Spg009299 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009299
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein Ycf2
Location	scaffold32: 135859 .. 137076 (+)
RNA-Seq Expression	Spg009299
Synteny	Spg009299

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGAATATCTTCTCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAAATGCCTATACGAACCCAATTCATTACTTCGGGATAGAAATGGAGAATCAAAGGAAAGCGGTCTTTGTTTGAGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTCGGCCGTAGAAGGCGCTCTGGTGAGATCCTCACAGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCAAGGAATCCCTAAGATATGATGCAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGCAGAAGGGGAAGGGGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGGCTTTTTTCGAATAAGCCAATTCATTTGGGATCCTGCCGATCCACTCTTTTTCCTATTCAAAGATCAGCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAACAGATCTTCCTACATCTATATATAAACGCAGGTTTATCAAGAATACGCAAGAAAAGCACTTCGGGTTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTCCATCCGAGAGTTAT

mRNA sequence

ATGAAAGGAATATCTTCTCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGCGCTCTGAGATTTCTCTATGAACAATACGAATCGGAGTTTGCAGAAGGGGAAGGGGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGGCTTTTTTCGAATAAGCCAATTCATTTGGGATCCTGCCGATCCACTCTTTTTCCTATTCAAAGATCAGCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAACAGATCTTCCTACATCTATATATAAACGCAGGTTTATCAAGAATACGCAAGAAAAGCACTTCGGGTTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTCCATCCGAGAGTTAT

Coding sequence (CDS)

ATGAAAGGAATATCTTCTCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGCGCTCTGAGATTTCTCTATGAACAATACGAATCGGAGTTTGCAGAAGGGGAAGGGGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGGCTTTTTTCGAATAAGCCAATTCATTTGGGATCCTGCCGATCCACTCTTTTTCCTATTCAAAGATCAGCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAACAGATCTTCCTACATCTATATATAAACGCAGGTTTATCAAGAATACGCAAGAAAAGCACTTCGGGTTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATAGTTCATTATCTAATGGATTTTTCCGTTCTAATACTCCATCCGAGAGTTAT

Protein sequence

MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGALRFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQRWLRTNSSLSNGFFRSNTPSESY

Homology

[Close]

BLAST of Spg009299 vs. NCBI nr
Match: YP_010131137.1 (hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75785.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75802.1 hypothetical protein RF2 [Benincasa hispida] >QSQ72354.1 Ycf2 protein [Benincasa hispida] >QSQ72372.1 Ycf2 protein [Benincasa hispida])

HSP 1 Score: 419.1 bits (1076), Expect = 3.1e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2046 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2105

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2106 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2165

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2166 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2225

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2226 WLRTNSSLSNGFFRSNTPSESY 2247

[Close]

BLAST of Spg009299 vs. NCBI nr
Match: YP_009752286.1 (Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanthes baviensis] >QIT04260.1 Ycf2 protein [Trichosanthes baviensis] >QIT04277.1 Ycf2 protein [Trichosanthes baviensis])

HSP 1 Score: 419.1 bits (1076), Expect = 3.1e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2044 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2103

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2104 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2163

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2164 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2223

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2224 WLRTNSSLSNGFFRSNTPSESY 2245

[Close]

BLAST of Spg009299 vs. NCBI nr
Match: YP_009420838.1 (Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_009431686.1 Ycf2 [Citrullus rehmii] >YP_009431705.1 Ycf2 [Citrullus rehmii] >ASP44531.1 Ycf2 [Citrullus colocynthis] >ASP44534.1 Ycf2 [Citrullus colocynthis] >ASY96311.1 Ycf2 [Citrullus rehmii] >ASY96314.1 Ycf2 [Citrullus rehmii])

HSP 1 Score: 419.1 bits (1076), Expect = 3.1e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2042 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2101

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2102 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2161

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2162 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2221

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2222 WLRTNSSLSNGFFRSNTPSESY 2243

[Close]

BLAST of Spg009299 vs. NCBI nr
Match: QZL38725.1 (Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhosus])

HSP 1 Score: 419.1 bits (1076), Expect = 3.1e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2042 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2101

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2102 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2161

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2162 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2221

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2222 WLRTNSSLSNGFFRSNTPSESY 2243

[Close]

BLAST of Spg009299 vs. NCBI nr
Match: QJS52308.1 (hypothetical protein RF2 [Indofevillea khasiana] >QJS52309.1 hypothetical protein RF2 [Indofevillea khasiana])

HSP 1 Score: 419.1 bits (1076), Expect = 3.1e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2042 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2101

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2102 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2161

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2162 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2221

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2222 WLRTNSSLSNGFFRSNTPSESY 2243

[Close]

BLAST of Spg009299 vs. ExPASy Swiss-Prot
Match: B1A978 (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 9.4e-113
Identity = 195/202 (96.53%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYE+YESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2060 RFLYEKYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2119

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDE+DELQ NDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2120 WARSFRGKRIIYDEKDELQANDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2179

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLIHRQR
Sbjct: 2180 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKHFELLIHRQR 2239

