Spg017094 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017094
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ribonuclease P protein subunit p29
Location	scaffold4: 43510900 .. 43517849 (-)
RNA-Seq Expression	Spg017094
Synteny	Spg017094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTCAGAGATTTGATATTCGATATTTATTTTAAATCTCAAAAGACCCAAATCCCTTTTAATCCATTTTAATTCCAAACCAATTGGATTGTTTTCTATTATAAATCTTTTAAAAATTAGGAGATTAAAATGTCATTAATTTGGCTAATCTAAGAATTTTTAGAACCATTTAAAATGGGTTTTCGAGTGAATTTGAAAGAGACAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAAAACAAAAACAAAGGAAAGAAAAAGAAAGCCCTAGAAATCTCTTCACTCCCATTCTTCCTTGCGTGCGCCAGAACCCCCCCCCCCCCCTCCCCCAGCTTTCTCTTCCGCCGTCGGCACTATCTCCGGCGTCCTCTCCGTGCGTAGCGGACAGTCAAGCCGGCGTCGCTCCCTCCCTCTCGTCTCTATATTGTCCAGCAAGCAACCCACGACCTTCTGCGTGATTTTCAGTCTCCCTCTCGCCTCGTGTTCGGTCCGGGTAGCAGACTCGCCGGCGCTCTCTCTCCCCTTCTCCCGCGTGTCGCCGCTTGTTCTGCCTCCTTCTCTTGTGTTTCCGTCGGCCACAGCAGGTAGGTCTCAAAATCTTCCTTCTTCTCTTTGTTTCGTGCGTAAATCTCTCTCTCTCGCTCGTGTTTGGCTAGGACCCGCGAAGAGGTCTGTCTCTCTCCCTCTCCCTCGGATTTTCGTCCTCAGCGGGACCAAGCTGCGCGATCGAATCTGACCTTTGCGAGTCTAGCGTGTTTTTCCCCTTCATTTTAGCGATTTCGGTGCGTCTTGATATTGACCCATGCTCTTTCGAACTCTAATTTGGATTACCCACTCCCTGTAGGTGCTGGTTTAGTGTTACCCAATCTTTAGATTCTGAAATTGCAGGTTTAAGCTTCTTTGAACGCCAACCAGCAACATTCTGGGCTTAAACTTGGCTATCTTCGTATACCCACTAGCCGAGCAACCTTGGAATTGATTGCTCATAGGCTAGGGGACTCAGGTTAGCGGTTTCGAAGCCTTTTGATCGCTGGACAGCACGTGTTCAGGACCATTTGTAGGCTGAACGGTAAATTCCAGCACCTACTCTTTCCTTTATTAAGTCTTTTTAGTGCTGTACATCAATTTCCCAACCCTTAGAAGTTATTGCTTGTAGTTCGGGCAGTTTAGTGTCCATTGAGGGACTCTTGGGAGAGAGATGACCCTCTCCGAAGGCTATTAGTATATTGTAGTTTCTTTTGATATTGCAATATATATCTAAGTTTGTTTCTAGTGTTCGGGTTCGTAACAAATTGATATCAAAGCATTGATTCTGGCCATGGATTGGGATCGTGTTAGGGATATTATTGAAGATACAACAATCTTTGATCAAACAAGAAGAAGAGTTGAAAGCAATTCGGCAAGGGTTCGAGGAAATAGAAAAGAATCAGGAGGTGAGGCAGATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTCAGATTTAGTGTCGCCGACGGGAAGACAAAGTTGGGGTGAAAATCAAAAAGGAAGGTTAGTAGTAGTGTCCATTGAGGGATTCTTGGGAGAGAGATAGCCCTCTCGAAAGGCTATTAGTATATTGTAGGTTTTTTTTTTGATATTGCAATATATATCTAAGTTTGTTTCTAGTGTTTGGGTTCCTAACAAATTGGTATCAGAGCATCGATTCTGGCCATGGATTGGGATCGTGTGTTAGGGATATTATTGAAGGTACAACAATCTTTGATCAAACAAGAAGAAGAGTTGAAAGCAATTCGACAAGGGTTCGAGAAAATAGAAAAGAAGCAAGAGGTTAGGCGGATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTTAGATTTAGTGTTGCCGGTGGGAAGACAAAGTTGGGGCGAAAATAAAAAAAGGAAGGTCAGAGGGCAGCAATCGAGGGGAAACCGACTTGTATTCTATCGAGAATGATGTTCGAAGCAACAACATCAGATATTCAAGGGAGATATCAACGATAGATGTCGCTGAAAACCAGAGAGAAGTGATCGATGGGAGGGGAATACCGGAGTTGGAAGAAGGGAGGTCCGCGTGCAAATTGTCGACGTTCAAAGACCGCGTGCGAATAGGCTGGAAAGATATCCGGAATGACAAAGGAAGATTTCCCAAAACCACATCATTGGCCATTATCGAGGAAGGAACGATTTAGTAGATTCAGTAGCTGCAAGTTTCGAATGAAAAGAAGAGAAGGGGATGACGGAGACCATAATCGACGATCGCTTGCGTGGCCGGAGTTGAAGACGTGGTGGAAACAACAAACTAAGGATGGAGGACAGATGGGAGTGGAGACCGACATAGACCATTACCGACAGCGAAGGTAAGCGTGGTCAAAGATGAAGCGGCGAGGACGAGGTCGACGGAAACGGAGTGTGCTGGTCGGGAAAAGATCGTTGACTCATGTGGGCTTAAACCCTAACCCTAATCACGAGAAAGTAGATGAGTCTATAAGGGGAGAAAATCAAGGGTTGGCTGGGCATGAGAATCATGAGTTGTCTAGGTATGGGCCTTCATGAGCTGAATTTGAATGGGATATTTTTAAATTGCTAGAGTGGATTTTGGGTTGGGCTGCCTTTTATTTTAAACCTGTGATTCAACCCAATTTTTTATCCTCTTCACGTGAAAGAAAGAAACAACCCTAGCTGCCTATTTTGCTATAACCCATCGTCGGCCATCACCACCTATTGTTGGGCTATCTCACCATTGTCAGCCTTTCAGCACCAACCATCATCACTCGTCGGATTCGCTCCAACTGCCACCTACCACTGCTTCACACCACCATCCACTGCTCACAGGGGGATTGAAGCAAAGGCCAACTGAGTTTCTAAAGGGTGGTTTTGTGTTTTTGGTTTCTCTATTATTAAAAAAAAGAGCCCGGTTTTGGTATTATGTTTTGTAAGCACACCTTGAGGACAAGGTGTCTTTTAAGGGCGGAGTAATGTGGGGTACTAGTATAGTATATATGGAGAATAGTATTAAGGACATATTAGTAATTAGTTAAGTAGTCTTGGATATAAATAGGGATGTTAGGGGTCCTAGAGAGGTGTGGAGAATTTTAGTAGTAGTGTCCATTGAGGGACTCTTGGGAGAGAGATAACCCTCTCGAAAGGCTATTAGTATATTGTAGTTTCTTTTGATATTGCAATATATATCTAACTTTGTTTATAGTGTTTGGGTTTCTAACAGTTTGCTTTGGTTGTTTTTCTTTCAAGTTTGAAGTATAAAAAAATTGTATCATGTTTCAGTTGGCTTGATCAGCCATCGAACTCCAATGGCGGATGGTAAAGCTTCTCAAGATCTAAGGAAACACGCTCTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCAAAAGCCGAGCTTCTTCAACAACAAAAGAAGATTAGTTCTACAGAGGAATTAAAGAAAGAAGTCAAGGGAAAAACTGCTTTGAACGATTCCTCTTCAGTTGTTTCGAGAAATCAGTATGATTCTTCAATTCTTTTGCAATCTGGAGAGAAACCCCCAAATAAAGGTCCCCTCATTATACCTATGGTTTTAATACTTTCGTTGGTGGGTCAGTGTGCATTTAGTTTGCTTATAGTTAGTTGTTTCTTTCATATGCAGATGTTGAAGAAAGTGATCCAATATATTTCTCCCTCTCAGCTGCCGTGAATGAAAATTTGATGGCTACAAATATGGATGTAAGTTGTCCTCCCTGGAAACCTAAAAGACCTGCTTGATTACGTTTTATCTTTGGTTTTATGTTTTTGAAAATTAAGCCCATAAACACTACTTCCATCCATCCATGTGTTTCTTTGTTTGTTATCTACTTTTTAAGAAATTTCAAAATCTAAGCCAAATTTTGAAAACTTGTTTTTGAGATTTTGTTAAGAATTTAGATGTGATATTAAGAAAGATGAAAATCATACCAAAGAAATTGTGAGAAAATAGGCCTCATTTTTTAAAACAGAAAACTAAAATCTGAATTGACAGAACCTAATAAACTTGTATTTTATCCAGACATGGCTTTGGGTGGTTGAAGTATCTGAAAGATAGTATTGTGGATCATGGGCGCATAATATTAAGTACGAGATCTTGGATACCCAGTTTGAGGGAAAAAAAAAAGAACGATATGTTTTTCTTGATTAATTTGAACTTACCTCATTTGCAGGTTTCTTATAAAGGAAGTGTGGTTAACAAGATTTGTCACGAGCTAAGAACTGGTGGTTACATTAAGCGGCCAAGAGAACTGAAAGTTGATGCTTGGATCCGTCTTGATAACTTTGTTCCAAAACGTGCTGGAATGACGGGCTCTCGTATGAGGGCTTTGCGGAGCAATTCAAAACGATCCAAAAGACATATGTCTATGAAGCAACATAAAAAGTGTGGAACATTGGATTTACCTTCTGACTTCCATAAGTGAGTTCCATTTATCTCTTTGGTCAAGAGAGCTTTCATCACCAGCTACCCCATTTTATCCCATATAGGATCAAATAGGAAAATGGTGATGAATGTGTCTGTTTCTCCTGAAATCAGAATTTGAGTTTAGTTGTTGATCATTATCCATCAAAAAATGAATTAGGAAGGTTATTAAGCAAAGACATGTTTATTGCACTCCATGGAGTATCCATTGAAATAGGTTTTCATTGGCTCTGTCATTGCCATTTATGTTTGACAATAAATTATTTTGCGTGTGTGTGCGTGTTTAAAAAATTCCCATGTAGGATTGAATAGGAAAATGGTGATGAAAGTGACTGTTTCTCCTGAAATTAGAATTTTAATTTACTTGTTGATCCTTGATCCTTATCCATATAAAGGGGAATTAGGAAGGCTATTGATAAAAACATGTTTATTGCATTTATGGAGTTTTAAGTTTGTTCTACCTAGCAAGCTGGGATTTGTGCTATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTGGAGAGGGATTCAGTTGAGGTTTGGTTCCTTGTTAGATATAATGATTCTCTTTGGGTATCGGTGACGCGCTTATTTTCTAATTATTCCATAGGTCTCATTATTTTGGATTGGAATCCTTTTATCTAATGGAGTCTCCCCCTTTTTTGGGTTAGTTTTTTTTGTGTCCGTGTATTCTTTCATTTATTCTCAATGAAAGTGTGATTTTTCATTAAAAAAAAAAGTTTGTTCTACATAAGCAACCATTTATATTGGTTTTTGCCATGCCACTGTCATTTATGTTTGACAATGAATTACTGTGTTTTTCTATTTCAGGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAGCTACTTGAAACAACGGCTAGGCCATGTTGGGTTAGATTTTTACTATAGTTTTCCTATTCTGCAACTCTTTCTCAAATCATATCTATTACTTTTTCACACTTATGTTGGCCCCTTTTTGTTAAATTAAATCAATGTTCTGCCTGTATTAGTGGTATGTTATCTGTTTCTTTCGGTGATCAGAGTTTCAAATCTTGCAGGCAAGATGCATTAGCTCGAAATTTTCTCATTGCAGATCTTCATGGTGCCATGATCCTAGGTAAAACCATTCTTTTCTCTGATCAACTTCTTCGCATCAATATCATATTTATATAAATTCCTTTTTCATCAAATAAACCAACGTTCACACAATGGAAGAAAGCACAAAAAGAGGTTGCACAAAACACAAGGCCCAACCAACAAGAAGGTTACAGAAAGAAGCAAAGCAAGAACAATTAGAGAATTTTGTAGAACAGTGGCACTATGACAATTAAAGTTAAATACATTAGTCCTTATCCATATGATCATATCAATATTTTTTTAGACTAGGTGCTGAAGGATTCTTCTTTTTGTTCTTTTTCCCTCCATGATTCATGTATATTGCAAATCCAACCTCTATTAGCATTAAGGTTTCAAATATCCAAATGGCATCATTGGTTTCAAACCTAGCCCCCCCCCTCCACAGAGTGGCGCCATTTGCTAAGGCCCATGGTCTATGAGCAATACACCTATTTAGAGGTCGTGTTTGAAACTTCAGGTGAGCTAATTAAGAAAAATCCGTTCTTAAATTTGGGTCCTAGGGCTGGTGCAAACTTTTTTTTTTTAAAAAAAGAATGATTGGTTTCTTATACCTGGCTGGTACTTCGGGAGAATGGGAATTTCAATGACCTATACACATCCTCAAGTTATTTCAAGCAAGTCAATATAGTAATCCTAATCTTAGTTTAAAATGGTACTAGAATAAGAGAATGAGGTTTTTATACTGAATGTCTCTCTCTCTCTCTCTCATATTAGCTATTTTATCGTTTGATATCTCTGCAGTTGCCGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGAGAAACTGCAGAAACATTTGGAATTGTGACGAAGGATGATAAGTTTCGAGGTAACTCTTCCATTTGCATCTTAAGTCTTGCATTAGTTGTTTGTGTGGATCAATTAAGTTGTAAGAATTTGGATTTCTTTGTTTGGTGGCTTTGATTTGCAGTTGTGCCAAAGAAATCTTGTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTCGGAGATAAACTTGGTTCCAGACTTCCGGGTTTGCCATCTGCTAATTCCAACAAATTATTTACATCCACCGTAAACTACTTTAGAATAGTATAAACCCCTCGAGCTCATAGAGAAATGAGTTAATTTAAGCTTGGTTTAATAACAATTTTGTTTTGTTTATTAAGAATTTCCTTCCTTTGTAATATAATAATTTAAAATTCTAAACGAAGAAATTATTACTAATTCTTCCTCCTAATTGAGCGAAAGAAAATTAATGCAAATTTTAGTTACTC

