Spg012840 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012840
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Plant protein 1589 of unknown function
Location	scaffold1: 13762106 .. 13763164 (-)
RNA-Seq Expression	Spg012840
Synteny	Spg012840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCATTAAATCCACCACTTGATATTATTATATATATATAAATACAATCCCTCCACTTTCCCACCTCCCAACACTTTCCCTTCACTTTCTCTCATTTTCTCTCCATCCAAACAGCCCCCATGGACGACGACCCCTCTGCTTCATACATCCACATGGTATTTTTCTTTTTCTTTTTTCTTTTTTCTCTCAACATTTTATTTGTGATGTGAGGGTGTATGATTGTTACGGTGTAGGTGCACCACCTGATCGAGAAGTGCATAATTTTCAACATGTCCAAAGAGGAATGCATGGAAGCTCTCTCCAAACATGCAAATATCAAACCGGTCATCACTTCCACCGGTTCGTTTCTCACGTGACATGCACGGACTGGGATTGGTTCCTTTTTTATTCTTTTTTTTTTTTGAGAATTTTTGTAAAATGTGTGCAGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTTCTGCAAGGGCTTCGGAGGGGAATTCTGCCGACACGTCGGATTTCAACTTGCTGGGTTCGGAGGATACGACGTCGTCTTTGGGTGGTAGGTGACTAGACAGGCGGCGGCGTAGAGTCTAGAGTGAGTGGAAATTAATAAAAAAAAAAAAAGAAAAGACTGACGGCGGCGATACGATGTACGACGTCGTTTAGGTGGGATGGAACAGCGCAAGTGGCGGCGTAGAGAGAGGACGACGAAAGGCTAATTGAGGGGTGCGAAGATATTTTGGGATACTATTGATTTGGCTGGCTGACACGTGGATACACGTGGCATCATGCTACAACTTTCTTTTTTAATGTATTGCTGTCGCTTGCTGATTGGGCCTTGTCGGGAGGTGGTAGTTTATAATTTATGTGGGGATTTCTTTTTTGTATTTTTTGTTGTTTTTATTTGATATTGTAAGGTTTATAGATTTAGTTTTCTTTTTGTGATGGTGTTGAATTAATTTAAAGGAATGTGACCATAGACATAAAATCAACTCTCGACCAATAAGTCAGAAGTTTGAATCTGTTCAAATCTGCTG

mRNA sequence

ATGGACGACGACCCCTCTGCTTCATACATCCACATGGTGCACCACCTGATCGAGAAGTGCATAATTTTCAACATGTCCAAAGAGGAATGCATGGAAGCTCTCTCCAAACATGCAAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTTCTGCAAGGGCTTCGGAGGGGAATTCTGCCGACACGTCGGATTTCAACTTGCTGGGTTCGGAGGATACGACGTCGTCTTTGGGTGGTAGGTGA

Coding sequence (CDS)

ATGGACGACGACCCCTCTGCTTCATACATCCACATGGTGCACCACCTGATCGAGAAGTGCATAATTTTCAACATGTCCAAAGAGGAATGCATGGAAGCTCTCTCCAAACATGCAAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTTCTGCAAGGGCTTCGGAGGGGAATTCTGCCGACACGTCGGATTTCAACTTGCTGGGTTCGGAGGATACGACGTCGTCTTTGGGTGGTAGGTGA

Protein sequence

MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTSSLGGR

Homology

[Close]

BLAST of Spg012840 vs. NCBI nr
Match: XP_038883060.1 (uncharacterized protein LOC120074114 [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 4.5e-43
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          MDDDPSASYIHMVHHLIEKCIIFNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTSSL 98
          EAYKKKRRDV+ + SEGNS+DTSDFNLLGS DTTSSL
Sbjct: 61 EAYKKKRRDVTVKVSEGNSSDTSDFNLLGSRDTTSSL 97

[Close]

BLAST of Spg012840 vs. NCBI nr
Match: XP_023544368.1 (uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 hypothetical protein SDJN02_03581 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 84/95 (88.42%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CIIFNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTS 96
          EAYKKKRRDV+ RA++GNS+DTSDFNLL S +TTS
Sbjct: 61 EAYKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTS 95

[Close]

BLAST of Spg012840 vs. NCBI nr
Match: KAG6603679.1 (hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CIIFNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTS 96
          EAYKKKRRDV+ RA++GNS DTSDFNLL S +TTS
Sbjct: 61 EAYKKKRRDVTTRAADGNSTDTSDFNLLDSGNTTS 95

[Close]

BLAST of Spg012840 vs. NCBI nr
Match: XP_022977252.1 (uncharacterized protein LOC111477620 [Cucurbita maxima])

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CI+FNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTS 96
          EAYKKKRRDV+ RA++G S+DTSDFNLL S DTTS
Sbjct: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTS 95

[Close]

BLAST of Spg012840 vs. NCBI nr
Match: XP_004142092.1 (uncharacterized protein LOC101219487 [Cucumis sativus] >KGN54219.1 hypothetical protein Csa_018164 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 5.1e-39
Identity = 84/99 (84.85%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
           MDDDPSASYIHMVHHLIEKCIIFNM+KEEC+EALSKHANI+PVITSTVWNELEKENKEFF
Sbjct: 1   MDDDPSASYIHMVHHLIEKCIIFNMTKEECLEALSKHANIEPVITSTVWNELEKENKEFF 60

Query: 61  EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTSSLGG 100
           EAYKKKRRDV+ +  +G+S++T+DFNLLGS DTTSSL G
Sbjct: 61  EAYKKKRRDVTTK--KGSSSETTDFNLLGSRDTTSSLSG 97

[Close]

BLAST of Spg012840 vs. ExPASy TrEMBL
Match: A0A6J1IHY2 (uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.6e-40
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE+CI+FNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTS 96
          EAYKKKRRDV+ RA++G S+DTSDFNLL S DTTS
Sbjct: 61 EAYKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTS 95

[Close]

BLAST of Spg012840 vs. ExPASy TrEMBL
Match: A0A0A0KZG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39
Identity = 84/99 (84.85%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
           MDDDPSASYIHMVHHLIEKCIIFNM+KEEC+EALSKHANI+PVITSTVWNELEKENKEFF
Sbjct: 1   MDDDPSASYIHMVHHLIEKCIIFNMTKEECLEALSKHANIEPVITSTVWNELEKENKEFF 60

Query: 61  EAYKKKRRDVSARASEGNSADTSDFNLLGSEDTTSSLGG 100
           EAYKKKRRDV+ +  +G+S++T+DFNLLGS DTTSSL G
Sbjct: 61  EAYKKKRRDVTTK--KGSSSETTDFNLLGSRDTTSSLSG 97

[Close]

BLAST of Spg012840 vs. ExPASy TrEMBL
Match: A0A6J1IAZ7 (uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE CI+FNMSKEECMEALSKHANI+PVITSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEICILFNMSKEECMEALSKHANIEPVITSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGN-SADTSDFNLLGSEDTTS 96
          +AY+KKRRDV+ R  EGN S+DT  FNLLG  DTTS
Sbjct: 61 QAYEKKRRDVTTRKLEGNSSSDTLGFNLLGLGDTTS 96

[Close]

BLAST of Spg012840 vs. ExPASy TrEMBL
Match: A0A6J1HDK1 (uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC111463185 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.3e-35
Identity = 79/95 (83.16%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M+DDPSASYIHMVHHLIE  I+FNMSKEECMEALSKHANI+PV+TSTVWNELEKENKEFF
Sbjct: 1  MEDDPSASYIHMVHHLIEISILFNMSKEECMEALSKHANIEPVVTSTVWNELEKENKEFF 60

Query: 61 EAYKKKRRDVSARASEGN-SADTSDFNLLGSEDTT 95
          EAY+KKRRDV+ R  EGN S+DTS FNLLG  DTT
Sbjct: 61 EAYEKKRRDVTTRKLEGNSSSDTSAFNLLGLGDTT 95

[Close]

BLAST of Spg012840 vs. ExPASy TrEMBL
Match: A0A6J1GEA1 (uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC111453395 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-33
Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 12 MVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVS 71
          MVHHLIE+CIIFNM+KEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDV+
Sbjct: 1  MVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVT 60

Query: 72 ARASEGNSADTSDFNLLGSEDTTS 96
           RA++GNS+DTSDFNLL S +TTS
Sbjct: 61 TRAADGNSSDTSDFNLLDSGNTTS 84

[Close]

BLAST of Spg012840 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MDDDPSASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFF 60
          M D  SASYIHMV H+IEKC+IF+MSKEEC+EALSKHANI PVITSTVW ELEKENKEFF
Sbjct: 1  MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 61 EAYKKKR 68
          +AY++++
Sbjct: 61 KAYEERQ 67

[Close]

BLAST of Spg012840 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 7  ASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKK 66
          ASYIH+VHHLIE+CI+FNM KEECM+AL KHANIKP+ITSTVW EL KENKEFFEAY+++
Sbjct: 9  ASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYERR 68

Query: 67 RRDV 71
          R ++
Sbjct: 69 REEI 72

[Close]

BLAST of Spg012840 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 7  ASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKK 66
          A YIH+V H+IE C+ FNMSKEECMEALS++ANI P+ITSTVW EL KENK+FFE Y++K
Sbjct: 7  AVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETYEQK 66

[Close]

BLAST of Spg012840 vs. TAIR 10
Match: AT5G02580.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-15
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 7  ASYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITST 48
          ASYIH+VHHLIE+CI+FNM KEECM+AL KHANIKP+ITST
Sbjct: 9  ASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITST 49

[Close]

BLAST of Spg012840 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 77.0 bits (188), Expect = 9.4e-15
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 8  SYIHMVHHLIEKCIIFNMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAY 64
          SYI MV H+IE+CI+  M+++EC++AL  HA+I P++T TVW  L++ENK+FFE Y
Sbjct: 22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of Spg012840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883060.1	4.5e-43	92.78	uncharacterized protein LOC120074114 [Benincasa hispida]	[more]
XP_023544368.1	1.0e-39	88.42	uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 ...	[more]
KAG6603679.1	1.4e-39	88.42	hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977252.1	1.8e-39	87.37	uncharacterized protein LOC111477620 [Cucurbita maxima]	[more]
XP_004142092.1	5.1e-39	84.85	uncharacterized protein LOC101219487 [Cucumis sativus] >KGN54219.1 hypothetical ...	[more]

BLAST of Spg012840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg012840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHY2	8.6e-40	87.37	uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620...	[more]
A0A0A0KZG8	2.5e-39	84.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1	[more]
A0A6J1IAZ7	1.3e-35	83.33	uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258...	[more]
A0A6J1HDK1	6.3e-35	83.16	uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC1114631...	[more]
A0A6J1GEA1	2.7e-33	88.10	uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]

BLAST of Spg012840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55240.1	1.5e-25	77.61	Plant protein 1589 of unknown function	[more]
AT5G02580.1	1.5e-25	76.56	Plant protein 1589 of unknown function	[more]
AT3G28990.1	1.5e-20	71.67	Plant protein 1589 of unknown function	[more]
AT5G02580.2	2.5e-15	82.93	Plant protein 1589 of unknown function	[more]
AT1G10657.2	9.4e-15	55.36	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 13..64 e-value: 8.6E-28 score: 96.4
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 10..65 e-value: 1.3E-26 score: 90.3
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 4..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..100
None	No IPR available	PANTHER	PTHR31871:SF32	SUBFAMILY NOT NAMED	coord: 4..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012840.1	Spg012840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity