HG10015383 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015383
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	cell division topological specificity factor homolog, chloroplastic
Location	Chr02: 26225556 .. 26226113 (-)
RNA-Seq Expression	HG10015383
Synteny	HG10015383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCAAAATGGCACACCATGGCACATGAAAATGATAGCATACATAGTATCTCCTTGGAAGATGTTGAGAGCTCAGCAAATTATGATCGATCACCAAAATCCTTAAGCCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACTCCTAAATTGAACTCTAATGCTACGATTGCTAAGCAGCGGTTAAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGATGAAGCTAAACAAAAGATTGTGGACAACATTTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGGAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGGAGCAACCACGAATATAGACTTGAAAGACGATGGAGAAGAATCTGGCTCTGCAGGTCTCATTTTCGATTCATTAATTGCAGATGGAAAAGGTTCTTCTTAA

mRNA sequence

ATGAAGCCAAAATGGCACACCATGGCACATGAAAATGATAGCATACATAGTATCTCCTTGGAAGATGTTGAGAGCTCAGCAAATTATGATCGATCACCAAAATCCTTAAGCCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACTCCTAAATTGAACTCTAATGCTACGATTGCTAAGCAGCGGTTAAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGATGAAGCTAAACAAAAGATTGTGGACAACATTTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGGAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGGAGCAACCACGAATATAGACTTGAAAGACGATGGAGAAGAATCTGGCTCTGCAGGTCTCATTTTCGATTCATTAATTGCAGATGGAAAAGGTTCTTCTTAA

Coding sequence (CDS)

ATGAAGCCAAAATGGCACACCATGGCACATGAAAATGATAGCATACATAGTATCTCCTTGGAAGATGTTGAGAGCTCAGCAAATTATGATCGATCACCAAAATCCTTAAGCCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACTCCTAAATTGAACTCTAATGCTACGATTGCTAAGCAGCGGTTAAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGATGAAGCTAAACAAAAGATTGTGGACAACATTTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGGAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGGAGCAACCACGAATATAGACTTGAAAGACGATGGAGAAGAATCTGGCTCTGCAGGTCTCATTTTCGATTCATTAATTGCAGATGGAAAAGGTTCTTCTTAA

Protein sequence

MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRIIFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADGKGSS

Homology

[Close]

BLAST of HG10015383 vs. NCBI nr
Match: XP_008446409.1 (PREDICTED: cell division topological specificity factor homolog, chloroplastic [Cucumis melo] >KAA0034453.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa] >TYK17681.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 322.0 bits (824), Expect = 3.3e-84
Identity = 168/183 (91.80%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 2   KPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRII 61
           +PKWHTMAHENDS+HSISLE+VE+SA Y++S KSLSQESFILSSMNMNFLERL LAWRII
Sbjct: 46  RPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRII 105

Query: 62  FPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 121
           FPSS PK+ SNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
Sbjct: 106 FPSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 165

Query: 122 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADG 181
           NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGA TN DLKDDGEESGSAGLIFDSL+ADG
Sbjct: 166 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADG 225

Query: 182 KGS 185
           KGS
Sbjct: 226 KGS 228

[Close]

BLAST of HG10015383 vs. NCBI nr
Match: XP_004135443.3 (cell division topological specificity factor homolog, chloroplastic [Cucumis sativus] >KAE8648758.1 hypothetical protein Csa_007843 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 5.3e-82
Identity = 163/181 (90.06%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 2   KPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRII 61
           +PKWHTM+HENDS+HSISLE+VESS NY+RS KSLS+ESFILSSMNMNFLERL LAWRII
Sbjct: 46  RPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILSSMNMNFLERLTLAWRII 105

Query: 62  FPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 121
           FPSS PK+ SNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
Sbjct: 106 FPSSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 165

Query: 122 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADG 181
           NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVG   N +LKDDGEESGSAGLIFDSL+ADG
Sbjct: 166 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDDGEESGSAGLIFDSLVADG 225

Query: 182 K 183
           K
Sbjct: 226 K 226

[Close]

BLAST of HG10015383 vs. NCBI nr
Match: KAG6601459.1 (Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 158/183 (86.34%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 1   MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRI 60
           +KPKW TMAHEND+IHSIS +DVESSA+Y+RSP+SLSQESFILSSM MNFLERLILAWRI
Sbjct: 45  IKPKWRTMAHENDTIHSISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRI 104

Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           IFPSST K NSNA IAKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQ
Sbjct: 105 IFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQ 164

Query: 121 FNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 180
           FNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+GAT N +LKDDGE SGSAG IFDSLIA+
Sbjct: 165 FNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAE 224

Query: 181 GKG 184
           GKG
Sbjct: 225 GKG 227

[Close]

BLAST of HG10015383 vs. NCBI nr
Match: XP_023551705.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023551706.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 159/182 (87.36%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 1   MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRI 60
           +KPKW TMAHENDSIHSIS +DVESSA+Y+RSP+SLSQESFILSSM MNFLERLILAWRI
Sbjct: 45  IKPKWRTMAHENDSIHSISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRI 104

Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           IFPSST K NSNA IAKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQ
Sbjct: 105 IFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQ 164

Query: 121 FNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 180
           FNVSTD DLRTIYSVTVPVRRVKA+YQGSEEVGAT N +LKDDGE SGSAG IFDSLIA+
Sbjct: 165 FNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAE 224

Query: 181 GK 183
           GK
Sbjct: 225 GK 226

[Close]

BLAST of HG10015383 vs. NCBI nr
Match: XP_022996852.1 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 158/183 (86.34%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRI 60
           +KPKW TMAHEND IHSIS +DVESSA+Y+RSP+SLSQESFILSSM MNFLERLILAWRI
Sbjct: 45  IKPKWRTMAHENDRIHSISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRI 104

Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           IFPSST K NSNA IAKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQ
Sbjct: 105 IFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQ 164

Query: 121 FNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 180
           FNVSTD DLRTIYSVTVPVRRVKA+YQGSEEVGAT N +LKDDGE SG AG IFDSLIA+
Sbjct: 165 FNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAE 224

Query: 181 GKG 184
           GKG
Sbjct: 225 GKG 227

[Close]

BLAST of HG10015383 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 92/158 (58.23%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 25  SSANYDRSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPSSTPKLNSNATIAKQRLKM 84
           ++ +Y+ SP    Q  ESF+ +++NM F +RL LAW+IIFPS   + +SNA IAKQRLKM
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNARIAKQRLKM 133

Query: 85  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRV 144
           IL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRRV
Sbjct: 134 ILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRV 193

Query: 145 KAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 181
           K EYQ  +E G  TN++ KD     GS  + FD  + +
Sbjct: 194 KPEYQDVDEAGTITNVEYKD--TRDGSVDVRFDFYVPE 229

[Close]

BLAST of HG10015383 vs. ExPASy Swiss-Prot
Match: Q31PU2 (Cell division topological specificity factor OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=minE PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           +F    P+  ++    KQRLK++L  DR  ++ E  QK+   IL  +S +VE+DSE    
Sbjct: 5   LFERLFPRQQASRDTVKQRLKLVLAHDRADLSPELLQKMRQEILEVVSRYVELDSEG--- 64

Query: 121 FNVSTDLDLR-TIYSVTVPVRRVK 144
             +S + D R T     +P+RRVK
Sbjct: 65  MELSLENDQRVTALVANLPIRRVK 85

[Close]

BLAST of HG10015383 vs. ExPASy Swiss-Prot
Match: Q5N4D6 (Cell division topological specificity factor OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=minE PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           +F    P+  ++    KQRLK++L  DR  ++ E  QK+   IL  +S +VE+DSE    
Sbjct: 5   LFERLFPRQQASRDTVKQRLKLVLAHDRADLSPELLQKMRQEILEVVSRYVELDSEG--- 64

Query: 121 FNVSTDLDLR-TIYSVTVPVRRVK 144
             +S + D R T     +P+RRVK
Sbjct: 65  MELSLENDQRVTALVANLPIRRVK 85

[Close]

BLAST of HG10015383 vs. ExPASy TrEMBL
Match: A0A5A7SVD6 (Cell division topological specificity factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00060 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 168/183 (91.80%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 2   KPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRII 61
           +PKWHTMAHENDS+HSISLE+VE+SA Y++S KSLSQESFILSSMNMNFLERL LAWRII
Sbjct: 46  RPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRII 105

Query: 62  FPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 121
           FPSS PK+ SNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
Sbjct: 106 FPSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 165

Query: 122 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADG 181
           NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGA TN DLKDDGEESGSAGLIFDSL+ADG
Sbjct: 166 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADG 225

Query: 182 KGS 185
           KGS
Sbjct: 226 KGS 228

[Close]

BLAST of HG10015383 vs. ExPASy TrEMBL
Match: A0A1S3BEH9 (cell division topological specificity factor homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489163 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 168/183 (91.80%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 2   KPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRII 61
           +PKWHTMAHENDS+HSISLE+VE+SA Y++S KSLSQESFILSSMNMNFLERL LAWRII
Sbjct: 46  RPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRII 105

Query: 62  FPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 121
           FPSS PK+ SNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
Sbjct: 106 FPSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 165

Query: 122 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADG 181
           NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGA TN DLKDDGEESGSAGLIFDSL+ADG
Sbjct: 166 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADG 225

Query: 182 KGS 185
           KGS
Sbjct: 226 KGS 228

[Close]

BLAST of HG10015383 vs. ExPASy TrEMBL
Match: A0A0A0KQS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83
Identity = 165/183 (90.16%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 2   KPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRII 61
           +PKWHTM+HENDS+HSISLE+VESS NY+RS KSLS+ESFILSSMNMNFLERL LAWRII
Sbjct: 46  RPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILSSMNMNFLERLTLAWRII 105

Query: 62  FPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 121
           FPSS PK+ SNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
Sbjct: 106 FPSSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF 165

Query: 122 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIADG 181
           NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVG   N +LKDDGEESGSAGLIFDSL+ADG
Sbjct: 166 NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDDGEESGSAGLIFDSLVADG 225

Query: 182 KGS 185
           KGS
Sbjct: 226 KGS 228

[Close]

BLAST of HG10015383 vs. ExPASy TrEMBL
Match: A0A6J1K368 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.6e-78
Identity = 158/183 (86.34%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRI 60
           +KPKW TMAHEND IHSIS +DVESSA+Y+RSP+SLSQESFILSSM MNFLERLILAWRI
Sbjct: 45  IKPKWRTMAHENDRIHSISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRI 104

Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           IFPSST K NSNA IAKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQ
Sbjct: 105 IFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQ 164

Query: 121 FNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 180
           FNVSTD DLRTIYSVTVPVRRVKA+YQGSEEVGAT N +LKDDGE SG AG IFDSLIA+
Sbjct: 165 FNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAE 224

Query: 181 GKG 184
           GKG
Sbjct: 225 GKG 227

[Close]

BLAST of HG10015383 vs. ExPASy TrEMBL
Match: A0A6J1H0C0 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458787 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 156/182 (85.71%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 1   MKPKWHTMAHENDSIHSISLEDVESSANYDRSPKSLSQESFILSSMNMNFLERLILAWRI 60
           +KPKW TMAHENDSIH IS +DVESSA+Y+RSP+SLSQESFILSSM MNFLERLILAWRI
Sbjct: 45  IKPKWRTMAHENDSIHGISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRI 104

Query: 61  IFPSSTPKLNSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQ 120
           IFPSST K NSNA IAKQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQ
Sbjct: 105 IFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQ 164

Query: 121 FNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 180
           FNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+GAT N +LKDDGE SGSAG IFD+LIA+
Sbjct: 165 FNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDALIAE 224

Query: 181 GK 183
           GK
Sbjct: 225 GK 226

[Close]

BLAST of HG10015383 vs. TAIR 10
Match: AT1G69390.1 (homologue of bacterial MinE 1 )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 92/158 (58.23%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 25  SSANYDRSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPSSTPKLNSNATIAKQRLKM 84
           ++ +Y+ SP    Q  ESF+ +++NM F +RL LAW+IIFPS   + +SNA IAKQRLKM
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNARIAKQRLKM 133

Query: 85  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRV 144
           IL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRRV
Sbjct: 134 ILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRV 193

Query: 145 KAEYQGSEEVGATTNIDLKDDGEESGSAGLIFDSLIAD 181
           K EYQ  +E G  TN++ KD     GS  + FD  + +
Sbjct: 194 KPEYQDVDEAGTITNVEYKD--TRDGSVDVRFDFYVPE 229

The following BLAST results are available for this feature:

BLAST of HG10015383 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446409.1	3.3e-84	91.80	PREDICTED: cell division topological specificity factor homolog, chloroplastic [...	[more]
XP_004135443.3	5.3e-82	90.06	cell division topological specificity factor homolog, chloroplastic [Cucumis sat...	[more]
KAG6601459.1	2.7e-78	86.34	Cell division topological specificity factor-like, chloroplastic, partial [Cucur...	[more]
XP_023551705.1	2.7e-78	87.36	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]
XP_022996852.1	1.8e-77	86.34	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]

BLAST of HG10015383 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C4Z7	1.8e-40	58.23	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]
Q31PU2	4.6e-04	35.71	Cell division topological specificity factor OS=Synechococcus elongatus (strain ...	[more]
Q5N4D6	4.6e-04	35.71	Cell division topological specificity factor OS=Synechococcus sp. (strain ATCC 2...	[more]

BLAST of HG10015383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVD6	1.6e-84	91.80	Cell division topological specificity factor-like protein OS=Cucumis melo var. m...	[more]
A0A1S3BEH9	1.6e-84	91.80	cell division topological specificity factor homolog, chloroplastic OS=Cucumis m...	[more]
A0A0A0KQS2	3.0e-83	90.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1	[more]
A0A6J1K368	8.6e-78	86.34	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A6J1H0C0	1.1e-77	85.71	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]

BLAST of HG10015383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69390.1	1.3e-41	58.23	homologue of bacterial MinE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 73..140 e-value: 2.8E-14 score: 52.9
IPR005527	Cell division topological specificity factor MinE	PANTHER	PTHR33404	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 3..169
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 60..139 e-value: 2.7E-8 score: 35.4
None	No IPR available	PANTHER	PTHR33404:SF2	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 3..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015383.1	HG10015383.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0051301	cell division