HG10002772 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGTCCTCGACAAAGTTTGCAATCTTGCTCCTAATGTTCTTCATTGCCTCTGGTATATAAATCAATTTTAATTAATTATATCCAATATTTTTTCTCTTTTCGCAATAGATATCTTATTCTATGACAATTAACAAGTAAACTATTTTAGAGACATTGTTCGTGTTAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGTACTGTGATTGCAAGGTCAACCTATGTTTTTGCCACCCAGGATCCGAAAAGAAATTTCTTGACAAAGCCTTTCCTGAATATTTGGGAGAAGAAAAGACAACTCCTTGA ATGGAGAAGTCCTCGACAAAGTTTGCAATCTTGCTCCTAATGTTCTTCATTGCCTCTGAGACATTGTTCGTGTTAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGTACTGTGATTGCAAGGTCAACCTATGTTTTTGCCACCCAGGATCCGAAAAGAAATTTCTTGACAAAGCCTTTCCTGAATATTTGGGAGAAGAAAAGACAACTCCTTGA ATGGAGAAGTCCTCGACAAAGTTTGCAATCTTGCTCCTAATGTTCTTCATTGCCTCTGAGACATTGTTCGTGTTAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGTACTGTGATTGCAAGGTCAACCTATGTTTTTGCCACCCAGGATCCGAAAAGAAATTTCTTGACAAAGCCTTTCCTGAATATTTGGGAGAAGAAAAGACAACTCCTTGA MEKSSTKFAILLLMFFIASETLFVLDARNVVNIPCKSRIDCSDPWYCDCKVNLCFCHPGSEKKFLDKAFPEYLGEEKTTP Homology
BLAST of HG10002772 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 4.0e-26 Identity = 63/80 (78.75%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of HG10002772 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 4.9e-24 Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of HG10002772 vs. NCBI nr
Match: RQP00499.1 (hypothetical protein POPTR_015G021450 [Populus trichocarpa]) HSP 1 Score: 57.0 bits (136), Expect = 8.7e-05 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of HG10002772 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao]) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of HG10002772 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius]) HSP 1 Score: 54.7 bits (130), Expect = 4.3e-04 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of HG10002772 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27 Identity = 65/80 (81.25%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of HG10002772 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24 Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of HG10002772 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.2e-09 Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0
BLAST of HG10002772 vs. ExPASy TrEMBL
Match: A0A3N7HLC3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G021450 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.2e-05 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of HG10002772 vs. ExPASy TrEMBL
Match: A0A061GY75 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.2e-05 Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|