HG10014737.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCTGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTTCCCTTCAATTGCTCCACCCCGTCGCAGCGCCGCGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGTCGTGGACCGGGACCGATTCTTTTCCCATCAGGGTGAAGATTTCCGCCGCAGTGTCTTCGGTCATACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGCAAAGGATCGGATGAGGAAGATGATGATGACGACGATGATGATGAAGATGAAGTCGATGATGGCGATGATGATGTTGAGGGGCTTGTTTCGTTGGATAATGTCAATAAGTGCACTAAAACTTCTAACCCCGACGATAGCAACAATGATAGAAGCGATCAGAGTAGTGGGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTAAGAAGTCTTTACTTTGAACTTTCATTGCCCAAATAGAAACTATGATTCTAGAATGCTTGTTTGGATATTCTGCTCCCAATTTGGATTTTTTTCTTTTTGTTAATTTTTCTTATGGGTTTTAGGTGGGACTCTGTTAGTCAAGGATGGTTTGGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCACAGGGGAGGTTGGGGAACTACCCAAATGCGGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCATAGCACTGAAGGGTCTGCTTCTGGGCAGAAGGATCTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTGCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGTAAGTTTTTAGTGTTTCCATTATGTTTCATTATATTTGGTTGAGCCTGTCAATTATCTGGAAGTGTGGACTTTGTGGTTTAGTGTGCTTTCAGGAAGGAAATATCATATGTTCTTCCATTTTTTTGCATATTTCAGTTTACATTCTGATGTAATAGGATTAGGGTAAATTTGGCTATCTTGGTCAAATCCTTTAATTGATTAGGATTATGATTAGGATTAGTTTCCTTAGTTTATTAGGATTAGATTAGTTTCTCAGGTTAATTAGGATTTGGATTAGGATTAGTTTGCTTTATTCTAATTCTCCATAAATAAAGAAATTGTCTTCTTGTATGGACAACTTTTAATTGATAATAAAGACTTTGATTTGATTTTTGGAGAAAGTTCTCATTTTATCTTTTAGGCTACAACACAATCTGTGGTAAAAATTCTTACTTCTTGACTTATTTTTCCATCTCAATTGTTTCTGGTTATATATTTGCTTAGGTTTGTTTTTCTTCTTGAAATCAGGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAGTGAGTTACTGGCAAGAATACTGCTCATCTATACTGTTAAATTCTTTTTTGTCATGTTATCTATCATTTTTCTGATTGTGTTCAAACGTAAGCGGTGCATTGAAATTCTTCTGTGTCTAGTATCCTAATGCTTTGTATGGATTGCATTGCAAGCATTGAAACTTCAAAACATTTTAAAGTTAGCATTTGATTTGAAGTTTTAATGGCCCTTTGTAGCAACTCATGCTGATTCACTTGCAGAATTTCATCAAGTTGTCTAGTACAGTACTTGCAAAAAGAGTCCAACTGAGCCTTAGAAATATACCGAACACTTGGTTGAGGTTCTTCTATACAAAATCCATTTTAATTACTAGCTATTACAATTATTATTGCCTTTTTTAAGAATACTAGCTATTACTATCAAATATCAATCAAGTAGTTTTTGCATTCTTGACCATAAGAGCCCCTTTTCGAGCCATTCGTTTCAGTGAGGTTTATGAAGATAAGAGTTTGCAAGAATTTTAAAATAAGAGACGATACCAGTTTTGGTTTAAAAATGAGTCTGCTACCCTTATGCAGCAGCAGAGCTTGAACTCTTAATATTTCAACATGAAAATGGTTGGCATCTACATGGTTTAAAGTTTTCAATAATTGAACTCCAGTTTCCACCACTGAACTTATGAACTTGTAATTTTCAGTGTCATGATGTAAAACTTGGCGCCCTGTCTCTTAGCTGGGTGAAATCAAGTAATTTGACTAGTTAACCAGATTTTAGTCTTAGTGAGTTTGACATGCATTTTCTTAATTTTTTATCATGAATGCTCAATTTCTGTTGCAAGCATTTATTTTACCCAACTTGAGCACCATAATTTGCATTGATGTGTGGCTGCTCTGTTAGTTTGATATTAATCAGTCAATGATTTTGATGACCTCGGTTTCATAGAGTTTCTGCATTTCTCATGACGTCTTTCCAGAAATCTTGTTACTCGTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATGTGAGTAGAATTTTTTCTCCCCTTTTAATATTTAACATCTCTTTGTTACTGTTTCCATAAATGCTCAATGTGTACTGAGGTTTAATTGTTCTCGTGTTATGTTGTAACTGCTCCTCGAAGTGAGACAAAACATGTAAAAATTTTCTTTGTTGTTAGTCGCCCTTATCTGCTTACCCTAGTCTCACATTGTTGAGAGTTCCCAAACTTATTCAAACCTCCAGAATAATGAAGCACAGATTGATATAGTTCTCTTTGAAGATTATTTTTGAAACTGTATGAACTTTTCATGATCCTCTTTTTCATGTCATGATATTTTTATCTTCAGCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTATTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTATTTGCTTTGTACCTCGGACCACCGTATCTTAACCCTGTTAATGTGAGATATAGAATCAAAGGGGGAGGATGGGAATAGACTTCAGGAGACTTTGGTTTTCCCTATCTTTCAAAGTTTTTCCTATCCCTCAACTGCTATATTCTGTTCACACGTGTCAAGTTCTACTCGTGCATTTATTTTCGTCACTCTTTCGCTTCAGAGTGAACAGTATTCTCATAGTAGAACTGCTTCCGAGTTTTCGATAATCTGTCCGGTGTTTGCCAATGTAGGACAAGGGTGGTTATGGCGATTTGACTCTCATGGATACTCCAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCAGTGACCGATAGGGTAATTATCAAGGTGAGCAAAAAACTGTACTCTTATTTAGTTCCTTATATTATAGCATGTTGAAACTAATGTCGCAGCTAAAATGGATCAGGGGAACAAGAGGACACCGCAACGATTCGTGGGACGTGAGGCTGTCGTTACAACACAGTGCTTGAATGGATGGTTTGTCATTTTTTGTTCTGATTCTCAATAATTTTTCTTCTTTCTGTCCATTACAAGAAGGAAGTAGCATGTTGTTTCCCATTAATCTTTTGTGTTTAATTCTAATTATCGTTTTTGCCTATAGAAAGTGTTGGAAGCCATGTAAAATTAATGATAAAAGACTAAAATAGTCTTATATGCTAAGTTTAGAATTATGGCATAGCATTTGAATCTTAAGAACTTAAACTTAAACATAACATTTGAAGGTTAAGAACCAAAACTAAAAATGTAAAACATAACCATAACTATATAAGAAAGTTTAATCCCCATTTGATTTTTGAAAATTAAGATCATAAACATGTTTATAGAATTTTTTTATTTTTAGGGGTGTTTTTAAAATTCCAGCAAAATTTTGAAAACTAAAAGAAAAAATTTGAGGGTCATAGTTTAGTGGATAACGCATCATTTACCATCCTCCCAAAGGTCGATGGTTCAAATCTCTCATCTCTACAATTTTGAACAAAAAAAAGTTTTTATTTTTGAAATTTGGTTATGAATTCAAATGTTTTCTTTAAGGAAAGATGAAAATCATTGTAAAGATTTTACTTGATCTAATACAATCTTGTTTACAACAATGCATCCACTTTTCTTACACGGCAGGTATGTGGTGAAAACATTAGACAACGCAGAGAGTGTAAAGTTGCAATACCGTTCACTTGCGAAGGTTCCAAATGATGCAACATCAAAGATGATAACAAGGAAGATCACGCCTAATTGGCTTTAG ATGTCCTCTGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTTCCCTTCAATTGCTCCACCCCGTCGCAGCGCCGCGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGTCGTGGACCGGGACCGATTCTTTTCCCATCAGGGTGAAGATTTCCGCCGCAGTGTCTTCGGTCATACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGCAAAGGATCGGATGAGGAAGATGATGATGACGACGATGATGATGAAGATGAAGTCGATGATGGCGATGATGATGTTGAGGGGCTTGTTTCGTTGGATAATGTCAATAAGTGCACTAAAACTTCTAACCCCGACGATAGCAACAATGATAGAAGCGATCAGAGTAGTGGGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTGGGACTCTGTTAGTCAAGGATGGTTTGGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCACAGGGGAGGTTGGGGAACTACCCAAATGCGGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCATAGCACTGAAGGGTCTGCTTCTGGGCAGAAGGATCTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTGCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCGTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTATTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTATTTGCTTTGTACCTCGGACCACCGTATCTTAACCCTGTTAATGACAAGGGTGGTTATGGCGATTTGACTCTCATGGATACTCCAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCAGTGACCGATAGGGTAATTATCAAGGGGAACAAGAGGACACCGCAACGATTCGTGGGACGTGAGGCTGTCGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACATTAGACAACGCAGAGAGTGTAAAGTTGCAATACCGTTCACTTGCGAAGGTTCCAAATGATGCAACATCAAAGATGATAACAAGGAAGATCACGCCTAATTGGCTTTAG ATGTCCTCTGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTTCCCTTCAATTGCTCCACCCCGTCGCAGCGCCGCGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGTCGTGGACCGGGACCGATTCTTTTCCCATCAGGGTGAAGATTTCCGCCGCAGTGTCTTCGGTCATACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGCAAAGGATCGGATGAGGAAGATGATGATGACGACGATGATGATGAAGATGAAGTCGATGATGGCGATGATGATGTTGAGGGGCTTGTTTCGTTGGATAATGTCAATAAGTGCACTAAAACTTCTAACCCCGACGATAGCAACAATGATAGAAGCGATCAGAGTAGTGGGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTGGGACTCTGTTAGTCAAGGATGGTTTGGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCACAGGGGAGGTTGGGGAACTACCCAAATGCGGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCATAGCACTGAAGGGTCTGCTTCTGGGCAGAAGGATCTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTGCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCGTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTATTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTATTTGCTTTGTACCTCGGACCACCGTATCTTAACCCTGTTAATGACAAGGGTGGTTATGGCGATTTGACTCTCATGGATACTCCAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCAGTGACCGATAGGGTAATTATCAAGGGGAACAAGAGGACACCGCAACGATTCGTGGGACGTGAGGCTGTCGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACATTAGACAACGCAGAGAGTGTAAAGTTGCAATACCGTTCACTTGCGAAGGTTCCAAATGATGCAACATCAAAGATGATAACAAGGAAGATCACGCCTAATTGGCTTTAG MSSEDINGLNSQLVFQDEALPFNCSTPSQRRVPDPGPKTRELCGFMDDKLFPVVDRDRFFSHQGEDFRRSVFGHTRNWNGNGTARTGSGKGSDEEDDDDDDDDEDEVDDGDDDVEGLVSLDNVNKCTKTSNPDDSNNDRSDQSSGGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGSSGNNTGATQSENHPQGRLGNYPNAVTIAEPESDAYYSQYLHSTEGSASGQKDLGMENGCGFGRRDVSFAGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQVFALYLGPPYLNPVNDKGGYGDLTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATSKMITRKITPNWL Homology
BLAST of HG10014737.1 vs. NCBI nr
Match: XP_038892965.1 (U-box domain-containing protein 62-like [Benincasa hispida]) HSP 1 Score: 769.2 bits (1985), Expect = 1.9e-218 Identity = 403/450 (89.56%), Postives = 412/450 (91.56%), Query Frame = 0
BLAST of HG10014737.1 vs. NCBI nr
Match: XP_004147826.3 (U-box domain-containing protein 62 isoform X1 [Cucumis sativus]) HSP 1 Score: 741.5 bits (1913), Expect = 4.3e-210 Identity = 386/450 (85.78%), Postives = 409/450 (90.89%), Query Frame = 0
BLAST of HG10014737.1 vs. NCBI nr
Match: XP_022146864.1 (U-box domain-containing protein 62 isoform X1 [Momordica charantia]) HSP 1 Score: 740.3 bits (1910), Expect = 9.6e-210 Identity = 384/452 (84.96%), Postives = 405/452 (89.60%), Query Frame = 0
BLAST of HG10014737.1 vs. NCBI nr
Match: XP_008454674.1 (PREDICTED: U-box domain-containing protein 62-like [Cucumis melo] >KAA0056719.1 U-box domain-containing protein 62-like [Cucumis melo var. makuwa] >TYK21183.1 U-box domain-containing protein 62-like [Cucumis melo var. makuwa]) HSP 1 Score: 738.8 bits (1906), Expect = 2.8e-209 Identity = 387/450 (86.00%), Postives = 407/450 (90.44%), Query Frame = 0
BLAST of HG10014737.1 vs. NCBI nr
Match: XP_008456955.1 (PREDICTED: U-box domain-containing protein 62-like isoform X1 [Cucumis melo] >KAA0066993.1 U-box domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa] >TYJ96802.1 U-box domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 737.3 bits (1902), Expect = 8.1e-209 Identity = 386/450 (85.78%), Postives = 404/450 (89.78%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy Swiss-Prot