mRNA sequence

ATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTCAGATTTAGTGTCGCCGACGGGAAGACAAAGTTGGGAGCATCGATTCTGGCCATGGATTGGGATCGTGTGTTAGGGATATTATTGAAGGTACAACAATCTTTGATCAAACAAGAAGAAGAGTTGAAAGCAATTCGACAAGGGTTCGAGAAAATAGAAAAGAAGCAAGAGGTTAGGCGGATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTTAGATTTAGTGTTGCCGTTGGCTTGATCAGCCATCGAACTCCAATGGCGGATGGTAAAGCTTCTCAAGATCTAAGGAAACACGCTCTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCAAAAGCCGAGCTTCTTCAACAACAAAAGAAGATTAGTTCTACAGAGGAATTAAAGAAAGAAGTCAAGGGAAAAACTGCTTTGAACGATTCCTCTTCAGTTGTTTCGAGAAATCAGTATGATTCTTCAATTCTTTTGCAATCTGGAGAGAAACCCCCAAATAAAGATGTTGAAGAAAGTGATCCAATATATTTCTCCCTCTCAGCTGCCGTGAATGAAAATTTGATGGCTACAAATATGGATGTTTCTTATAAAGGAAGTGTGGTTAACAAGATTTGTCACGAGCTAAGAACTGGTGGTTACATTAAGCGGCCAAGAGAACTGAAAGTTGATGCTTGGATCCGTCTTGATAACTTTGTTCCAAAACGTGCTGGAATGACGGGCTCTCGTATGAGGGCTTTGCGGAGCAATTCAAAACGATCCAAAAGACATATGTCTATGAAGCAACATAAAAAGTGTGGAACATTGGATTTACCTTCTGACTTCCATAAGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAGCTACTTGAAACAACGGCTAGGCCATGTTGGGCAAGATGCATTAGCTCGAAATTTTCTCATTGCAGATCTTCATGGTGCCATGATCCTAGTTGCCGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGAGAAACTGCAGAAACATTTGGAATTGTGACGAAGGATGATAAGTTTCGAGTTGTGCCAAAGAAATCTTGTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTCGGAGATAAACTTGGTTCCAGACTTCCGGGTTTGCCATCTGCTAATTCCAACAAATTATTTACATCCACCGTAAACTACTTTAGAATAGTATAA

