Spg000121 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000121
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold6: 20705288 .. 20710070 (+)
RNA-Seq Expression	Spg000121
Synteny	Spg000121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTAGCCGCCTCGGTTTCGCCTAGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACCCCTCTTCGCCACTGAGGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCTCTTGCTCTCTAGCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAATTTACCTAGCGAAATTTGATCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGATAAATCAAGGCATAAACACAGAAAATTCGGATGGTGACCGCCACCAACGGAGGTCACGAGAAGAAGGCCGGGATCGGCCTCGGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAAGATACTTTGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGAGGGCTCAAGCCTACTGATCGTACAATTTTGAGGAGTCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCAACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTAAACGCACTGAATGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAATTGATCGGGTCGACCCGCCCTTCACAAAAGAAGTCATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCACACCGTACAATGGCAAGAAAGACCCCGTGCAGCATCTAAATACCTACCAAAACTGGATGGACTTCCACGGTGTCTCAGACACAATCAGGTGCCGCGCATTCTTTTTCACCCTGACAGGATCGGCCAAGCATTGGTTTGGAAGGTTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCCTGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACGGCCAGGTGAGAGCTTGCGTGATTATATAACACGTTTTAATGACGAAGCACTGCAAGTTGAGGGGTACAGCGAGGGAGCAGCCCTGGTAGCCATAACAGCCGGACTGGAAGACGAGAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTACGCAGAGTTTGTCTCCCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTACATTTGACCGAACATTAATAAAAGTGATGTATTATTCAATGTTTGTATTATATCTTGTCTTATTAACCCTAATCCAATAAACTAAACATCCAAGGCTAATAGAATGAGGCTTGAACTAGTATGTAGGGACATACGGGGATCAATGTTCAAGTTTTAGCCTAAAGGGTCTGTAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGGCCCGCTTTGTATATTGATACAAACGTAGTGATCCAACGCGTTCATGTAGTTGACATGCTAGTGGGGGTATCCTGTGCAATGAGTTTGCACAAAGACCGGACCGCGAAATAGTTAACCACTAACTGTAACACCGTTAGTTAGCTCGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGCCTTAATCTTGAGTGGATTATGGACTCCTGTCCATGAAGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAGTCTTACAAGATGGAATTCACTCCTTCCCGATATTAAGGTAAGTAGAGGTGTGTTCCCTTAAGTGGTGACTCCGGGTCTTGGACAATGGGCCCTACCCTCTCTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGTAGCCCAGGGGTAAAACGGTAATTTGACCTAGCTGGGGTACGAACACACGTGAAGGGCTAACTTGCTGTTGATGGTCAATATCCGTGGACACAGAAATATATCTGCAGTGAGAAGAGTGCAGCTGTGGTTCTTTAGTGGAGTGAACCACAGTTAACGAACACTGGTTAATTTGGTTAATGAGTTTAGCCAATTAATCTTATATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGATCCCACCGGTAGCTCCATTGGGGCGTTGAGTAAAATTTCTAAGGGGAGTTATATATTTGAAGGGGTTCAAATATCTTATTAAAGTATGAATATGATTCATAATAAAAAACTATAGGTTATAATTAATGCTCATATGATGAATATTAATTCTATAGTTTATTTGAGAGAAACATGATTAAATATATGATATTTAATTGAATATTAATTAATTGGTGAATTAATTAATATTGATGTTTTAATTTATTTTAATTAAATTATGATTTAATTAAGGTATATTAAAACTTTGGGTTATGAGGGATATGTGCATGAAAGTGTTCATGTGACAATAATTAAATTAAATATTTTTTTTAATTATTATTTAATTTAATTAACTGATCAGTTAAAGAACTGATCAGTCAACCACTCCCCTAACCCTACACACGTGAATGGGAGGGTTTTAAGGGAGTGGGAGGTTATTCTTCAGATAATCTCACGTTAACTCTCTCCCTCTCTCTCACGCAAGATCGCTCTCTCTCTGAAAAATTCTCTGGGTTCCTAAGAATTTGCAGAGGCCAAAATTCTCCCTTTTGATCTTAGAATTTTTGGTTCCCACAAGCCACTCAACACTAATTCCAAGGAGAATACCGGTGTAACTTCGTGGTGGTGTTCGTGAGCAATTTGCAGCATTAGAAGGGTACGTTCTTGCTGCTGGAATTTTCGGATTCAACGTGGTTTTGTTGGCGAAACGGTCAAGAACAACTTCTAAAGTAAGTATTCTTGATCCCGGGTCAATAGGATCCAATATTGTTTAGATCTAAAATGTTTAGAGTCTTTTAATGCATGTTTTATACAGTTTTACAGCATGTTTTGTGTATGTTTTATTGCTGTAAAACCTTTGCAAATTGTACTGGTATTTTAATGTTGAGTAAAACACAGTATGGTTAATGATCGTTTCCGCTGCGCTAGGGCTTTAATCCCTGCAAACACAAGAGGTCTTCTTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAACGGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACAGGACTCCTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAGAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAGTTCATCGGTGAGCCCAAGGCAGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAGCAATGTTCGAACCGGAGTATAGAGGTATGTACTCTGTCCATCTATCAAAGGCGCCCCCCCCTTTGGAGTTCACCGAGGCTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCCCTGGTGGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAGCCTTTAAAGCCATGCAGTTAGAGAGGGAACTCTTAAAACCAAGCCTTACCCCACTTGTAGGATTTGGGGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGAGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCTGAATGGTGTGGGAGTTGTCAAAGGAGAACAGAAGGAATCAAAAGAGTGTTACTGGACCGCGCTGAAAACAGTTAAACCACAGAGGGCCGAGGCTGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

