HG10011927 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011927
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like isoform X1
Location	Chr01: 15477516 .. 15488146 (-)
RNA-Seq Expression	HG10011927
Synteny	HG10011927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGTCTCATTTATTCTTTCAATTTGATTACTCTCACGCTTCCTCGAATTTCTATTTGAACCTTATTCAGAAGGTATCATATTGAGTGCTTCATTACGTTTTTGCCGGAGTCGTTCAGTAATACTTTGAATTTGCTAATGGTTCTTTATGTACCCGTGTGGACCATAATGAAACTAAGTTACGGAGCATGAAAAGAAAATGAAACTGAAGATATACGTATGGATTGCGACATTCATACGTCTTAATTCATGCATAGATTTCGTGCGTTGTTGCGTAATTGTCTTTCTGCTTGCATACATCCATAATTTTGTTGTGCTGTAGTTGTCTACTATTATAGTAAGTTCAAGTCTGTATCTGCTGCCCTTATACAACAATTTAATTTGCATCAGACACTTACGTGAGTTGGGAAGATGTCTGGAACTTATTAACATTTTATTTTTCTTCCTAATTGTTTATATTTTTGTTTTGTTTTGTTTTGTTTTTCTCATCTATTCAATGTCCAAAGTTGACATATATTGCATTTTTTTCTCTGATTTACTTCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGTAGATTTGAGTGCATTTCGCTCGTGTGCATTATAGTGGTTAGCCTCATTCTCCCTTTCATTTTTCTTTCTTAATGGTAAACCTAGAGGCAAACTTTTGCCTTGAGAGGCATTCGGCTGTATAACTTTAAGCGAAGCAAAGAAGTTGTCAACCACTTCCACATAATGCACTGTCCCGGAGAGAGAGTTATCATGAGTATTGATACCCTCAAACAAGGAAGGAATTGCTAGATAGAATTCCTGTAACATCAAGCTCATCTCTGCAATCTTTTTAATTATCTTCCTTTTTGAAAGTTTTGAATTTTCAAATATTTTTTATTTTTTAAAATTATGCACTAAAAAATAATGGGAGAAATGCCTCAAACTTATTGCACCATGATTTGTTTCATCACCTACCCATCAGAGTTTTATTTTATGCAACTGGAGGAAAAAGATTCATGAATGATGTTATGCCATTTCAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGTAAGAAGTATAGTTCTTGCAAACCTTGTTTACTTTCTCTTTGTCTCCTTTGATATCTGAAGGAAAGAAAAGCGTATAGATTTTAAGAAAGGCCGTATTTCATTGAGTCTACCACTACTCCACTGGTCGTTGGGATAATGTATACTGCTTTAATGTTAAATGTAGATTTGTGTATAGTATGGTTGCATTTGGAAGAAAATATTAGTCATTTTGACGCTTCAATGAAAACAATGTAACGTAATAATGCTTTCTGGTTTTTAGGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATGTATGAGCTAACAAACTTTATATTGCTTGAGTGATTCTTTAACAATTCGCATAGTGTTTGAGAGTTTCTTCAATTAAATTGAAATTCTAAGTTTCTCCAAGGGTGAAGAGTTCTATTGATCCAGAGTTATCTGCAGGTTTGATAAAATCTTTGCGGGCAGTTAATGATACCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCATTGCGACTTATTCAAAGGGTAGGATCATATAGCATCTTGATAAATGAATTATGTTTTGCTGTTCATTTCCTATTTATGTTCATATATTAATTTGTCTGAAATGATTTCACTCTCAATTTACTTAATTAGCAGGTCCACTGCCTTGAATGAGAGAACTTAACTGATTTCTGTTCTTTGATAATTGTGTGGTTGCTTTGTGTTGGCTAGTAAAGGTTATGCTATTTCACCTTTTCCTCCTATTTTTTTTCCTTCTCTTTTTTCTTCCTCCAAATGAAATCCGAGACTGGGGGAGATGGATAAAAATGGACAATTGAAGTTCAATCTTTTAAAAAGTTTGATGTACGTGGCAGTTTACTCCGTTTGTGATAAACAACTTAAAATACGGTCTCTTTTTGTTGAATTTGGAGAAACATACCTTGCAAGAATATTAAACGTTTTTCCCTCTTATACTTCTTTACTATTATTTGAGTATTTATTTATTATTTTAGGTAACAAAAAACCCATGTTTAATCTGCCACCATCTAGGAGGTATTTAACTCATTCCCACCTGCATATATTTGGTAATTCAAAATTTCCATTTCAGGAAAGGGATCCGAGTGAGGGTCCTGTACCTCGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTGTAAGTACTTATTCTTGTTTGAGAATTTAACATTGGTTGTGTGGATCCTATTAAACAGTAGCCTCTGAAAGATTTAAATTGATGAAATATTTTGATTCTCTTCAAACTGATAAACATAGTCAAATGAGCTATTCTGTATAGAAGAAAAGTTCTATCTCCTCTGCGGGAAAAAATGGGTGGTGAGGTGGAGGATTATTGTGAGGAAGTATGGACCTCAAGTGGTAGGTGCAAGGGTGTTTCTTACAAGAGCCCTTGGTCTACTATTGCTTTGGGATATCCTCTCTGGGAACAAAACCTTTGTGTTCCTTGTTCCCTCATCTTTACCACCGGTAGGAGAAGAGGTTACAAATGGTGGCCTTGGACGTGCCTTCCCTTGAAAGTTTTTTCTTCCCTATCTCTATGTTTTTGTTGTGCGCTTTCTCATTGTGAGGCTTGTGAGGTTGTCAGTCTACTCTCTATCATCTTTAACCAAGTTACGCGTTTAGGGAGAAAGGATTCTAGGAAGAGGCTTCCATCCAAAGCCCTTTGAGGGCTTTTCCAGTATTTTTTTTGTTTTGTTTTTTTCTGGATTTTTTGTGCCTCTTTTCCCTTTCCGAGGCCCCTTCGTTTTCCTCTCTTTGGAAAGTTAAAATTTATAAGAAAGTGAATTTTTCTGCTTGACAAGTTTTCATGGAGAGTGAATACTCAAGATCATATCCAGGGGCTTTCTTCCATGGTGTTGCATACTCAATAGTGTGTCCTGTAGGAAAGAGGAAGAGGATCTTGATCATTTACTTTGGAATTGTGTGTTTGTTACCTCCCTGTGAAAACAAGCTCTTTAGGATCTTTGAGATCGTGCTTGCTCGAAATAGAGGTTGTGATGTTTGTGGAGGTGCTCTTGAATCCTCCTTTTTGCAACACAGGAAAGGTTCTTTGGCAGTCTTAGTTTTTTGCTTTGTTATGGGGCATTTGGCTTGAGAGGAATAGTAGAATTTTTCATGGGTCGAGCAGTCTGGGAGGAACTTTGGGATGTGACTAGGTTTAACTCATTCTTGTAGGTGTCTTTTAATAGCCCTTTTTTTTTGTAATTATCAGCTTAGTTTTTTATTCTTTTGGATTGGAGCCCCTTTCTATATTTGATCATGAGGGGGCTTTTGTTTTTGGGGCTTGTTTTTTTGTATTGCCCTTGTATATTCTTTTTATCTTTCTCAATGAAAATTTAGTTTCTTTAAAAAAAAAAAAATAGACGTTCAATGTTTCAAGAATTCAAAACTATTATCAATGGCATTCTGCTTGAACACTTTATCTTCAATGAGTAGAACATTATTAAATATATACTCAAAACTATTTTATTCCGTCGTTTGAACTTTTGGTCCACTATAAACAATTTTTCTTTTATAAACAAATTGATCGTATCCTCAAAAGTATTTTATTCAATGGAAAAATTATTCTCGATATGACATAGGATTTTGGCGTGCAAATCTTCATATTATAGTGGTCTTTGTCATCCTTTACATGCATCTTAAATTTTAATTTTCACTCGTTCTTTTGATCCTAGAAGGATCCCTCTCTCACATATCGTTGCGTACATATGCATTCGAAATGTGTCATTTGTGTGGCTAATTTGTTGTTTTTTCTTATTGTAGCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTATGCTCCCAGAGATATCTGTTTGTATCATGTGAGGCCATATTGAGGGAAGATGATTGGTTAAAGGGCCAAGTTTCCTAGGTTCTGTATATTAATTTTATTTCTCAAAAATGTGAGTACAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGGTAAACAGTTGGGAAATAGCAACCGAATACTAACTAAACAAAAGAAACAACTCAGCCAAGACCAAAGAAAATACAAGAACGGGCAAGAAAGGACAAGATTGGCTTACAAAAGCAAGAAAAGGCCAAGAACAATACAAATGGCCAACAGTGAGGTGTGTGGGAGGCAAAGAGTGTCACCTTTAAATAGTAAGCCATAAAAAATATGGAAGTCAGGGCATGGTAGGTGGTTAGTGCATTTATATCAAATGTCTTTGAAATCATCATCCAACTCATACAATTCAGGGAGAGAATTATAAGCAAATATTTCGCCCTCCGGAAGAGAGGAGGTTACCTTTGCGGCTTAAAGAGTCAGCTGCTGTATTTGTTTTTCCTGAGGTATGTTTAATAACAAAATCAAACCGTCGTAGAAATTGAAGCCACCTAGGATGCATTCTACTAATGTTTTTTTGAGATTGCAGAAATTTCAAAGAAAAGTGGTCAGTAAGCAATACAAGTTCTTTGTCAAGAAGATAACGTTCCCAAGTTTTTAGAGCCCTAACCAAAAAATAAAATTATTGTAGATAAGTGGGCCAAAGTTTTCTGGGAGGGCTGAGTTTTTCACTAAAAATTTCAATGGGTTGACCTTCTTGACATAAAACAGCCCCAGTACCCACACCCGAAGCATCAACCATATCTTCAAAAGGTTTTGGGAAATCATCGGGTAAGGCTAAAACAGGGATGGGAAACAAAAGGGTTTTTAAAGTATTAAAATTGTCATGTGTAGAATTATCCCAAAAAAATTACTCTTTTTTAAATGATTTGTTGTTGTTGTTCCTTTTCAATTCTCTATAAATAGAGGGATTGTCTTCTTGTTTTGATAACTTTTGATTAGTAATAAAGACTTTGATTTATTATGGGAGATTTCTCTCCTTTTATCTTTTAAGCTACATCAATAAGACTTGCTCTAAATTAAAATATCATCAAAATATACCACAACAAATTTATTAAGAAAAGGAAGTAGAACTTGGTACATAAGCTGCATAAAGGTACTACGAGCGTTGGAAAGACCAAATAGCATGACAAGCCATTCATAAAGCCCTTCAGTAGTTTTAATTTTAAAGGTTGTTTTCCTCACATCTCCGGACTTCATACGGATTTGATGATAACCACCTTTTAAATCAAAATTTTAGAAAAGATAGATGCCCCACCTAATTGGTCCAAAAGAGCACTAAAGTGAGGAATAGAAAACCAATACTTAATGGTTATCTTATTAATTGCTCTACTATCCACACAAAGTTCCAAGATCCATCCTTTTCAGGAGCTAGTAAAGTTGGGACAACACAAGGACTAAGGCTAGGTTGGATATAACCTCGGTGAAGCAATCCTTTAATTTGTTCATGTAATATTTGATATTCTTCAGGGCTCATTCTATAGCCAGGTCATATGATGGATTGGGTGAAAGATACGAAATGGCCAAGGTTTCATCTGGGTCGGGTTGGTCAGCCTTCAGGGTAGGAAAAATTGCAGGACACCCATCTCTTCTTTGCTAGAGCAACTGTAGTTGTAGGGCACGCTTGGAAGTTGAATCTATATGGAAGGAGTTTTTAAAGAGTATTTTCAGAGAGGTATCTTGAATCGTTCTATGGTGGTAACTTTTGTGTGCCTGATTTCAAAGAAGGAGGATGCTAGTAGGGTGAAGGAGTTTAGACCTATTAGTTTTATTACTAGTGTCTATAAGATTCTGGTTAAGGTCCTTGCAAATCGTCTTAGGAAAGTGCTTTTCTCGACTATTCCAGTGGCTTAAGGTGCTTTTGTAGCTGACAAGCAGATTCTTGACCAGGCTCTCATAGCCAATGATGCCATTGAGGATTATAGAGCTAATAAGAAGGAGGGTGTTATCTTCAAACTTGACTTTGAAAAGGCATATGACCACGAAGATTGGGACTTTTTGGATAAGGTGATGGAGAAGAAAGGCTTTGCGTACAAATGGAGAATGTGGATGTGGGGTTGTGTTAGAAATGTGAACTACTTTATTCTTATTAATGGAACCCCTAAGGGATCGATTAAGGCTTCTAGAGGCTTAAGCCAAGGGGAACCTCTATCCCCCTTCTTGTTTCTAATTGTTGTGGATGTCTTAAGTCACCTTATCTATAGGAGGTGGAGGGAAATATCACGGAGCCTTTTAGGGTTGGTTTTGAGGAGGTAGCCTTGTTTCACCTCCAGTTTACTGATGACAATGTTGTTCTGTTCTGGCAATGAGGACTCTTTTTTTATCGTTAACCATATGGTGGGGGTTTTTAAGGACATGTCTAGACTTAAAATTAATAGGCGTAAGTTCTAAATCTTGGGTATTAATTGTGATAAGGATAAGCTTAGAAGGTGGGCCAGTACGATTGGCTGCGAGGTTGGTCCTTTCCTTCCCGTAATCTTGGCCTCCCTTTGGGGGGTAACCTGAGGTCTTTGTCTTTTTGGGTTCCCATTTCTAAGAAGATTCGTAAAAGGCTAGCCTCTTGGAAGAAAGGATATTTTTCCAAGGCTGGTAGACTTACTCTAATCAGATCTGTGTTGAATGGTATTCTCGTTTATTGTTTGTCCCTGTTTAGGGCTCCCAGCTCTGTCTAAAAAAGCCTTGAGAAGTACATGAGAGACTTTTTGTGGGAAAGGGTGGATGAAGGTAAGAGTTCTCATCTGGTTAGGTGGGAGGTTATGGGGCGTCCTGTGAACCAAGGTGGGTTGGAGATTGGTAATTTAAGTCTTCGAAACAAAGTTCTGTTGGCTAGGTGGCTTTGGTGTTTTGCCCATGGCTACTAACTTTTTCAATTGTGTTTTCTCCACTCGAATCATTTCTATCTTCTTCAATTTCATTAACTACATGGGTCTCAACAAGATTTTACCCAAACTTATCTTCTAAATTTTCTATTTGAAAAGTTTTCAACCGTGATTCCTTTGTTTTGTTTTCTTTGGTATACAAAGTCAATCCATTTTTTATGATTCTTTAATTCTTTTCTTTCTTATGAACTTGAATTTTAAAGGGTTTCCCCCTAAATATATGTGGGTTGTTTGGCAACGAACACAACACTCAAAGCTCCCTCTTACTATTGGCGTCGCCAAGAGTTTCCCGGTCTTCCACCAGCGGTAGTCAACATTGGCCCAGACGGTTGCTCTGATACCAAAATTGATGTAGCCTAAGTAGCCTCAAGGAGTAATCTTGAAAGAATCAAGCTTGTGAATCTTTTATTAGAATGATAATGTGTTTCATACAAGATGGGGAAAACTCATATTTATAGAGTTTATTATAAATGGGGGTAAAAAGGGGAATCAACCTAGAATATTACCCAGTTAACCCCATTTTTCCTATATCAATTTTACTCAGTTGTATGAGTACGACAATTAAATTTAACTTTAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGTAAGTGACAGTTGATGCCTATGATTTGTATGTCACTGTATGGAGGTTCAACCCCCACCCCCCTCCTCCATCCCCTCTCATCTTAACATCTGGGATTAATGTAACCCATTTTCTTCAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTAAGAATGTTAACTTGTCTGCCTATGTGACCCTACTGATAAGCTTCTGAATTTGAAGTTATGTTTTTATATAAGATTGTGTGCAAGCTTGTGAGAGGTTTTATATGTGAATTTATGCCCCATTAGTTGGCATTATGAGTCAAGTATGGGAGCTGAATTGTTGCAGAGAAGTTTTGGCAGGATTTGATGCCTGGCTTTTGATAGATGGGATTGAGGCTCATTGACTGAGAAAAAAATGCCTTATAAGAGCATCCAAACAATCATTTGATTGAACTTTTGTTTAATAATGTTTATCCTTTTTCAATGATTCTGAAAATATTTGATTTTTGACACGGAGAAGAACTTGATAGAGATGATTTAACAGACTAATTGAGAAACTCTGGTTTTCATTATGTTGTGAGCTTATTCCTTTTTTTTTCTTTTCTTTTCTTTTTGCTGTTTGAAGCCAGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

mRNA sequence

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

Coding sequence (CDS)

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

Protein sequence

MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTIIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGKFKTFF

Homology

[Close]

BLAST of HG10011927 vs. NCBI nr
Match: XP_038887593.1 (mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hispida])

HSP 1 Score: 1501.1 bits (3885), Expect = 0.0e+00
Identity = 795/983 (80.87%), Postives = 816/983 (83.01%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVSTQPPGQLQ I+GLWDSVLELTKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSTQPPGQLQEISGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLE+LS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLEVLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RH+FSL+SQINGPNYQRIMQTIDDVLHLTQIFG+QTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHIFSLTSQINGPNYQRIMQTIDDVLHLTQIFGVQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSVWLIRPQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLA RNMPLHWAGFAQRL+LLAANSVVLRNTKLITPEVLLHWTSDK++LLS+
Sbjct: 241 NKKTARILCLALRNMPLHWAGFAQRLKLLAANSVVLRNTKLITPEVLLHWTSDKSKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKT QLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTCQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDSSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEEGE+K EDECS SKSRDEKQSSG CRKGLI SLQMLGEYESLL PPQSVIAVANQ
Sbjct: 421 IIEEEEGEVK-EDECSASKSRDEKQSSGMCRKGLITSLQMLGEYESLLIPPQSVIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEY+DCVS++DTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 
Sbjct: 481 AAAKAVMFISGVAVGNEYHDCVSMSDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYA 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                   
Sbjct: 541 NARSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIP D+SGS+SYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 SPPIPTDYSGSESYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
             PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 CSPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGL+P
Sbjct: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLIP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINR GQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRAGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927 vs. NCBI nr
Match: XP_008449381.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform X1 [Cucumis melo])

HSP 1 Score: 1483.4 bits (3839), Expect = 0.0e+00
Identity = 787/983 (80.06%), Postives = 807/983 (82.10%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQI GPNYQRIMQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS+
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           +GKTSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 KGKTSQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEE E K ED+CSPSKSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQ
Sbjct: 421 IIEEEEVEPK-EDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NA S+QVPRSAS+QVVGWSSFMKGS LTPSMVNALVA PAS                   
Sbjct: 541 NALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
            PPIP D+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 LPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSP DRLKARRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927 vs. NCBI nr
Match: XP_022155567.1 (mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia])

HSP 1 Score: 1482.6 bits (3837), Expect = 0.0e+00
Identity = 778/983 (79.15%), Postives = 802/983 (81.59%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLWAVQLSS+L+SAGVSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTA+IVPPLLV+ LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQINGPNYQRIMQTIDDVLHL+QIF LQ C+PG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSF EKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDK+RLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKTSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEE+EGELKEEDECSPSK RDEK+ SGKCRKGLI SLQMLGEYE LLTPPQSV A+ANQ
Sbjct: 421 IIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDCVS+NDTP+NCSGNMRHLIVEACISRNLLDTS YFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSAS QVVGWSSFMKGSSLT SMV+ALVA PAS                   
Sbjct: 541 NARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIA+NGSGDE ISAASILCG SLVRGWNLQEHT LFI+RLL
Sbjct: 661 ----------SLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWNLQEHTVLFIARLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIPAD+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Sbjct: 721 SPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGL 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDR K RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 894

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 894

[Close]

BLAST of HG10011927 vs. NCBI nr
Match: XP_023554812.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGK-TSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGK TSQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNAL A PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927 vs. NCBI nr
Match: XP_022963527.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 1.3e-227
Identity = 440/953 (46.17%), Postives = 589/953 (61.80%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           +WD V+ELTK AQ+   DP LWA QLSS L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           KFLE+AM  ++V PL+V+ LL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           ++M ++ ++L L+++F L T  PGVL+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
           ++ Q  DME+D  + + EK T + E +  +NT  AIE+I +FL+    AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGK-TSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI-FTIIIEEEEGEL-- 376
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +      ++E  G    
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377 ---------------KEEDEC-SPSKSRDEKQSSGKC----------------------R 436
                          +E D    P    D +     C                      R
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVMEKLR 428

Query: 437 KGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINC 496
             L+ SLQ+LG++  LL PP+ V++ AN+AATKA++F+SG  VG   +D +++ D P+NC
Sbjct: 429 DDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVNC 488

Query: 497 SGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSM 556
           SGNMRHLIVEACI+RN+LD SAY WPGYVN R NQ+P+S  ++V  WSSF+KG+ L  +M
Sbjct: 489 SGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAM 548

Query: 557 VNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLH 616
           VN LV+ PAS                                                  
Sbjct: 549 VNTLVSVPAS-------------------------------------------------- 608

Query: 617 IYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETI 676
                                                  SLAE+EK++E+A+ GS DE I
Sbjct: 609 ---------------------------------------SLAELEKLFEVAVKGSDDEKI 668

Query: 677 SAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISS 736
           SAA++LCGASL RGWN+QEHT  +++RLLSPP+PAD+S ++++LI YA  LNV++VGI S
Sbjct: 669 SAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGS 728

Query: 737 VDCVQIFSLHGMVPLLAGQLMPICEAFGS-SPPKSWILTSGEELTCHAVFSLAFTLLLRL 796
           VD +QIFSLHGMVP LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+L
Sbjct: 729 VDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKL 788

Query: 797 WRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLE 856
           WRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + R        S +
Sbjct: 789 WRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQ 848

Query: 857 PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTT 916
           P+F+DSFPKLK WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    
Sbjct: 849 PVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVN 868

Query: 917 SGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG 927
           SG+S+SSG+A+E+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATG
Sbjct: 909 SGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATG 868

[Close]

BLAST of HG10011927 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 8.6e-216
Identity = 455/988 (46.05%), Postives = 557/988 (56.38%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           LW+SV  L +SAQ+KN DPL WA+QL  TL+SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           K LEKA++  IVPPLLV+ LLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           + M +IDD+LHL++ FG+Q  +PG +++   FSIVW+LLDASLD+EGLL L   +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
               PHDM+LD  ++   KR EN +++ K NT  AIE+I +FLQ K T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKT-SQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTI------------ 376
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L   +            
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377 ------------------------------------------------------------ 436
                                                                       
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437 ----IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIA 496
               IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YESLLTPP+SV +
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497 VANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
           VANQAA KA+MFISG+   N  Y+  S++++   C           C  R  L T   F 
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 557 PGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNR 616
              V    N         +  WS  MKGS LTPS+ N+L+  PAS               
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPAS--------------- 609

Query: 617 FGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLK 676
                                                                       
Sbjct: 610 ------------------------------------------------------------ 669

Query: 677 QKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFI 736
                         SLAEIEK+YE+A  GS DE I+ ASILCGASL RGW++QEH  +FI
Sbjct: 670 --------------SLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFI 729

Query: 737 SRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICE 796
             LLSPP PAD SGS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICE
Sbjct: 730 VTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICE 789

Query: 797 AFGSSPPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPE 856
           AFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD  PVG Q +PE
Sbjct: 790 AFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPE 832

Query: 857 YLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASIL 916
           YLLLVRN +L  FGKSPKDR+  RR SK++  S++PIFMDSFP+LK WYRQHQEC+ASIL
Sbjct: 850 YLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASIL 832

Query: 917 SGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDI 927
           S L  G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDI
Sbjct: 910 SELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDI 832

[Close]

BLAST of HG10011927 vs. ExPASy TrEMBL
Match: A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 1483.4 bits (3839), Expect = 0.0e+00
Identity = 787/983 (80.06%), Postives = 807/983 (82.10%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQI GPNYQRIMQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS+
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           +GKTSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 KGKTSQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEE E K ED+CSPSKSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQ
Sbjct: 421 IIEEEEVEPK-EDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NA S+QVPRSAS+QVVGWSSFMKGS LTPSMVNALVA PAS                   
Sbjct: 541 NALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
            PPIP D+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 LPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSP DRLKARRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927 vs. ExPASy TrEMBL
Match: A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)

HSP 1 Score: 1482.6 bits (3837), Expect = 0.0e+00
Identity = 778/983 (79.15%), Postives = 802/983 (81.59%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLWAVQLSS+L+SAGVSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTA+IVPPLLV+ LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQINGPNYQRIMQTIDDVLHL+QIF LQ C+PG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSF EKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDK+RLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKTSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEE+EGELKEEDECSPSK RDEK+ SGKCRKGLI SLQMLGEYE LLTPPQSV A+ANQ
Sbjct: 421 IIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDCVS+NDTP+NCSGNMRHLIVEACISRNLLDTS YFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSAS QVVGWSSFMKGSSLT SMV+ALVA PAS                   
Sbjct: 541 NARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIA+NGSGDE ISAASILCG SLVRGWNLQEHT LFI+RLL
Sbjct: 661 ----------SLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWNLQEHTVLFIARLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIPAD+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Sbjct: 721 SPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGL 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDR K RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 894

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 894

[Close]

BLAST of HG10011927 vs. ExPASy TrEMBL
Match: A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927 vs. ExPASy TrEMBL
Match: A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)

HSP 1 Score: 1466.1 bits (3794), Expect = 0.0e+00
Identity = 774/984 (78.66%), Postives = 803/984 (81.61%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAV LSS+L+SA VSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+L+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPH+MELDVH+SFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTASQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI  LQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITCLQMLGEYESLLTPPQSVIEVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNE YDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNECYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQ+VGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQIVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLN+LLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNILLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWIL SGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILASGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTSGSSNSSGSANEEASIKLKVP+WDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPSWDILEAT 895

[Close]

BLAST of HG10011927 vs. ExPASy TrEMBL
Match: A0A1S4DXP9 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 658/845 (77.87%), Postives = 673/845 (79.64%), Query Frame = 0


Query: 139 MQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWLIR 198
           MQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLDDEGLLALPGEE+S WLIR
Sbjct: 1   MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60

Query: 199 PQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMPLH 258
           PQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ KKT RILCLA RNMPL 
Sbjct: 61  PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120

Query: 259 WAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKTSQLEFRDVMASGSL 318
           WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS++GKTSQLEFRDVM+SGSL
Sbjct: 121 WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKTSQLEFRDVMSSGSL 180

Query: 319 FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI------------------ 378
           FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI                  
Sbjct: 181 FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNTF 240

Query: 379 ---------------------------------------FTIIIEEEEGELKEEDECSPS 438
                                                   TIIIEEEE E K ED+CSPS
Sbjct: 241 LGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPK-EDDCSPS 300

Query: 439 KSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEY 498
           KSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQAA KAVMFISGVAVGNEY
Sbjct: 301 KSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNEY 360

Query: 499 YDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGW 558
           YDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNA S+QVPRSAS+QVVGW
Sbjct: 361 YDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVGW 420

Query: 559 SSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFP 618
           SSFMKGS LTPSMVNALVA PAS                                     
Sbjct: 421 SSFMKGSPLTPSMVNALVATPAS------------------------------------- 480

Query: 619 QKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKI 678
                                                               SLAEIEKI
Sbjct: 481 ----------------------------------------------------SLAEIEKI 540

Query: 679 YEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDY 738
           YEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL PPIP D+SGSDSYLIDY
Sbjct: 541 YEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLLLPPIPTDYSGSDSYLIDY 600

Query: 739 APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA 798
           APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA
Sbjct: 601 APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA 660

Query: 799 VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKA 858
           VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLKA
Sbjct: 661 VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKA 720

Query: 859 RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK 918
           RRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK
Sbjct: 721 RRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK 755

Query: 919 INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR 927
           INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR
Sbjct: 781 INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR 755

[Close]

BLAST of HG10011927 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 791.2 bits (2042), Expect = 9.1e-229
Identity = 440/953 (46.17%), Postives = 589/953 (61.80%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           +WD V+ELTK AQ+   DP LWA QLSS L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           KFLE+AM  ++V PL+V+ LL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           ++M ++ ++L L+++F L T  PGVL+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
           ++ Q  DME+D  + + EK T + E +  +NT  AIE+I +FL+    AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGK-TSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI-FTIIIEEEEGEL-- 376
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +      ++E  G    
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377 ---------------KEEDEC-SPSKSRDEKQSSGKC----------------------R 436
                          +E D    P    D +     C                      R
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVMEKLR 428

Query: 437 KGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINC 496
             L+ SLQ+LG++  LL PP+ V++ AN+AATKA++F+SG  VG   +D +++ D P+NC
Sbjct: 429 DDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVNC 488

Query: 497 SGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSM 556
           SGNMRHLIVEACI+RN+LD SAY WPGYVN R NQ+P+S  ++V  WSSF+KG+ L  +M
Sbjct: 489 SGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAM 548

Query: 557 VNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLH 616
           VN LV+ PAS                                                  
Sbjct: 549 VNTLVSVPAS-------------------------------------------------- 608

Query: 617 IYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETI 676
                                                  SLAE+EK++E+A+ GS DE I
Sbjct: 609 ---------------------------------------SLAELEKLFEVAVKGSDDEKI 668

Query: 677 SAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISS 736
           SAA++LCGASL RGWN+QEHT  +++RLLSPP+PAD+S ++++LI YA  LNV++VGI S
Sbjct: 669 SAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGS 728

Query: 737 VDCVQIFSLHGMVPLLAGQLMPICEAFGS-SPPKSWILTSGEELTCHAVFSLAFTLLLRL 796
           VD +QIFSLHGMVP LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+L
Sbjct: 729 VDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKL 788

Query: 797 WRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLE 856
           WRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + R        S +
Sbjct: 789 WRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQ 848

Query: 857 PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTT 916
           P+F+DSFPKLK WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    
Sbjct: 849 PVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVN 868

Query: 917 SGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG 927
           SG+S+SSG+A+E+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATG
Sbjct: 909 SGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATG 868

[Close]

BLAST of HG10011927 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 751.9 bits (1940), Expect = 6.1e-217
Identity = 455/988 (46.05%), Postives = 557/988 (56.38%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           LW+SV  L +SAQ+KN DPL WA+QL  TL+SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           K LEKA++  IVPPLLV+ LLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           + M +IDD+LHL++ FG+Q  +PG +++   FSIVW+LLDASLD+EGLL L   +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
               PHDM+LD  ++   KR EN +++ K NT  AIE+I +FLQ K T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKT-SQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTI------------ 376
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L   +            
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377 ------------------------------------------------------------ 436
                                                                       
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437 ----IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIA 496
               IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YESLLTPP+SV +
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497 VANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
           VANQAA KA+MFISG+   N  Y+  S++++   C           C  R  L T   F 
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 557 PGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNR 616
              V    N         +  WS  MKGS LTPS+ N+L+  PAS               
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPAS--------------- 609

Query: 617 FGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLK 676
                                                                       
Sbjct: 610 ------------------------------------------------------------ 669

Query: 677 QKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFI 736
                         SLAEIEK+YE+A  GS DE I+ ASILCGASL RGW++QEH  +FI
Sbjct: 670 --------------SLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFI 729

Query: 737 SRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICE 796
             LLSPP PAD SGS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICE
Sbjct: 730 VTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICE 789

Query: 797 AFGSSPPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPE 856
           AFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD  PVG Q +PE
Sbjct: 790 AFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPE 832

Query: 857 YLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASIL 916
           YLLLVRN +L  FGKSPKDR+  RR SK++  S++PIFMDSFP+LK WYRQHQEC+ASIL
Sbjct: 850 YLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASIL 832

Query: 917 SGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDI 927
           S L  G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDI
Sbjct: 910 SELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDI 832

The following BLAST results are available for this feature:

BLAST of HG10011927 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887593.1	0.0e+00	80.87	mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hi...	[more]
XP_008449381.1	0.0e+00	80.06	PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform ...	[more]
XP_022155567.1	0.0e+00	79.15	mediator of RNA polymerase II transcription subunit 33B-like [Momordica charanti...	[more]
XP_023554812.1	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo sub...	[more]
XP_022963527.1	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata...	[more]

BLAST of HG10011927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	1.3e-227	46.17	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	8.6e-216	46.05	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of HG10011927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMJ1	0.0e+00	80.06	mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum...	[more]
A0A6J1DPP9	0.0e+00	79.15	mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan...	[more]
A0A6J1HFH4	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha...	[more]
A0A6J1HUY1	0.0e+00	78.66	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima...	[more]
A0A1S4DXP9	0.0e+00	77.87	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucum...	[more]

BLAST of HG10011927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	9.1e-229	46.17	REF4-related 1	[more]
AT2G48110.1	6.1e-217	46.05	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..391
None	No IPR available	PANTHER	PTHR33739:SF11	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A-LIKE	coord: 613..926 coord: 373..527
None	No IPR available	PANTHER	PTHR33739:SF11	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A-LIKE	coord: 14..359
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 613..926 coord: 373..527 coord: 14..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011927.1	HG10011927.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016592	mediator complex