HG10016059 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA MKILEKLHNLLPKKWRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLNLAKFHLSLDKFELDSI Homology
BLAST of HG10016059 vs. NCBI nr
Match: KAF8402501.1 (hypothetical protein HHK36_010586 [Tetracentron sinense]) HSP 1 Score: 71.2 bits (173), Expect = 5.2e-09 Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of HG10016059 vs. NCBI nr
Match: KAF8399813.1 (hypothetical protein HHK36_015684 [Tetracentron sinense]) HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of HG10016059 vs. NCBI nr
Match: XP_022018260.1 (auxin-responsive protein SAUR50 [Helianthus annuus] >KAF5771543.1 putative small auxin-up RNA [Helianthus annuus]) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07 Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of HG10016059 vs. NCBI nr
Match: KAB1224620.1 (Auxin-induced protein X15 [Morella rubra]) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of HG10016059 vs. NCBI nr
Match: KAF9591132.1 (hypothetical protein IFM89_002087 [Coptis chinensis]) HSP 1 Score: 65.1 bits (157), Expect = 3.7e-07 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-07 Identity = 25/61 (40.98%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.6e-07 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 22/63 (34.92%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06 Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A251S3N0 (Putative SAUR-like auxin-responsive protein family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0531781 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.1e-08 Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A6A1WP92 (Auxin-induced protein X15 OS=Morella rubra OX=262757 GN=CJ030_MR2G009971 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A2N9J801 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60461 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A4P1QYC8 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12352 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A5C7HLR0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015637 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.0e-07 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of HG10016059 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08 Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of HG10016059 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of HG10016059 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 54.3 bits (129), Expect = 6.1e-08 Identity = 22/63 (34.92%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of HG10016059 vs. TAIR 10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 54.3 bits (129), Expect = 6.1e-08 Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of HG10016059 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08 Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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