Coding sequence (CDS)

ATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTCAGATTTAGTGTCGCCGACGGGAAGACAAAGTTGGGAGCATCGATTCTGGCCATGGATTGGGATCGTGTGTTAGGGATATTATTGAAGGTACAACAATCTTTGATCAAACAAGAAGAAGAGTTGAAAGCAATTCGACAAGGGTTCGAGAAAATAGAAAAGAAGCAAGAGGTTAGGCGGATGGAAAGAGAACAAAAACTAAAGAAGGAAGACGAGGAAGCACAAAAGAAACGAGAGCGGGTTTACTTTAGATTTAGTGTTGCCGTTGGCTTGATCAGCCATCGAACTCCAATGGCGGATGGTAAAGCTTCTCAAGATCTAAGGAAACACGCTCTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCAAAAGCCGAGCTTCTTCAACAACAAAAGAAGATTAGTTCTACAGAGGAATTAAAGAAAGAAGTCAAGGGAAAAACTGCTTTGAACGATTCCTCTTCAGTTGTTTCGAGAAATCAGTATGATTCTTCAATTCTTTTGCAATCTGGAGAGAAACCCCCAAATAAAGATGTTGAAGAAAGTGATCCAATATATTTCTCCCTCTCAGCTGCCGTGAATGAAAATTTGATGGCTACAAATATGGATGTTTCTTATAAAGGAAGTGTGGTTAACAAGATTTGTCACGAGCTAAGAACTGGTGGTTACATTAAGCGGCCAAGAGAACTGAAAGTTGATGCTTGGATCCGTCTTGATAACTTTGTTCCAAAACGTGCTGGAATGACGGGCTCTCGTATGAGGGCTTTGCGGAGCAATTCAAAACGATCCAAAAGACATATGTCTATGAAGCAACATAAAAAGTGTGGAACATTGGATTTACCTTCTGACTTCCATAAGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAGCTACTTGAAACAACGGCTAGGCCATGTTGGGCAAGATGCATTAGCTCGAAATTTTCTCATTGCAGATCTTCATGGTGCCATGATCCTAGTTGCCGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGAGAAACTGCAGAAACATTTGGAATTGTGACGAAGGATGATAAGTTTCGAGTTGTGCCAAAGAAATCTTGTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTCGGAGATAAACTTGGTTCCAGACTTCCGGGTTTGCCATCTGCTAATTCCAACAAATTATTTACATCCACCGTAAACTACTTTAGAATAGTATAA

Protein sequence

MEREQKLKKEDEEAQKKRERVYFRFSVADGKTKLGASILAMDWDRVLGILLKVQQSLIKQEEELKAIRQGFEKIEKKQEVRRMEREQKLKKEDEEAQKKRERVYFRFSVAVGLISHRTPMADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVSYKGSVVNKICHELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPSANSNKLFTSTVNYFRIV

Homology

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BLAST of Spg017094 vs. NCBI nr
Match: XP_038906079.1 (ribonuclease P protein subunit p29 isoform X3 [Benincasa hispida])

HSP 1 Score: 506.1 bits (1302), Expect = 2.9e-139
Identity = 258/301 (85.71%), Postives = 271/301 (90.03%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVS 179
           MAD KASQDLRKHALEALERRCAAAK ELLQQQKKISSTE+LKKEVKGK+ LNDS SVVS
Sbjct: 1   MADNKASQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSISVVS 60

Query: 180 RNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVS-YKGSVVNKICHE 239
           RNQYDSSILL S  KPP+KDV ESDPIYF+LSAAVNE LMAT MDVS  +G VV++ICHE
Sbjct: 61  RNQYDSSILLPSEGKPPSKDVNESDPIYFTLSAAVNEKLMATTMDVSNNRGRVVDRICHE 120

Query: 240 LRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGT 299
           LRT GYIKR +E KVDA I LDNFVPKRAGM GSR RALRSNSKRSKRHMSM+QHKKCGT
Sbjct: 121 LRTSGYIKRSKEFKVDACILLDNFVPKRAGMIGSRKRALRSNSKRSKRHMSMRQHKKCGT 180

Query: 300 LDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAF 359
            DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG DALARN LIADLHGAMI V EC+IPAF
Sbjct: 181 FDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGPDALARNLLIADLHGAMIRVVECQIPAF 240

Query: 360 TGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPSA 419
           TG SGIMIRETAETFGIVTKDDKFRVVPKKS VFIFQWDCWKVTLLGDKL SR+P LPS+
Sbjct: 241 TGTSGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPSS 300

[Close]

BLAST of Spg017094 vs. NCBI nr
Match: KAG6580591.1 (Beta-1,4-xylosyltransferase IRX9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506.1 bits (1302), Expect = 2.9e-139
Identity = 260/310 (83.87%), Postives = 272/310 (87.74%), Query Frame = 0


Query: 112 GLISHRTPMADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTAL 171
           GLI+   PMA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  L
Sbjct: 389 GLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATL 448

Query: 172 NDSSS-VVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDV-SYKG 231
           NDSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM+TNMDV S +G
Sbjct: 449 NDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRG 508

Query: 232 SVVNKICHELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMS 291
            VV+KICHELRT GYIKR RELKVDAWI LDNFVPKRAGM GSR RAL+SNSKRSKRHMS
Sbjct: 509 RVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMS 568

Query: 292 MKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMIL 351
           MKQHKKCGT DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ADLHGAMIL
Sbjct: 569 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMIL 628

Query: 352 VAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLG 411
           V ECKIPAFTGISGIMIRETAETFGI TKD+KFRVVPKKS VFIFQWDCWK+TLLGDKL 
Sbjct: 629 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 688

Query: 412 SRLPGLPSAN 420
           SR+P LPS N
Sbjct: 689 SRIPSLPSKN 698

[Close]

BLAST of Spg017094 vs. NCBI nr
Match: KAG7017346.1 (Ribonuclease P protein subunit p29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.1 bits (1302), Expect = 2.9e-139
Identity = 260/310 (83.87%), Postives = 272/310 (87.74%), Query Frame = 0


Query: 112 GLISHRTPMADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTAL 171
           GLI+   PMA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  L
Sbjct: 77  GLINCPCPMAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATL 136

Query: 172 NDSSS-VVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDV-SYKG 231
           NDSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM+TNMDV S +G
Sbjct: 137 NDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRG 196

Query: 232 SVVNKICHELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMS 291
            VV+KICHELRT GYIKR RELKVDAWI LDNFVPKRAGM GSR RAL+SNSKRSKRHMS
Sbjct: 197 RVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMS 256

Query: 292 MKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMIL 351
           MKQHKKCGT DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ADLHGAMIL
Sbjct: 257 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMIL 316

Query: 352 VAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLG 411
           V ECKIPAFTGISGIMIRETAETFGI TKD+KFRVVPKKS VFIFQWDCWK+TLLGDKL 
Sbjct: 317 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 376

Query: 412 SRLPGLPSAN 420
           SR+P LPS N
Sbjct: 377 SRIPSLPSKN 386

[Close]

BLAST of Spg017094 vs. NCBI nr
Match: XP_023526523.1 (ribonuclease P protein subunit p29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.1 bits (1289), Expect = 9.4e-138
Identity = 257/302 (85.10%), Postives = 267/302 (88.41%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSS-VV 179
           MA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  LNDSSS VV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 180 SRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVSY-KGSVVNKICH 239
           S N YDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM+TNMDVS  +G VV+KICH
Sbjct: 61  SGNHYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSDRGRVVDKICH 120

Query: 240 ELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCG 299
           ELRT GYIKR RELKVDAWI LDNFVPKRAGM GSR RAL+SNSKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAGMIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 300 TLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPA 359
           T DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ADLHGAMILV ECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 360 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPS 419
           FTGISGIMIRETAETFGIVTKDDKFRVVPKKS VFIFQWDCWK+TLLGDKL SR+P LPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

[Close]

BLAST of Spg017094 vs. NCBI nr
Match: XP_022983897.1 (uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983898.1 uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983899.1 uncharacterized protein LOC111482383 [Cucurbita maxima])

HSP 1 Score: 497.7 bits (1280), Expect = 1.0e-136
Identity = 255/302 (84.44%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALND-SSSVV 179
           MA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  LND SSSVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 180 SRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDV-SYKGSVVNKICH 239
           S NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM+TNMDV S +G VV+KICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 240 ELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCG 299
           +LRT GYIKR RELKVDAWI LDNFVPKRAG  GSR RAL+SNSKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 300 TLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPA 359
           T DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ADLHGAMILV ECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 360 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPS 419
           FTGISGIMIRETAETFGIVTKDDKFRVVPKKS  FIFQWDCWK+TLLGDKL SR+P LPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWKITLLGDKLSSRIPSLPS 300

[Close]

BLAST of Spg017094 vs. ExPASy Swiss-Prot
Match: Q9ZW76 (Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE=2 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 6.3e-60
Identity = 134/291 (46.05%), Postives = 184/291 (63.23%), Query Frame = 0


Query: 128 DLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSI 187
           D  + A+ A+ERR A AKA+LLQQQ+        +K  K K   +D    +  +    S+
Sbjct: 9   DQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMKESHQADSL 68

Query: 188 LLQSGEKPPNKDVEESDPI-YFSLSAAVNENLMATNMDV-SYKGSVVNKICHELRTGG-- 247
              S       D ++ D + Y  LS  V+ENL+ATN+   S KG++V+K+ H L   G  
Sbjct: 69  PTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHNLLRSGDS 128

Query: 248 ---YIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLD 307
              Y++  + +K+D +I LDNFV  R+  +GS+ +A + +SKRSK  MSMK+ KK G L 
Sbjct: 129 AQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGALH 188

Query: 308 LPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTG 367
           +P D  KF++F PMH MW+SY+ + +   G+  L+   L ADLHGA + VAECKI +FTG
Sbjct: 189 IPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECKIASFTG 248

Query: 368 ISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSR 412
           + GIM+RET+ETFGI+T+DDKFRVVPKK  VFI Q DCWK+TL GDK  SR
Sbjct: 249 VQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 290

[Close]

BLAST of Spg017094 vs. ExPASy Swiss-Prot
Match: O95707 (Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 9.2e-19
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 275 RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDA- 334
           R  R   K+  + +S +Q ++    D+  +  ++ +F P+H++WK Y++     +  D  
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCSGLKPDTQ 122

Query: 335 ---LARNFLIADLHGAMILVAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSC 394
              +    L ADLHGA+I V + K P++ GI+GI+++ET   F I+TK+D+ +V+PK +C
Sbjct: 123 PQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNC 182

Query: 395 VFIFQWDCWKVTLLGDKLGSR 412
           VF  + D +   + G K   R
Sbjct: 183 VFTVETDGFISYIYGSKFQLR 203

[Close]

BLAST of Spg017094 vs. ExPASy Swiss-Prot
Match: Q5R7B0 (Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-18
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 275 RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDA- 334
           R  R   K+  + +S +Q ++    D+  +  ++ +F P+H++WK Y++     +  D  
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQ 122

Query: 335 ---LARNFLIADLHGAMILVAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSC 394
              +    L ADLHGA+I V + K P++ GI+GI+++ET   F I+TK+D+ +V+PK +C
Sbjct: 123 PQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIITKEDRLKVIPKLNC 182

Query: 395 VFIFQWDCWKVTLLGDKLGSR 412
           VF  + D +   + G K   R
Sbjct: 183 VFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of Spg017094 vs. ExPASy Swiss-Prot
Match: Q5M882 (Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-18
Identity = 43/134 (32.09%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 282 KRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDA----LARN 341
           K+  + +S KQ ++    D+  +  ++ +F P+H++WK Y++     +  D     +   
Sbjct: 71  KKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAK 130

Query: 342 FLIADLHGAMILVAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWD 401
            L ADLHGA+I V + K P++ G++GI+++ET   F I+TK+D  +V+PK++CVF  + D
Sbjct: 131 LLKADLHGAVISVTKSKCPSYVGVTGILLQETKHVFKIITKEDHLKVIPKQNCVFTIEID 190

Query: 402 CWKVTLLGDKLGSR 412
            +   + G K   R
Sbjct: 191 DFISYIYGSKFQLR 204

[Close]

BLAST of Spg017094 vs. ExPASy Swiss-Prot
Match: Q2KIB9 (Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.5e-18
Identity = 41/138 (29.71%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 278 RSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDA---- 337
           +   ++  + +S KQ ++    D+  +  ++ +F P+H++WK Y++     +  D     
Sbjct: 66  QKEKRKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQM 125

Query: 338 LARNFLIADLHGAMILVAECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFI 397
           +    L ADLHGA++ V + K P++ G++GI+++ET   F I+TK+D+ +V+PK +CVF 
Sbjct: 126 IQAKLLKADLHGAIVSVTKSKCPSYVGVTGILLQETKHVFKIITKEDRLKVIPKLNCVFT 185

Query: 398 FQWDCWKVTLLGDKLGSR 412
            + D +   + G K   R
Sbjct: 186 VEIDGFISYIYGSKFQLR 203

[Close]

BLAST of Spg017094 vs. ExPASy TrEMBL
Match: A0A6J1J0L0 (uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 5.0e-137
Identity = 255/302 (84.44%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALND-SSSVV 179
           MA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  LND SSSVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 180 SRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDV-SYKGSVVNKICH 239
           S NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM+TNMDV S +G VV+KICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 240 ELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCG 299
           +LRT GYIKR RELKVDAWI LDNFVPKRAG  GSR RAL+SNSKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 300 TLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPA 359
           T DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ADLHGAMILV ECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 360 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPS 419
           FTGISGIMIRETAETFGIVTKDDKFRVVPKKS  FIFQWDCWK+TLLGDKL SR+P LPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWKITLLGDKLSSRIPSLPS 300

[Close]

BLAST of Spg017094 vs. ExPASy TrEMBL
Match: A0A6J1F2W6 (ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.8e-135
Identity = 253/302 (83.77%), Postives = 264/302 (87.42%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSS-VV 179
           MA   ASQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE KGK  LNDSSS VV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 180 SRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDV-SYKGSVVNKICH 239
           S NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENLM TNMDV S +G VV+KICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120

Query: 240 ELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCG 299
           ELRT GYIKR RELKVDAWI LDNFVPKRA M GSR RAL+S+SKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180

Query: 300 TLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPA 359
           T DLPSDFHKFEIFWPMHDMWKSY+KQRL HVG D LARN L+ DLHGAMILV ECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240

Query: 360 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPS 419
           FTGISGIMIRETAETFGI TKD+KFRVVPKKS VFIFQWDCWK+TLLGDKL SR+P LPS
Sbjct: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

[Close]

BLAST of Spg017094 vs. ExPASy TrEMBL
Match: A0A1S3B674 (Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 4.0e-134
Identity = 251/309 (81.23%), Postives = 273/309 (88.35%), Query Frame = 0


Query: 112 GLISHRTPMADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTAL 171
           GLI+ +  M+D KASQDLRKHALEALERRCAAAK ELLQQQ KISSTE+ KKEVKGK++L
Sbjct: 6   GLINQQISMSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSL 65

Query: 172 NDSSSVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVS-YKGS 231
           ND +SVVSRNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE LMA++MDVS  +G 
Sbjct: 66  NDPTSVVSRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGR 125

Query: 232 VVNKICHELRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSM 291
           VV+KICHEL+  GY+KR +ELKVDA I LDNFVPKRAGM GSRMR LRS SKRSKRHMSM
Sbjct: 126 VVDKICHELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSM 185

Query: 292 KQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILV 351
           KQHKKCGT DLPSD HK+EIFWPMHDMWKSY+KQRL +VG DALARN LIADLHGAMI V
Sbjct: 186 KQHKKCGTFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRV 245

Query: 352 AECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGS 411
            ECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKS VFIFQWDCWKVTLLGDKL S
Sbjct: 246 VECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSS 305

Query: 412 RLPGLPSAN 420
           R+P LPS+N
Sbjct: 306 RIPSLPSSN 313

[Close]