mRNA sequence

ATGCTTCTAGCCGCCTCGGTTTCGCCTAGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGATAAATCAAGGCATAAACACAGAAAATTCGGATGGTGACCGCCACCAACGGAGGTCACGAGAAGAAGGCCGGGATCGGCCTCGGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAAGATACTTTGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGAGGGCTCAAGCCTACTGATCGTACAATTTTGAGGAGTCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCAACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTAAACGCACTGAATGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAATTGATCGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAGTCTTACAAGATGGAATTCACTCCTTCCCGATATTAAGGTAAGTAGAGCATTAGAAGGGTACGTTCTTGCTGCTGGAATTTTCGGATTCAACGTGGTTTTGTTGGCGAAACGGTCAAGAACAACTTCTAAAGGCTTTAATCCCTGCAAACACAAGAGGTCTTCTTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAACGGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACAGGACTCCTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAGAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAGTTCATCGGTGAGCCCAAGGCAGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAGCAATGTTCGAACCGGAGTATAGAGTTAAACCACAGAGGGCCGAGGCTGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

Coding sequence (CDS)

ATGCTTCTAGCCGCCTCGGTTTCGCCTAGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGATAAATCAAGGCATAAACACAGAAAATTCGGATGGTGACCGCCACCAACGGAGGTCACGAGAAGAAGGCCGGGATCGGCCTCGGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAAGATACTTTGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGAGGGCTCAAGCCTACTGATCGTACAATTTTGAGGAGTCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCAACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTAAACGCACTGAATGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAATTGATCGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAGTCTTACAAGATGGAATTCACTCCTTCCCGATATTAAGGTAAGTAGAGCATTAGAAGGGTACGTTCTTGCTGCTGGAATTTTCGGATTCAACGTGGTTTTGTTGGCGAAACGGTCAAGAACAACTTCTAAAGGCTTTAATCCCTGCAAACACAAGAGGTCTTCTTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAACGGACCGACGAGGGAGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACAGGACTCCTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAGAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAGTTCATCGGTGAGCCCAAGGCAGAGGCCGACCAGGGATGGCCGAGGCCGAGGCCGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAGCAATGTTCGAACCGGAGTATAGAGTTAAACCACAGAGGGCCGAGGCTGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

