HG10021843 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021843
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S acidic ribosomal protein P0
Location	Chr05: 17482383 .. 17484693 (+)
RNA-Seq Expression	HG10021843
Synteny	HG10021843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCAAGCCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTCCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCCAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGCTCCATCAGAATCCATTCTGAAAAGACTGGTAACACCGCCGTCATGAACCTCCTCCCCCATCTTGTGGTACGGATTCCCCCCTCTCTTTAACTCGACTTTGATTTTTGTTGTGTCTTGTTAATCTCAACGAGATTTCTTCGATCCATAGGGAAACGTCGGTTTGATCTTCACTAAAGGCGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTATATAGATATTGTGTTTTTCGGTTTTATTTCATTTTCGCTTTGTACTTTGTGCTATGATATCCATGTACATTGTCTAAGGCTAGATTGGTAATTTCCGTAAAAGTTATGTGCTAGTTTTCAGATTTGTCTTTTACTTAATTCTTCTGATAAAAGAGTTATCATTGTAAATATAAACTGCTGATTATTTCACGATGATAATCTTATGATGGTTTGTTGATATAAATGAATTGATCATCCTTGAGAAATGTAGAAGACTTGAATGAAACTGTATCATATTTGTAATAATCAAGTGAATAGGTATCCCTTCTGAAAGTTGAAACCACAAATTGTGTTGTGAAAAAAAATTGTGACAATTTTAAATAATAATGTTCAAGCAAATGTGACTCAAGATTTATTATATGGATGCCTGCAGTTTATGGTTCAGTTTAGTTGGATTATTTGGAAGAAGTTTGTCCTATCTATTTTGGTTTTAAAGATTCAACCTTTAGTTTGTTTTCAAATTATTCAATGAGACAACCACAATCACAATGTAAATAATAATTGTTGGATGCCTCTTAATAATTGTTGGATATAAACTTGAGGTACTTCTATCTCGTCAACGGAGAAAGTGCATGGCTGCCTCCTCGAATAATTTGAATGCCCACACTCCATATTGTTTATTTGGACAATTTGTATACATGATTTGCATTTATTGAAATAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCGCCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTTTCTTATAAACTAATTACCTCCATTTTTAAACCATTCAACTTGGAAAGGATCTCAACTTGAAGGTTGAATTGATCTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGAGCTAATCAAGAAAGGAGAAAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGACAATGGTTCTGTTTTCGATCCTGAGGTGCTTGATCTTACAGAAGAAGATCTTCTAGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGCTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGTTTGTTTAAACACCTTTACATATCAAAGTCTTAGATATAATTTTGATGCCTGAAGTTCTGGTTTTCAACCACTTTCAATTTAGATCCAGTTTTGATTCTAAAGTTTTGTTTTGATCTTTTTAATTACTTTCTAAATTAGACCTTCTTTTAACAGCTAAAACCTCAACCTCAGCCTTCAAATTTATAAAGTTTTACATTCATTAATCCCTATGATAGAACTGATGATCTGAATAAGTCCGAAAATTTAACTAAATAACTAACTATATATATATATATATATTGATTACGACAAATGGGGTGGAAGTTCCTACCAACTTTTGATATGGCATATTTTTATGGACATTTTAGTGGAACCACTTATCTTATACATTTTAGTAGGATCCATCTATCTGTAAAAAGCAGTAGTAAAAATTATTTATGAACTTGGAAGGAGTTTATATTTTAAAATGGTATGACAAAAATTTTGTAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTGGTGCGGTGGCCGAGTCTGGAGACGCTGCCTCAGCAGCTGCGGCCCCTGCTGCTAAGGAAGAAAAGAAGGAAGAATCAGACGAAGAGTCGGAAGGAGATATGATCATGGGTTTGTTTGATTGA

mRNA sequence

ATGGTTCTCAAGCCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTCCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCCAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGCTCCATCAGAATCCATTCTGAAAAGACTGGTAACACCGCCGTCATGAACCTCCTCCCCCATCTTGTGGGAAACGTCGGTTTGATCTTCACTAAAGGCGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCGCCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGAGCTAATCAAGAAAGGAGAAAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGACAATGGTTCTGTTTTCGATCCTGAGGTGCTTGATCTTACAGAAGAAGATCTTCTAGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGCTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTGGTGCGGTGGCCGAGTCTGGAGACGCTGCCTCAGCAGCTGCGGCCCCTGCTGCTAAGGAAGAAAAGAAGGAAGAATCAGACGAAGAGTCGGAAGGAGATATGATCATGGGTTTGTTTGATTGA

Coding sequence (CDS)

ATGGTTCTCAAGCCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTCCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCCAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGCTCCATCAGAATCCATTCTGAAAAGACTGGTAACACCGCCGTCATGAACCTCCTCCCCCATCTTGTGGGAAACGTCGGTTTGATCTTCACTAAAGGCGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCGCCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGAGCTAATCAAGAAAGGAGAAAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGACAATGGTTCTGTTTTCGATCCTGAGGTGCTTGATCTTACAGAAGAAGATCTTCTAGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGCTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTGGTGCGGTGGCCGAGTCTGGAGACGCTGCCTCAGCAGCTGCGGCCCCTGCTGCTAAGGAAGAAAAGAAGGAAGAATCAGACGAAGAGTCGGAAGGAGATATGATCATGGGTTTGTTTGATTGA

Protein sequence

MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKLGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAPHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPAAKEEKKEESDEESEGDMIMGLFD

Homology

[Close]

BLAST of HG10021843 vs. NCBI nr
Match: XP_038895318.1 (60S acidic ribosomal protein P0-like [Benincasa hispida])

HSP 1 Score: 568.9 bits (1465), Expect = 2.7e-158
Identity = 306/324 (94.44%), Postives = 315/324 (97.22%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK  YDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKAQYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+AV NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNSAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALAVAVAT+YSFPQADEIKE+LKDP+KFAAAAAP AVAESG A  AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATDYSFPQADEIKEYLKDPNKFAAAAAPAAVAESGGA--AAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
           AA+EEKKEE +EES+ DMIMGLFD
Sbjct: 301 AAQEEKKEEPEEESDEDMIMGLFD 322

[Close]

BLAST of HG10021843 vs. NCBI nr
Match: XP_022150896.1 (60S acidic ribosomal protein P0-like [Momordica charantia])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 298/324 (91.98%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTAVM+L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL+VLSVYDNGSVF PEVLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLAAA
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALAVAVATEYSFPQA+E+KEFLKDPSKFAA AAP A AESG AA AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
           AAKEE KEE  EES+ DMIMGLFD
Sbjct: 301 AAKEE-KEEPAEESDEDMIMGLFD 323

[Close]

BLAST of HG10021843 vs. NCBI nr
Match: XP_022964942.1 (60S acidic ribosomal protein P0-like [Cucurbita moschata] >XP_023520060.1 60S acidic ribosomal protein P0-like [Cucurbita pepo subsp. pepo] >KAG6583371.1 60S acidic ribosomal protein P0-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019142.1 60S acidic ribosomal protein P0-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 298/324 (91.98%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MV+KPTRAQKKT YD+KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVVKPTRAQKKTQYDKKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+AVMNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP A  ESG  ASAAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESG-GASAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
            A+EEK  E +EES+GDMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of HG10021843 vs. NCBI nr
Match: XP_022970458.1 (60S acidic ribosomal protein P0-like [Cucurbita maxima])

HSP 1 Score: 551.6 bits (1420), Expect = 4.5e-153
Identity = 298/324 (91.98%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT YD KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTQYDNKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+AVMNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP A  ESG  A AAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESG-GAPAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
            A+EEK  E +EES+GDMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of HG10021843 vs. NCBI nr
Match: XP_004145258.1 (60S acidic ribosomal protein P0 [Cucumis sativus] >KGN65800.1 hypothetical protein Csa_023177 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 7.7e-153
Identity = 298/325 (91.69%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAV NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVF P VLDL+EEDLLEKFLAGVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLSEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP   AE     S AAAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAVAAE-----SVAAAP 300

Query: 301 AAKEEKKEESDEES-EGDMIMGLFD 325
           AA EEKKEE +EES EGDMIMGLFD
Sbjct: 301 AAVEEKKEEPEEESDEGDMIMGLFD 320

[Close]

BLAST of HG10021843 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.0e-135
Identity = 253/324 (78.09%), Postives = 284/324 (87.65%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M  K T+A+KK  YD KLC L+EEY Q+L+V +DNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KG+KVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL+VLSVYDNGSVF PEVLDLTE+DL+ KF AGVSMV S+SLA+S+PTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHM +NAYKN LAVAV T+YSFP+AD++KE+LKDPSKFA AA     A SG    A AA 
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASG----APAAA 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
           A +EEKKEE  EES+ DM   LFD
Sbjct: 301 AKEEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of HG10021843 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-132
Identity = 249/323 (77.09%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA++NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAP 241
           GIRPFSYGL+V SVYDNGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+     A++G  A A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEESDEESEGDMIMGLFD 325
           AK E+KEESDEE  G    GLFD
Sbjct: 301 AKVEEKEESDEEDYGG-DFGLFD 318

[Close]

BLAST of HG10021843 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.6e-132
Identity = 250/324 (77.16%), Postives = 288/324 (88.89%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA++NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAP 241
           GIRPFSYGL+V SVYDNGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA    A++G  ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEESDEES-EGDMIMGLFD 325
             EEKKEESDEE  EG    GLFD
Sbjct: 301 KVEEKKEESDEEDYEGG--FGLFD 321