BLAST of Spg017094 vs. ExPASy TrEMBL
Match: A0A5D3DP72 (Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002330 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 9.8e-133
Identity = 249/301 (82.72%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVS 179
           M+D KASQDLRKHALEALERRCAAAK ELLQQQ KISSTE+ KKEVKGK+ALND +SVVS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSALNDPTSVVS 60

Query: 180 RNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVS-YKGSVVNKICHE 239
           RNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE LMA++MDVS  +G VV+KICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 240 LRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGT 299
           L+  GY+KR +ELKVDA I LDNFVPKRAGM GSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 300 LDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAF 359
            DLPSD HK+EIFWPMHDMWKSY+KQRL +VG DALARN LIADLHGAMI V ECKIPAF
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPAF 240

Query: 360 TGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPSA 419
           TG SG+MIRETAETFGIVTKDDKFRVVPKKS VFIFQWDCWKVTLLGDKL SR+P LPS+
Sbjct: 241 TGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPSS 300

[Close]

BLAST of Spg017094 vs. ExPASy TrEMBL
Match: A0A1S3B6Y6 (uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 2.2e-132
Identity = 248/301 (82.39%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 120 MADGKASQDLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVS 179
           M+D KASQDLRKHALEALERRCAAAK ELLQQQ KISSTE+ KKEVKGK++LND +SVVS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 60

Query: 180 RNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDVS-YKGSVVNKICHE 239
           RNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE LMA++MDVS  +G VV+KICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 240 LRTGGYIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGT 299
           L+  GY+KR +ELKVDA I LDNFVPKRAGM GSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 300 LDLPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAF 359
            DLPSD HK+EIFWPMHDMWKSY+KQRL +VG DALARN LIADLHGAMI V ECKIPAF
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPAF 240

Query: 360 TGISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSRLPGLPSA 419
           TG SG+MIRETAETFGIVTKDDKFRVVPKKS VFIFQWDCWKVTLLGDKL SR+P LPS+
Sbjct: 241 TGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPSS 300

[Close]

BLAST of Spg017094 vs. TAIR 10
Match: AT2G43190.3 (ribonuclease P family protein )

HSP 1 Score: 234.2 bits (596), Expect = 2.0e-61
Identity = 134/291 (46.05%), Postives = 190/291 (65.29%), Query Frame = 0


Query: 128 DLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSI 187
           D  + A+ A+ERR A AKA+LLQQQ+     ++ +K+ KG + ++    V  +  + +  
Sbjct: 9   DQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVD----VSMKESHQADS 68

Query: 188 LLQSGEKPPNKDVEESDPI-YFSLSAAVNENLMATNMDV-SYKGSVVNKICHELRTGG-- 247
           L    +    KD ++ D + Y  LS  V+ENL+ATN+   S KG++V+K+ H L   G  
Sbjct: 69  LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHNLLRSGDS 128

Query: 248 ---YIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLD 307
              Y++  + +K+D +I LDNFV  R+  +GS+ +A + +SKRSK  MSMK+ KK G L 
Sbjct: 129 AQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGALH 188

Query: 308 LPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTG 367
           +P D  KF++F PMH MW+SY+ + +   G+  L+   L ADLHGA + VAECKI +FTG
Sbjct: 189 IPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECKIASFTG 248

Query: 368 ISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSR 412
           + GIM+RET+ETFGI+T+DDKFRVVPKK  VFI Q DCWK+TL GDK  SR
Sbjct: 249 VQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 289

[Close]

BLAST of Spg017094 vs. TAIR 10
Match: AT2G43190.2 (ribonuclease P family protein )

HSP 1 Score: 234.2 bits (596), Expect = 2.0e-61
Identity = 134/291 (46.05%), Postives = 190/291 (65.29%), Query Frame = 0


Query: 128 DLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSI 187
           D  + A+ A+ERR A AKA+LLQQQ+     ++ +K+ KG + ++    V  +  + +  
Sbjct: 9   DQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVD----VSMKESHQADS 68

Query: 188 LLQSGEKPPNKDVEESDPI-YFSLSAAVNENLMATNMDV-SYKGSVVNKICHELRTGG-- 247
           L    +    KD ++ D + Y  LS  V+ENL+ATN+   S KG++V+K+ H L   G  
Sbjct: 69  LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHNLLRSGDS 128

Query: 248 ---YIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLD 307
              Y++  + +K+D +I LDNFV  R+  +GS+ +A + +SKRSK  MSMK+ KK G L 
Sbjct: 129 AQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGALH 188

Query: 308 LPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTG 367
           +P D  KF++F PMH MW+SY+ + +   G+  L+   L ADLHGA + VAECKI +FTG
Sbjct: 189 IPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECKIASFTG 248

Query: 368 ISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSR 412
           + GIM+RET+ETFGI+T+DDKFRVVPKK  VFI Q DCWK+TL GDK  SR
Sbjct: 249 VQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 289

[Close]

BLAST of Spg017094 vs. TAIR 10
Match: AT2G43190.1 (ribonuclease P family protein )

HSP 1 Score: 233.0 bits (593), Expect = 4.5e-61
Identity = 134/291 (46.05%), Postives = 184/291 (63.23%), Query Frame = 0


Query: 128 DLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSI 187
           D  + A+ A+ERR A AKA+LLQQQ+        +K  K K   +D    +  +    S+
Sbjct: 9   DQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMKESHQADSL 68

Query: 188 LLQSGEKPPNKDVEESDPI-YFSLSAAVNENLMATNMDV-SYKGSVVNKICHELRTGG-- 247
              S       D ++ D + Y  LS  V+ENL+ATN+   S KG++V+K+ H L   G  
Sbjct: 69  PTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHNLLRSGDS 128

Query: 248 ---YIKRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLD 307
              Y++  + +K+D +I LDNFV  R+  +GS+ +A + +SKRSK  MSMK+ KK G L 
Sbjct: 129 AQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGALH 188

Query: 308 LPSDFHKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTG 367
           +P D  KF++F PMH MW+SY+ + +   G+  L+   L ADLHGA + VAECKI +FTG
Sbjct: 189 IPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECKIASFTG 248

Query: 368 ISGIMIRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSR 412
           + GIM+RET+ETFGI+T+DDKFRVVPKK  VFI Q DCWK+TL GDK  SR
Sbjct: 249 VQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 290

[Close]

BLAST of Spg017094 vs. TAIR 10
Match: AT2G43190.4 (ribonuclease P family protein )

HSP 1 Score: 196.1 bits (497), Expect = 6.0e-50
Identity = 122/286 (42.66%), Postives = 165/286 (57.69%), Query Frame = 0


Query: 128 DLRKHALEALERRCAAAKAELLQQQKKISSTEELKKEVKGKTALNDSSSVVSRNQYDSSI 187
           D  + A+ A+ERR A AKA+LLQQQ+        +K  K K   +D    +  +    S+
Sbjct: 9   DQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMKESHQADSL 68

Query: 188 LLQSGEKPPNKDVEESDPI-YFSLSAAVNENLMATNMDV-SYKGSVVNKICHELRTGGYI 247
              S       D ++ D + Y  LS  V+ENL+ATN+   S KG++V+K           
Sbjct: 69  PTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK----------- 128

Query: 248 KRPRELKVDAWIRLDNFVPKRAGMTGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDF 307
                               R+  +GS+ +A + +SKRSK  MSMK+ KK G L +P D 
Sbjct: 129 -------------------SRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGALHIPKDL 188

Query: 308 HKFEIFWPMHDMWKSYLKQRLGHVGQDALARNFLIADLHGAMILVAECKIPAFTGISGIM 367
            KF++F PMH MW+SY+ + +   G+  L+   L ADLHGA + VAECKI +FTG+ GIM
Sbjct: 189 QKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECKIASFTGVQGIM 248

Query: 368 IRETAETFGIVTKDDKFRVVPKKSCVFIFQWDCWKVTLLGDKLGSR 412
           +RET+ETFGI+T+DDKFRVVPKK  VFI Q DCWK+TL GDK  SR
Sbjct: 249 VRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 255

The following BLAST results are available for this feature:

BLAST of Spg017094 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906079.1	2.9e-139	85.71	ribonuclease P protein subunit p29 isoform X3 [Benincasa hispida]	[more]
KAG6580591.1	2.9e-139	83.87	Beta-1,4-xylosyltransferase IRX9, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7017346.1	2.9e-139	83.87	Ribonuclease P protein subunit p29, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023526523.1	9.4e-138	85.10	ribonuclease P protein subunit p29 [Cucurbita pepo subsp. pepo]	[more]
XP_022983897.1	1.0e-136	84.44	uncharacterized protein LOC111482383 [Cucurbita maxima] >XP_022983898.1 uncharac...	[more]

BLAST of Spg017094 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW76	6.3e-60	46.05	Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE...	[more]
O95707	9.2e-19	31.91	Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2	[more]
Q5R7B0	1.2e-18	31.91	Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1	[more]
Q5M882	1.2e-18	32.09	Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV...	[more]
Q2KIB9	4.5e-18	29.71	Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1	[more]

BLAST of Spg017094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0L0	5.0e-137	84.44	uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383...	[more]
A0A6J1F2W6	2.8e-135	83.77	ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684...	[more]
A0A1S3B674	4.0e-134	81.23	Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 ...	[more]
A0A5D3DP72	9.8e-133	82.72	Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B6Y6	2.2e-132	82.39	uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Spg017094 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43190.3	2.0e-61	46.05	ribonuclease P family protein	[more]
AT2G43190.2	2.0e-61	46.05	ribonuclease P family protein	[more]
AT2G43190.1	4.5e-61	46.05	ribonuclease P family protein	[more]
AT2G43190.4	6.0e-50	42.66	ribonuclease P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..161
None	No IPR available	COILS	Coil	Coil	coord: 57..77
None	No IPR available	COILS	Coil	Coil	coord: 82..102
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	SMART	SM00538	pop4_2	coord: 332..427 e-value: 1.5E-13 score: 61.0
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	PFAM	PF01868	UPF0086	coord: 338..411 e-value: 4.4E-18 score: 65.0
IPR036980	Ribonuclease P/MRP subunit Rpp29 superfamily	GENE3D	2.30.30.210	Ribonuclease P/MRP, subunit p29	coord: 331..415 e-value: 2.2E-20 score: 74.1
IPR016848	Ribonuclease P/MRP subunit Rpp29	PANTHER	PTHR13348	RIBONUCLEASE P SUBUNIT P29	coord: 136..412
IPR023534	Rof/RNase P-like	SUPERFAMILY	101744	Rof/RNase P subunit-like	coord: 341..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017094.1	Spg017094.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006364	rRNA processing
biological_process	GO:0001682	tRNA 5'-leader removal
biological_process	GO:0006396	RNA processing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000172	ribonuclease MRP complex
cellular_component	GO:0030677	ribonuclease P complex
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0033204	ribonuclease P RNA binding
molecular_function	GO:0003723	RNA binding