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2240 WLRTNSSLSNGFFRSNTPSESY 2261

[Close]

BLAST of Spg009299 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.6e-112
Identity = 193/202 (95.54%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYE+YESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPN LGFPY
Sbjct: 2042 RFLYEKYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPY 2101

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDE++ELQENDSEFLQSGT+QYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2102 WARSFRGKRIIYDEKEELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQFIWDPADPLF 2161

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLIHRQR
Sbjct: 2162 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDSPTSIYKRWFIKNTQEKHFELLIHRQR 2221

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2222 WLRTNSSLSNGFFRSNTPSESY 2243

[Close]

BLAST of Spg009299 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 5.2e-111
Identity = 192/202 (95.05%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQY+SEF EGEGEGVLDPQ+IEEDLFNHIVWAPRIWRPWGFLFDCIE PNELGFPY
Sbjct: 2047 RFLYEQYKSEFEEGEGEGVLDPQRIEEDLFNHIVWAPRIWRPWGFLFDCIESPNELGFPY 2106

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEED LQENDSEFLQSGT+QYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2107 WARSFRGKRIIYDEEDGLQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQFIWDPADPLF 2166

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEK+F LLI+RQR
Sbjct: 2167 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKYFELLIYRQR 2226

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2227 WLRTNSSLSNGFFRSNTPSESY 2248

[Close]

BLAST of Spg009299 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.5e-110
Identity = 192/202 (95.05%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYE+YESEF EG GEG LDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIER NELGFPY
Sbjct: 2062 RFLYEKYESEFEEGAGEGALDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERTNELGFPY 2121

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGT+QYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2122 WARSFRGKRIIYDEEDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQFIWDPADPLF 2181

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLIHRQR
Sbjct: 2182 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKHFELLIHRQR 2241

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNG FRSNTPSESY
Sbjct: 2242 WLRTNSSLSNGSFRSNTPSESY 2263

[Close]

BLAST of Spg009299 vs. ExPASy Swiss-Prot
Match: A0ZZ78 (Protein Ycf2 OS=Gossypium barbadense OX=3634 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.8e-108
Identity = 191/204 (93.63%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            R LYE+YESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2058 RNLYEKYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2117

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WA SFRGKRIIYDE+DELQENDS FLQSGT+QYQ RDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2118 WAGSFRGKRIIYDEKDELQENDSAFLQSGTMQYQARDRSSKEQGFFRISQFIWDPADPLF 2177

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLIHRQR
Sbjct: 2178 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKHFELLIHRQR 2237

Query: 267  WLRTNSSLS--NGFFRSNTPSESY 289
            WLRTNSSLS  NGFFRSNTPSESY
Sbjct: 2238 WLRTNSSLSNANGFFRSNTPSESY 2261

[Close]

BLAST of Spg009299 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2042 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2101

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2102 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2161

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2162 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2221

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2222 WLRTNSSLSNGFFRSNTPSESY 2243

[Close]

BLAST of Spg009299 vs. ExPASy TrEMBL
Match: A0A6H0ET42 (Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2041 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2100

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2101 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2160

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2161 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2220

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2221 WLRTNSSLSNGFFRSNTPSESY 2242

[Close]

BLAST of Spg009299 vs. ExPASy TrEMBL
Match: A0A6M3RUH1 (Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2044 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2103

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2104 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2163

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2164 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2223

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2224 WLRTNSSLSNGFFRSNTPSESY 2245

[Close]

BLAST of Spg009299 vs. ExPASy TrEMBL
Match: A0A7G9IT80 (Protein Ycf2 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2044 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2103

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2104 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2163

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2164 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2223

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2224 WLRTNSSLSNGFFRSNTPSESY 2245

[Close]

BLAST of Spg009299 vs. ExPASy TrEMBL
Match: A0A7T3QNV9 (Uncharacterized protein OS=Benincasa hispida OX=102211 GN=ycf2 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYEQYESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY
Sbjct: 2046 RFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 2105

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
            WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2106 WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 2165

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKR FIKNTQEKHFGLLIHRQR
Sbjct: 2166 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRWFIKNTQEKHFGLLIHRQR 2225

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNTPSESY
Sbjct: 2226 WLRTNSSLSNGFFRSNTPSESY 2247

[Close]

BLAST of Spg009299 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-106
Identity = 188/202 (93.07%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYE+YESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRP GFLFDCIERPNELGFPY
Sbjct: 2056 RFLYEKYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPY 2115

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
             A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ RDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2116 SAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLF 2175

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLI RQR
Sbjct: 2176 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQR 2235

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNT SESY
Sbjct: 2236 WLRTNSSLSNGFFRSNTRSESY 2257

[Close]

BLAST of Spg009299 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-106
Identity = 188/202 (93.07%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 87   RFLYEQYESEFAEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY 146
            RFLYE+YESEF EGEGEGVLDPQQIEEDLFNHIVWAPRIWRP GFLFDCIERPNELGFPY
Sbjct: 2056 RFLYEKYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPY 2115

Query: 147  WARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQFIWDPADPLF 206
             A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ RDRSSKEQGFFRISQFIWDPADPLF
Sbjct: 2116 SAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLF 2175

Query: 207  FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDLPTSIYKRRFIKNTQEKHFGLLIHRQR 266
            FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTD PTSIYKR FIKNTQEKHF LLI RQR
Sbjct: 2176 FLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQR 2235

Query: 267  WLRTNSSLSNGFFRSNTPSESY 289
            WLRTNSSLSNGFFRSNT SESY
Sbjct: 2236 WLRTNSSLSNGFFRSNTRSESY 2257

[Close]

BLAST of Spg009299 vs. TAIR 10
Match: ATCG00790.1 (ribosomal protein L16 )

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-43
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1   MKGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTL 60
           +KGISSRGNRICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+
Sbjct: 17  LKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTV 76

Query: 61  RPTETRMGSGKGSPEYWVAVVKPGALRFLYE 92
           RP ETRMGSGKGSPEYWVAVVKPG  + LYE
Sbjct: 77  RPAETRMGSGKGSPEYWVAVVKPG--KILYE 105

[Close]

BLAST of Spg009299 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 )

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-28
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 2   KGISSRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLR 61
           KG+SS+G  IC  RYA+Q LEPAWITSRQIEAGRRAMTRN  RG  + V IF DKPVT+R
Sbjct: 847 KGVSSQG-YIC-SRYALQTLEPAWITSRQIEAGRRAMTRNIGRGLTVRVHIFADKPVTVR 906

Query: 62  PTETRMGSGKGSPEYWVAVVKPGALRFLYE 92
           P ETRMG GKG+P +WVAVVKPG  + +YE
Sbjct: 907 PPETRMGRGKGAPAFWVAVVKPG--KIIYE 932

[Close]

BLAST of Spg009299 vs. TAIR 10
Match: ATMG00080.1 (ribosomal protein L16 )

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-16
Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 2   KGISSRGNRICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGGKIWVRIF 61
           +G    G ++ FGRY  ++ +   ++ R IEA R        RAM+   RR GKIWVR+F
Sbjct: 54  RGCKPDGTKLGFGRYGTKSCKAGRLSYRAIEAARRAIIGHFHRAMSGQFRRNGKIWVRVF 113

Query: 62  PDKPVTLRPTETRMGSGKGSPEYWVAVVKPGALRF 89
            D P+T +PTE RMG GKG+P  W+A V  G + F
Sbjct: 114 ADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPF 148

The following BLAST results are available for this feature:

BLAST of Spg009299 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_010131137.1	3.1e-113	99.01	hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protei...	[more]
YP_009752286.1	3.1e-113	99.01	Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanth...	[more]
YP_009420838.1	3.1e-113	99.01	Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_00...	[more]
QZL38725.1	3.1e-113	99.01	Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhos...	[more]
QJS52308.1	3.1e-113	99.01	hypothetical protein RF2 [Indofevillea khasiana] >QJS52309.1 hypothetical protei...	[more]

BLAST of Spg009299 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1A978	9.4e-113	96.53	Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1	[more]
Q49KT6	3.6e-112	95.54	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
Q09WV7	5.2e-111	95.05	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	1.5e-110	95.05	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
A0ZZ78	1.8e-108	93.63	Protein Ycf2 OS=Gossypium barbadense OX=3634 GN=ycf2-A PE=3 SV=1	[more]

BLAST of Spg009299 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A343F2F1	1.5e-113	99.01	Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ET42	1.5e-113	99.01	Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1	[more]
A0A6M3RUH1	1.5e-113	99.01	Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1	[more]
A0A7G9IT80	1.5e-113	99.01	Protein Ycf2 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf2 PE=3 SV=1	[more]
A0A7T3QNV9	1.5e-113	99.01	Uncharacterized protein OS=Benincasa hispida OX=102211 GN=ycf2 PE=4 SV=1	[more]

BLAST of Spg009299 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	1.8e-106	93.07	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	1.8e-106	93.07	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG00790.1	2.8e-43	89.01	ribosomal protein L16	[more]
AT2G28830.1	3.3e-28	70.00	PLANT U-BOX 12	[more]
ATMG00080.1	1.7e-16	43.16	ribosomal protein L16	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000114	Ribosomal protein L16	PRINTS	PR00060	RIBOSOMALL16	coord: 26..37 score: 71.5 coord: 8..20 score: 47.85 coord: 72..101 score: 37.4 coord: 42..71 score: 67.87
IPR000114	Ribosomal protein L16	TIGRFAM	TIGR01164	TIGR01164	coord: 1..91 e-value: 7.5E-40 score: 133.9
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..99 e-value: 3.7E-40 score: 139.7
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 1..86
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 2..86 e-value: 2.5E-31 score: 108.4
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 7..91 e-value: 1.3564E-40 score: 134.927
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078:SF22	PROTEIN YCF2	coord: 88..288
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 88..288
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00701	RIBOSOMAL_L16_2	coord: 66..77
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00586	RIBOSOMAL_L16_1	coord: 43..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009299.1	Spg009299.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome