K KG EE++  DYL ++   +I+E+KGL LLALCIYG +
Sbjct: 85  TKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAV 144

Query: 121 LYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRALNYYAGASTQSLYC 171
           ++P+ +GYVD  V+KLFF +E+GV+P IP+LAET R+LNY        L C
Sbjct: 145 IFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNC 195

The following BLAST results are available for this feature:

BLAST of Spg020613 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066094.1	1.6e-47	39.00	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0060423.1	2.1e-47	54.39	uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]	[more]
KAA0036941.1	2.7e-47	31.49	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036949.1	2.1e-44	53.22	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036933.1	2.1e-44	53.22	uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]	[more]

BLAST of Spg020613 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFL0	7.6e-48	39.00	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=...	[more]
A0A5A7UWQ6	1.0e-47	54.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T5S7	1.3e-47	31.49	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5A7T6E2	1.0e-44	53.22	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=...	[more]
A0A5A7T1W2	1.0e-44	53.22	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Spg020613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..273
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 165..267 coord: 4..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020613.1	Spg020613.1	mRNA