Protein sequence

MLLAASVSPSLSRNASEFLKTLGARAVGAVCGEESLPNLHIGHSMSKGMEKINQGINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKFAALENKVSAMDHNLSKILCILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTSSMTSKIRGLKPTDRTILRSPESSTLRGRDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALNELGNPQGDLQKSRDLGDQDLEELIDRDCPLICTGESGLFADSISLPFWGQDRVGSWEHSLTRWNSLLPDIKVSRALEGYVLAAGIFGFNVVLLAKRSRTTSKGFNPCKHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREAMFEPEYRVKPQRAEADQRMSRGRAGHTSTDTESELMEF

Homology

[Close]

BLAST of Spg000121 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-32
Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      SR +K+ R+ +          P  KFEKYTPT VP EQVLMEI++  LL
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQ--------KDPPRKFEKYTPTTVPIEQVLMEIKDQRLL 427

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P RMK++  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE++ EPKA   
Sbjct: 428 KWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA--- 487

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                   T++G   + P REIRTI GGP    S RKRKA VREA
Sbjct: 488 --------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

[Close]

BLAST of Spg000121 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 3.9e-30
Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      SR +K+ R+ +          P  KFEKYTPT VP EQVLMEI++  LL
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQ--------KDPPRKFEKYTPTTVPLEQVLMEIKDQRLL 211

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E++ EPKA   
Sbjct: 212 KWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA--- 271

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                   T++G  ++ P REIRTI GGP    S+RKRKA VREA
Sbjct: 272 --------TQNGESEKSPAREIRTIMGGPIERESARKRKADVREA 297

[Close]

BLAST of Spg000121 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-29
Identity = 82/168 (48.81%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 379 KRSSSSDHDSRK-----DKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT 438
           KR S+     +K     DK Q +    R R  +  P  KFEKYT T VP EQVLMEI+N 
Sbjct: 182 KRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQ 241

Query: 439 GLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKA 498
            LLK+P RM ++  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE++ EPKA
Sbjct: 242 RLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKA 301

Query: 499 EADQGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                      T++G   + P REIRTI GGP    S RKRK  VREA
Sbjct: 302 -----------TQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREA 338

[Close]

BLAST of Spg000121 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 2.1e-28
Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      S+ +K+ R   G +  P       KFEKYTPT VP EQVLMEI++  LL
Sbjct: 52  KRERSGEKPLSSKWEKQDRV-VGQKDLP------RKFEKYTPTTVPLEQVLMEIKDQRLL 111

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE++ + KA   
Sbjct: 112 KWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA--- 171

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREAMFEP 546
                  P ++  D + P REIRTI GG     S RKRKA VREA   P
Sbjct: 172 ------TPNRE-NDNKSPTREIRTIMGGSTEQESDRKRKASVREARDGP 203

[Close]

BLAST of Spg000121 vs. NCBI nr
Match: XP_022152370.1 (uncharacterized protein LOC111020115 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-24
Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT--- 436
           K K    S   SR D ++      R RP        +E+YTPT +P  ++L  I  +   
Sbjct: 68  KSKDKGPSSSSSRDDYRRSDSTHNRSRP--------YERYTPTTIPISEILTNIEESEME 127

Query: 437 GLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKA 496
            LLK P +++ +P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+F+G+P++
Sbjct: 128 KLLKRPEKLRGDPEKRNKDKYCLFHRDHGHSTSNCWELKRQIEDLIQDDYFKKFVGKPRS 187

Query: 497 -EADQGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREAMFE 545
             A++   R R     R K+ P   I TIFGGP+GG S  KRK + REA  E
Sbjct: 188 NSAEKKDERKRSRLPPRRKDRP-AVINTIFGGPSGGQSGNKRKELAREARRE 230

[Close]

BLAST of Spg000121 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-33
Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      SR +K+ R+ +          P  KFEKYTPT VP EQVLMEI++  LL
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQ--------KDPPRKFEKYTPTTVPIEQVLMEIKDQRLL 427

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P RMK++  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE++ EPKA   
Sbjct: 428 KWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA--- 487

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                   T++G   + P REIRTI GGP    S RKRKA VREA
Sbjct: 488 --------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

[Close]

BLAST of Spg000121 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-30
Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      SR +K+ R+ +          P  KFEKYTPT VP EQVLMEI++  LL
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQ--------KDPPRKFEKYTPTTVPLEQVLMEIKDQRLL 211

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E++ EPKA   
Sbjct: 212 KWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA--- 271

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                   T++G  ++ P REIRTI GGP    S+RKRKA VREA
Sbjct: 272 --------TQNGESEKSPAREIRTIMGGPIERESARKRKADVREA 297

[Close]

BLAST of Spg000121 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.4e-30
Identity = 82/168 (48.81%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 379 KRSSSSDHDSRK-----DKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT 438
           KR S+     +K     DK Q +    R R  +  P  KFEKYT T VP EQVLMEI+N 
Sbjct: 182 KRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQ 241

Query: 439 GLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKA 498
            LLK+P RM ++  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE++ EPKA
Sbjct: 242 RLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKA 301

Query: 499 EADQGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREA 542
                      T++G   + P REIRTI GGP    S RKRK  VREA
Sbjct: 302 -----------TQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREA 338

[Close]

BLAST of Spg000121 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-28
Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLL 436
           K +RS      S+ +K+ R   G +  P       KFEKYTPT VP EQVLMEI++  LL
Sbjct: 52  KRERSGEKPLSSKWEKQDRV-VGQKDLP------RKFEKYTPTTVPLEQVLMEIKDQRLL 111

Query: 437 KFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEAD 496
           K+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE++ + KA   
Sbjct: 112 KWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA--- 171

Query: 497 QGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREAMFEP 546
                  P ++  D + P REIRTI GG     S RKRKA VREA   P
Sbjct: 172 ------TPNRE-NDNKSPTREIRTIMGGSTEQESDRKRKASVREARDGP 203

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BLAST of Spg000121 vs. ExPASy TrEMBL
Match: A0A6J1DDR5 (uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020115 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.3e-25
Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 377 KHKRSSSSDHDSRKDKKQRTDEGGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT--- 436
           K K    S   SR D ++      R RP        +E+YTPT +P  ++L  I  +   
Sbjct: 68  KSKDKGPSSSSSRDDYRRSDSTHNRSRP--------YERYTPTTIPISEILTNIEESEME 127

Query: 437 GLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKA 496
            LLK P +++ +P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+F+G+P++
Sbjct: 128 KLLKRPEKLRGDPEKRNKDKYCLFHRDHGHSTSNCWELKRQIEDLIQDDYFKKFVGKPRS 187

Query: 497 -EADQGWPRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVREAMFE 545
             A++   R R     R K+ P   I TIFGGP+GG S  KRK + REA  E
Sbjct: 188 NSAEKKDERKRSRLPPRRKDRP-AVINTIFGGPSGGQSGNKRKELAREARRE 230

The following BLAST results are available for this feature:

BLAST of Spg000121 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	1.1e-32	50.30	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	3.9e-30	48.48	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022142767.1	1.9e-29	48.81	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159192.1	2.1e-28	47.93	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022152370.1	1.1e-24	42.44	uncharacterized protein LOC111020115 [Momordica charantia]	[more]

BLAST of Spg000121 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg000121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	5.3e-33	50.30	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	1.9e-30	48.48	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	9.4e-30	48.81	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DZ52	1.0e-28	47.93	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDR5	5.3e-25	42.44	uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Spg000121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 204..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 548..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 378..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000121.1	Spg000121.1	mRNA