Spg016406 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGGATTGAGCGCCGCAGCATCAGCGAAACGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAGCAGTTGAGGGCAGAGTTTTAAAATCAGTTGCAGAGAAGTTAGCAGTTGGGGAGGAGAAAATTGAAGCTTTGAAGCCAATTGGAGTGGCAGCTTATATGGAAAAAGTTAATTCGTTAAGTAGCAGTAGTCGCAGTGCATTTAGAAGCTTGAGTTTCGTGTTGGCTTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA ATGGCAATGGGATTGAGCGCCGCAGCATCAGCGAAACGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAGCAGTTGAGGGCAGAGTTTTAAAATCAGTTGCAGAGAAGTTAGCAGTTGGGGAGGAGAAAATTGAAGCTTTGAAGCCAATTGGAGTGGCAGCTTATATGGAAAAAGTTAATTCGTTAAGTAGCAGTAGTCGCAGTGCATTTAGAAGCTTGAGTTTCGTGTTGGCTTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA ATGGCAATGGGATTGAGCGCCGCAGCATCAGCGAAACGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAGCAGTTGAGGGCAGAGTTTTAAAATCAGTTGCAGAGAAGTTAGCAGTTGGGGAGGAGAAAATTGAAGCTTTGAAGCCAATTGGAGTGGCAGCTTATATGGAAAAAGTTAATTCGTTAAGTAGCAGTAGTCGCAGTGCATTTAGAAGCTTGAGTTTCGTGTTGGCTTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA MAMGLSAAASAKRLCFVVGVLLMVASTHFLAVEGRVLKSVAEKLAVGEEKIEALKPIGVAAYMEKVNSLSSSSRSAFRSLSFVLASGPSKKGPGH Homology
BLAST of Spg016406 vs. NCBI nr
Match: KAG6591405.1 (hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.2 bits (326), Expect = 9.6e-27 Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Spg016406 vs. NCBI nr
Match: KGN55240.1 (hypothetical protein Csa_012906 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 3.9e-20 Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Spg016406 vs. NCBI nr
Match: KAG6608443.1 (hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103.6 bits (257), Expect = 9.6e-19 Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of Spg016406 vs. NCBI nr
Match: KAA0064422.1 (hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa] >TYK20165.1 hypothetical protein E5676_scaffold134G002970 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 5.8e-16 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Spg016406 vs. NCBI nr
Match: XP_034677217.1 (uncharacterized protein LOC117907698 [Vitis riparia]) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-06 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Spg016406 vs. ExPASy TrEMBL
Match: A0A0A0KZV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641720 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.9e-20 Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Spg016406 vs. ExPASy TrEMBL
Match: A0A5D3D9C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002970 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Spg016406 vs. ExPASy TrEMBL
Match: A0A5B7BBR4 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_035355 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.2e-08 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of Spg016406 vs. ExPASy TrEMBL
Match: A0A061FFY1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034774 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06 Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of Spg016406 vs. ExPASy TrEMBL
Match: A0A6N2MLH5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS377490 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05 Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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