Match: Q6DBN5 (U-box domain-containing protein 62 OS=Arabidopsis thaliana OX=3702 GN=PUB62 PE=2 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 3.9e-65 Identity = 137/254 (53.94%), Postives = 168/254 (66.14%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy Swiss-Prot
Match: Q58FY4 (U-box domain-containing protein 63 OS=Arabidopsis thaliana OX=3702 GN=PUB63 PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.5e-52 Identity = 103/200 (51.50%), Postives = 144/200 (72.00%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy TrEMBL
Match: A0A6J1CZA9 (U-box domain-containing protein 62 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015962 PE=4 SV=1) HSP 1 Score: 740.3 bits (1910), Expect = 4.6e-210 Identity = 384/452 (84.96%), Postives = 405/452 (89.60%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy TrEMBL
Match: A0A5A7UT74 (U-box domain-containing protein 62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00030 PE=4 SV=1) HSP 1 Score: 738.8 bits (1906), Expect = 1.3e-209 Identity = 387/450 (86.00%), Postives = 407/450 (90.44%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy TrEMBL
Match: A0A1S3BYQ9 (U-box domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103495030 PE=4 SV=1) HSP 1 Score: 738.8 bits (1906), Expect = 1.3e-209 Identity = 387/450 (86.00%), Postives = 407/450 (90.44%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy TrEMBL
Match: A0A5D3BAD9 (U-box domain-containing protein 62-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00200 PE=4 SV=1) HSP 1 Score: 737.3 bits (1902), Expect = 3.9e-209 Identity = 386/450 (85.78%), Postives = 404/450 (89.78%), Query Frame = 0
BLAST of HG10014737.1 vs. ExPASy TrEMBL
Match: A0A0A0LIQ7 (U-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852550 PE=4 SV=1) HSP 1 Score: 737.3 bits (1902), Expect = 3.9e-209 Identity = 384/450 (85.33%), Postives = 408/450 (90.67%), Query Frame = 0
BLAST of HG10014737.1 vs. TAIR 10
Match: AT5G05230.1 (RING/U-box superfamily protein ) HSP 1 Score: 250.4 bits (638), Expect = 2.8e-66 Identity = 137/254 (53.94%), Postives = 168/254 (66.14%), Query Frame = 0
BLAST of HG10014737.1 vs. TAIR 10
Match: AT2G40640.1 (RING/U-box superfamily protein ) HSP 1 Score: 206.1 bits (523), Expect = 6.0e-53 Identity = 103/200 (51.50%), Postives = 144/200 (72.00%), Query Frame = 0
BLAST of HG10014737.1 vs. TAIR 10
Match: AT2G40640.2 (RING/U-box superfamily protein ) HSP 1 Score: 161.4 bits (407), Expect = 1.7e-39 Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 0
BLAST of HG10014737.1 vs. TAIR 10
Match: AT3G19895.1 (RING/U-box superfamily protein ) HSP 1 Score: 152.5 bits (384), Expect = 7.9e-37 Identity = 73/183 (39.89%), Postives = 120/183 (65.57%), Query Frame = 0
BLAST of HG10014737.1 vs. TAIR 10
Match: AT2G40640.3 (RING/U-box superfamily protein ) HSP 1 Score: 102.4 bits (254), Expect = 9.4e-22 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|