[Close]

BLAST of HG10021843 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 469.2 bits (1206), Expect = 3.9e-131
Identity = 241/324 (74.38%), Postives = 286/324 (88.27%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD+KLC+LL+EY++VLI  ADNVGSNQLQ IRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           +++R I++H++ TGN   + L+P LVGNVGLIFTKGDLKEV+EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSE+ALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL++ +VYD+GSVF PEVLDLTE+DL+EKF +GVSMVAS+SLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHM +N YKN LAVAV TEYS+P AD+IKE+LKDPSKFA AA   A     D+ +AA + 
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAA-----DSGAAAPSA 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
           A +EEKKEE +EES+GD+ M LFD
Sbjct: 301 AKEEEKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of HG10021843 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.5e-130
Identity = 245/323 (75.85%), Postives = 280/323 (86.69%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL+V SVYDNGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESG A  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEESDEESEGDMIMGLF 324
                 +EE+ EES+GDM   LF
Sbjct: 301 ------EEEAAEESDGDMGFDLF 316

[Close]

BLAST of HG10021843 vs. ExPASy TrEMBL
Match: A0A6J1DCV2 (60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 298/324 (91.98%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSIVLMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTAVM+L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL+VLSVYDNGSVF PEVLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLAAA
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALAVAVATEYSFPQA+E+KEFLKDPSKFAA AAP A AESG AA AAAAP
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
           AAKEE KEE  EES+ DMIMGLFD
Sbjct: 301 AAKEE-KEEPAEESDEDMIMGLFD 323

[Close]

BLAST of HG10021843 vs. ExPASy TrEMBL
Match: A0A6J1HJ11 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111464893 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.9e-154
Identity = 298/324 (91.98%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MV+KPTRAQKKT YD+KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVVKPTRAQKKTQYDKKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+AVMNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP A  ESG  ASAAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESG-GASAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
            A+EEK  E +EES+GDMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of HG10021843 vs. ExPASy TrEMBL
Match: A0A6J1I3W8 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111469430 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.2e-153
Identity = 298/324 (91.98%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT YD KLCRLLEEYS VLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTQYDNKLCRLLEEYSHVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGN+AVMNLLP LVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGL+A
Sbjct: 61  MMKRSIRIHSEKTGNSAVMNLLPQLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLIA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVFDPEVLDLTEEDLLEKFL+GVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFDPEVLDLTEEDLLEKFLSGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKN LAVAVATEYSFPQADE+KEFLKDPSKFAAAAAP A  ESG  A AAAAP
Sbjct: 241 PHMLINAYKNLLAVAVATEYSFPQADEVKEFLKDPSKFAAAAAPAAGDESG-GAPAAAAP 300

Query: 301 AAKEEKKEESDEESEGDMIMGLFD 325
            A+EEK  E +EES+GDMIMGLFD
Sbjct: 301 -AEEEKAAEPEEESDGDMIMGLFD 322

[Close]

BLAST of HG10021843 vs. ExPASy TrEMBL
Match: A0A0A0LV50 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_1G530120 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.7e-153
Identity = 298/325 (91.69%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAV NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVF P VLDL+EEDLLEKFLAGVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLSEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP   AE     S AAAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAVAAE-----SVAAAP 300

Query: 301 AAKEEKKEESDEES-EGDMIMGLFD 325
           AA EEKKEE +EES EGDMIMGLFD
Sbjct: 301 AAVEEKKEEPEEESDEGDMIMGLFD 320

[Close]

BLAST of HG10021843 vs. ExPASy TrEMBL
Match: A0A1S3C6N6 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 297/325 (91.38%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTAV NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVYDNGSVF P VLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP A A+     S  AAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAK-----SVVAAP 300

Query: 301 AAKEEKKEESDEES-EGDMIMGLFD 325
           AA E+KKEE +EES E DMIMGLFD
Sbjct: 301 AAMEDKKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of HG10021843 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 474.2 bits (1219), Expect = 8.6e-134
Identity = 249/323 (77.09%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA++NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAP 241
           GIRPFSYGL+V SVYDNGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+     A++G  A A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEESDEESEGDMIMGLFD 325
           AK E+KEESDEE  G    GLFD
Sbjct: 301 AKVEEKEESDEEDYGG-DFGLFD 318

[Close]

BLAST of HG10021843 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 472.2 bits (1214), Expect = 3.3e-133
Identity = 250/324 (77.16%), Postives = 288/324 (88.89%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA++NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAP 241
           GIRPFSYGL+V SVYDNGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA    A++G  ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEESDEES-EGDMIMGLFD 325
             EEKKEESDEE  EG    GLFD
Sbjct: 301 KVEEKKEESDEEDYEGG--FGLFD 321

[Close]

BLAST of HG10021843 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-131
Identity = 245/323 (75.85%), Postives = 280/323 (86.69%), Query Frame = 0


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAA 240
           LGIRPFSYGL+V SVYDNGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESG A  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEESDEESEGDMIMGLF 324
                 +EE+ EES+GDM   LF
Sbjct: 301 ------EEEAAEESDGDMGFDLF 316

[Close]

BLAST of HG10021843 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 401.4 bits (1030), Expect = 7.1e-112
Identity = 220/323 (68.11%), Postives = 255/323 (78.95%), Query Frame = 0


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+                               
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILV------------------------------- 60

Query: 62  MKRSIRIHSEKTGNTAVMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
             RS+RIHSE TGNTA++NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  --RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAAAP 241
           GIRPFSYGL+V SVYDNGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPGAVAESGDAASAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+     A++G  A A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 285

Query: 302 AKEEKKEESDEESEGDMIMGLFD 325
           AK E+KEESDEE  G    GLFD
Sbjct: 301 AKVEEKEESDEEDYGG-DFGLFD 285

[Close]

BLAST of HG10021843 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.6e-08
Identity = 46/205 (22.44%), Postives = 95/205 (46.34%), Query Frame = 0


Query: 22  LEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRSIRIHSEKTGNTAVMNL 81
           +E+YS V +   +N+ + + +  R+  R +    +G N +M+ ++   +E    + +  +
Sbjct: 34  VEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGSNKVMQVALGRSAEDELRSGIYKV 93

Query: 82  LPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 141
              L G+ GL+ T    +EV+     Y+    +R G +A   V +  G            
Sbjct: 94  SKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRTGSIAVETVELKEGPLEQFTHEMEPL 153

Query: 142 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLSKLGIRPFSYGLIVLSVYDNGS 201
            + L +P ++NKGTVE++    + ++G+++    A +L  L ++  ++ L +L  +    
Sbjct: 154 LRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHILRLLRMKMATFKLNLLCRW---- 213

Query: 202 VFDPEVLDLTEEDLLEKFLAGVSMV 226
              P   +L  EDL E +   +S V
Sbjct: 214 --SPSDFELYREDLSELYREDLSDV 232

The following BLAST results are available for this feature:

BLAST of HG10021843 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895318.1	2.7e-158	94.44	60S acidic ribosomal protein P0-like [Benincasa hispida]	[more]
XP_022150896.1	3.1e-154	91.98	60S acidic ribosomal protein P0-like [Momordica charantia]	[more]
XP_022964942.1	2.0e-153	91.98	60S acidic ribosomal protein P0-like [Cucurbita moschata] >XP_023520060.1 60S ac...	[more]
XP_022970458.1	4.5e-153	91.98	60S acidic ribosomal protein P0-like [Cucurbita maxima]	[more]
XP_004145258.1	7.7e-153	91.69	60S acidic ribosomal protein P0 [Cucumis sativus] >KGN65800.1 hypothetical prote...	[more]

BLAST of HG10021843 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	2.0e-135	78.09	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q42112	1.2e-132	77.09	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]
P57691	4.6e-132	77.16	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
P41095	3.9e-131	74.38	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
O04204	2.5e-130	75.85	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]

BLAST of HG10021843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCV2	1.5e-154	91.98	60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 P...	[more]
A0A6J1HJ11	9.9e-154	91.98	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111464893 PE...	[more]
A0A6J1I3W8	2.2e-153	91.98	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111469430 PE=3...	[more]
A0A0A0LV50	3.7e-153	91.69	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_1G530120 PE=3 ...	[more]
A0A1S3C6N6	1.4e-152	91.38	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=...	[more]

BLAST of HG10021843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09200.1	8.6e-134	77.09	Ribosomal protein L10 family protein	[more]
AT3G11250.1	3.3e-133	77.16	Ribosomal protein L10 family protein	[more]
AT2G40010.1	1.8e-131	75.85	Ribosomal protein L10 family protein	[more]
AT3G09200.2	7.1e-112	68.11	Ribosomal protein L10 family protein	[more]
AT1G25260.1	5.6e-08	22.44	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 9..108 e-value: 2.1E-19 score: 69.5
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 2..324 e-value: 1.1E-134 score: 446.3
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 8.8E-21 score: 73.7
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 3.1E-47 score: 161.8
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 9..134
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.8E-33 score: 116.1
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 235..323 e-value: 1.0E-16 score: 61.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..324
None	No IPR available	PANTHER	PTHR45699:SF13	60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE	coord: 1..324
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..324
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 3.23035E-88 score: 260.198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021843.1	HG10021843.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome