HG10016059 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10016059
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxin responsive SAUR protein
LocationChr03: 2503040 .. 2503324 (+)
RNA-Seq ExpressionHG10016059
SyntenyHG10016059
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA

mRNA sequence

ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA

Coding sequence (CDS)

ATGAAGATTTTAGAAAAGTTGCATAACCTCTTGCCAAAGAAGTGGAGATTGAAGAAAGGACATTTTGTAATATACGTAGGGAAACAACAAAAACGATATGTTATTTCATTAAAGTATTTGTCATCCGTCACCTTTCAAAATTTATTGAATCAATTCGAAGATGAAATATATTCAGGACAAGATGGACAATTGATATTACCATGCTCCACCCGAGTGTTTGAAGACGTCTTGAATTTGGCTAAATTTCACTTGTCTCTTGATAAATTTGAATTAGATAGTATATGA

Protein sequence

MKILEKLHNLLPKKWRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLNLAKFHLSLDKFELDSI
Homology
BLAST of HG10016059 vs. NCBI nr
Match: KAF8402501.1 (hypothetical protein HHK36_010586 [Tetracentron sinense])

HSP 1 Score: 71.2 bits (173), Expect = 5.2e-09
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0

Query: 13  KKWRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRV 72
           K  R+ +G   IYVG+++ ++V+ LK LSS  FQ LLNQFEDEI +  +G + +PCST++
Sbjct: 33  KHSRVPEGSLPIYVGEERMKFVVPLKCLSSTMFQALLNQFEDEIDAKVEGPIAIPCSTQM 92

Query: 73  FEDVLNLAK 82
           F+ VL+LAK
Sbjct: 93  FQWVLDLAK 101

BLAST of HG10016059 vs. NCBI nr
Match: KAF8399813.1 (hypothetical protein HHK36_015684 [Tetracentron sinense])

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 24 IYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 79
          IYVG+++KRYV+ L YLSS  FQ LL QFEDEI +   G + LPCST++FE VL+
Sbjct: 30 IYVGEERKRYVVPLGYLSSTLFQALLYQFEDEIVADSKGPIALPCSTQMFECVLD 84

BLAST of HG10016059 vs. NCBI nr
Match: XP_022018260.1 (auxin-responsive protein SAUR50 [Helianthus annuus] >KAF5771543.1 putative small auxin-up RNA [Helianthus annuus])

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGHFV+YVG+ + RYVI + +LS   FQ LL+Q E+E     D  LI+PC  + FE + +
Sbjct: 40  KGHFVVYVGENRSRYVIPISFLSRPEFQTLLHQAEEEFGFNHDMGLIIPCEEQTFESLTS 99

Query: 79  LAKF 83
           L +F
Sbjct: 100 LLRF 103

BLAST of HG10016059 vs. NCBI nr
Match: KAB1224620.1 (Auxin-induced protein X15 [Morella rubra])

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 16 RLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFE-DEIYSGQDGQLILPCSTRVFE 75
          R KKGH ++YVGK  KRY + LKYLS   FQ L++Q + DE+    DG ++L CST VF+
Sbjct: 33 RAKKGHVMMYVGKVGKRYEVPLKYLSLPAFQELIDQSQPDELDITIDGPIVLACSTEVFD 92

Query: 76 DVLNLAK 82
            L++A+
Sbjct: 93 QFLSMAE 99

BLAST of HG10016059 vs. NCBI nr
Match: KAF9591132.1 (hypothetical protein IFM89_002087 [Coptis chinensis])

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-07
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDE---------IYSGQDGQLILPCS 78
           +G+ +IYVG++ K Y++ L+YLS   FQ LLNQFE++         I +  +G ++LPCS
Sbjct: 38  EGYALIYVGEEHKSYMVQLQYLSCPMFQALLNQFEEQLRNIYLVHRINAHPEGPIVLPCS 97

Query: 79  TRVFEDVLNLA 81
             +FE VLNLA
Sbjct: 98  VELFESVLNLA 108

BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-07
Identity = 25/61 (40.98%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 17 LKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEI-YSGQDGQLILPCSTRVFED 76
          ++KG+  +YVG++ +R+VI + YL+  +FQ+LL+Q E+E  Y   +G L +PCS  VF+ 
Sbjct: 25 VEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQH 84

BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.6e-07
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 19 KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEI-YSGQDGQLILPCSTRVFEDV 77
          KG+  +YVG++ KR+VI + Y++  +FQ+LL Q E+E  Y    G L +PCS  VF+ +
Sbjct: 19 KGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77

BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 19 KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEI-YSGQDGQLILPCSTRVFE 75
          KG+  +YVG++ KR+VI + YL+  +FQ+LL+Q E+E  Y    G L +PCS  VF+
Sbjct: 19 KGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 22/63 (34.92%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGHF +YVG+ + RY++ + +L+   FQ+LL + E+E     D  L +PC   VF+ + +
Sbjct: 45  KGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTS 104

Query: 79  LAK 82
           + +
Sbjct: 105 MIR 107

BLAST of HG10016059 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 19 KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPC 69
          KGHFV+YVG+++ RY++ +  L   TFQ+LL + E+E     D  +I+PC
Sbjct: 41 KGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPC 90

BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A251S3N0 (Putative SAUR-like auxin-responsive protein family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0531781 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.1e-08
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGHFV+YVG+ + RYVI + +LS   FQ LL+Q E+E     D  LI+PC  + FE + +
Sbjct: 40  KGHFVVYVGENRSRYVIPISFLSRPEFQTLLHQAEEEFGFNHDMGLIIPCEEQTFESLTS 99

Query: 79  LAKF 83
           L +F
Sbjct: 100 LLRF 103

BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A6A1WP92 (Auxin-induced protein X15 OS=Morella rubra OX=262757 GN=CJ030_MR2G009971 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 16 RLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFE-DEIYSGQDGQLILPCSTRVFE 75
          R KKGH ++YVGK  KRY + LKYLS   FQ L++Q + DE+    DG ++L CST VF+
Sbjct: 33 RAKKGHVMMYVGKVGKRYEVPLKYLSLPAFQELIDQSQPDELDITIDGPIVLACSTEVFD 92

Query: 76 DVLNLAK 82
            L++A+
Sbjct: 93 QFLSMAE 99

BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A2N9J801 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60461 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1  MKILEKLH-NLLPKKWRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSG 60
          + + +K+H NL+P       G   ++VG+++K YVI    LSS  FQ L NQFED+I  G
Sbjct: 23 LSVKKKIHENLVP------SGFLAMHVGEERKLYVIPNTCLSSKMFQALFNQFEDKIMVG 82

Query: 61 QDGQLILPCSTRVFEDVLNLAK 82
              + LPCS+++FE +LNLAK
Sbjct: 83 DKEPITLPCSSQMFEWILNLAK 98

BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A4P1QYC8 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12352 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 2  KILEKLHNLLPKK--WRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSG 61
          KIL++  +L  K+  + + KGHFV+YVG+ + RY++ + +LS   FQNLL+Q E+E    
Sbjct: 17 KILKRCSSLGKKQQDYDVPKGHFVVYVGENRSRYIVPISFLSHPEFQNLLHQAEEEFGFD 76

Query: 62 QDGQLILPCSTRVFEDVLNLAK 82
           +  L +PC   VFE + ++ K
Sbjct: 77 HEMGLTIPCQEHVFESLTSMLK 98

BLAST of HG10016059 vs. ExPASy TrEMBL
Match: A0A5C7HLR0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015637 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-07
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 13 KKWRLKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRV 72
          +K R  KGHFV+YVG++++R+V+ L YL + TFQ LL++  +E       +++LPC    
Sbjct: 20 RKSRAPKGHFVVYVGEEERRFVVPLSYLKNTTFQQLLHKAAEEYGFVSQNRIVLPCDEST 79

Query: 73 FEDVLNLAKF 83
          F+ ++N   F
Sbjct: 80 FQTLINRIYF 89

BLAST of HG10016059 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGH V+YVG++ KR+VI++  L    FQ LL+Q +D      D +L +PC+   F DV+ 
Sbjct: 51  KGHLVVYVGEEYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNESTFLDVVR 110

Query: 79  LA 81
            A
Sbjct: 111 CA 112

BLAST of HG10016059 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08
Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGHFV+YVG+ + RYV+ + +L+   FQ LL Q E+E     D  L +PC   VF  + +
Sbjct: 46  KGHFVVYVGENRVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTS 105

Query: 79  LAK 82
           + +
Sbjct: 106 MLR 108

BLAST of HG10016059 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 54.3 bits (129), Expect = 6.1e-08
Identity = 22/63 (34.92%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 19  KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
           KGHF +YVG  + RY++ + +L+++ FQ LL + E+E     D  L +PC    F+D+ +
Sbjct: 46  KGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTS 105

Query: 79  LAK 82
           + +
Sbjct: 106 MIR 108

BLAST of HG10016059 vs. TAIR 10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 54.3 bits (129), Expect = 6.1e-08
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0

Query: 19 KGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDVLN 78
          KGHFV+YVG  + R+VI + +L+   FQ LL Q E+E    QD  L +PC    F  +++
Sbjct: 36 KGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFRALIS 95

BLAST of HG10016059 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08
Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 17  LKKGHFVIYVGKQQKRYVISLKYLSSVTFQNLLNQFEDEIYSGQDGQLILPCSTRVFEDV 76
           + KG+  + VGK++KRY I  +YLS   F  LL + E+E    Q G L +PC   VFE +
Sbjct: 80  IPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAVFESI 139

Query: 77  LNL 80
           L +
Sbjct: 140 LKI 142

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF8402501.15.2e-0950.72hypothetical protein HHK36_010586 [Tetracentron sinense][more]
KAF8399813.12.6e-0860.00hypothetical protein HHK36_015684 [Tetracentron sinense][more]
XP_022018260.11.7e-0746.88auxin-responsive protein SAUR50 [Helianthus annuus] >KAF5771543.1 putative small... [more]
KAB1224620.12.9e-0749.25Auxin-induced protein X15 [Morella rubra][more]
KAF9591132.13.7e-0745.07hypothetical protein IFM89_002087 [Coptis chinensis][more]
Match NameE-valueIdentityDescription
P330832.3e-0740.98Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1[more]
P330826.6e-0742.37Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1[more]
P330811.1e-0645.61Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1[more]
O656951.1e-0634.92Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
P0DKL11.9e-0644.00Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A251S3N08.1e-0846.88Putative SAUR-like auxin-responsive protein family OS=Helianthus annuus OX=4232 ... [more]
A0A6A1WP921.4e-0749.25Auxin-induced protein X15 OS=Morella rubra OX=262757 GN=CJ030_MR2G009971 PE=3 SV... [more]
A0A2N9J8012.4e-0743.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60461 PE=3 SV=1[more]
A0A4P1QYC82.4e-0739.02Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12352 PE=3 S... [more]
A0A5C7HLR04.0e-0738.57Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015637 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37030.12.8e-0841.94SAUR-like auxin-responsive protein family [more]
AT1G75580.13.6e-0839.68SAUR-like auxin-responsive protein family [more]
AT2G16580.16.1e-0834.92SAUR-like auxin-responsive protein family [more]
AT5G66260.16.1e-0841.67SAUR-like auxin-responsive protein family [more]
AT4G31320.18.0e-0841.27SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 18..79
e-value: 3.1E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 11..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10016059.1HG10016059.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin