Spg000557 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD Homology
BLAST of Spg000557 vs. NCBI nr
Match: XP_038900506.1 (transcription factor TCP16-like [Benincasa hispida]) HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82 Identity = 166/180 (92.22%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of Spg000557 vs. NCBI nr
Match: XP_004145813.1 (transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa_020689 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79 Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0
BLAST of Spg000557 vs. NCBI nr
Match: XP_008465370.1 (PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription factor TCP7 [Cucumis melo var. makuwa] >TYK22396.1 transcription factor TCP7 [Cucumis melo var. makuwa]) HSP 1 Score: 301.2 bits (770), Expect = 5.9e-78 Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Spg000557 vs. NCBI nr
Match: XP_022996075.1 (transcription factor TCP14-like [Cucurbita maxima]) HSP 1 Score: 278.1 bits (710), Expect = 5.3e-71 Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 0
BLAST of Spg000557 vs. NCBI nr
Match: XP_022140679.1 (transcription factor TCP15-like [Momordica charantia]) HSP 1 Score: 275.0 bits (702), Expect = 4.5e-70 Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19 Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19 Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19 Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19 Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18 Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A0A0KDC7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79 Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A5A7T0X8 (Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00200 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78 Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A1S3CNQ2 (transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78 Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A6J1K5P6 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71 Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 0
BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A6J1CGC4 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.2e-70 Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of Spg000557 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor ) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Spg000557 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor ) HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20 Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Spg000557 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 ) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20 Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0
BLAST of Spg000557 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 ) HSP 1 Score: 94.7 bits (234), Expect = 7.8e-20 Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of Spg000557 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor ) HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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