HG10009247.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009247.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr06: 3921615 .. 3928674 (-)
Sequence length	1632
RNA-Seq Expression	HG10009247.1
Synteny	HG10009247.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCAGCAGTTTCCGGCGAAGGATTCCGGCAATTTCCAGTACAAAAAACAACAAGACTCGCCACAATCTCTCTCCATCTCCTCACCGGAGAACTCCCCCGACGAATCGCGCTCCTTCCAAGCCCTCCATCTTTACCAGATGCTCCTCGGAGCCCAACCTTTGGACCACCGCCGCTAATCGCACTGTGTCATCGGAGAAGGAAGGGGAAGAGATTGTTATTTTCCGTCCCCATACGTTTTCAGAAGCCTTTGCTTCATCCCCTCTCTTGATTCCTTCCCCCGCTCCATTCCTCGAGGTTAGGGCTCCGATTTTTCTTATTGCGAATCCCCGATTTTTGCTTTTCCTTAAATCAAATTACCAAAAAATAAGTTAATTCTTTATCTGATTAGAATCATTAGATATTGCTTTCCCTTATTTACTCTGCAATCGTATTTTCTGGCCCTTAATTTTAGTATTAAAAAAACACTGAGATTCAAAAGGGGTTCTGCAATGCAGGGCTACAAGAAAGATGCTAAAGTAGTGATTAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTAGGATCAAGTGTGGACGACACAATTAAGCTTGTTGTTGCTAAATATGGTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTGATTCACCATCTTCCTTTGAATTGCATCACTCATATTTCAGCCTCCACAGTATGAAAAATTATTTCTTCATTTACTCTACTCTCCTTACAATTTAAGAGAAACCCAATTGAGTTGCCATTCTGTATCCTCTGCTCAGGTCTTGACAGGAGAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTAGAAAGACCCATAGCTCTCATGGAAAAAATGGTGGAGAATCATCTACTGCTTCCACTCAAGGAAGTACCAAAGAAATCAGAGATGTTGCTTTACCAATTCCTCCTGGCTTCTTGCTTTCTAGCTTCATTGCTAGGAAAATGGGCAAAATTGTAAGAAGAACAAGAAAGCTCTGGAATTTCATTGTCTGCTTGAAGTAAGAGTATGAATCTAACCAAAAATTAGAAACTAAGAGTAACACAGCATATTATATATGTTACTCTTTAACATTAATGTCCCATTTTCTTTGTTTTTGGGTATATTGTCCTCTCATTATATTTATAGGAGGGGAATTCTCAGGCTTATGAGTTGAAGAAATACCATTTGAGTTAGGCTCAAATGGACTAAATAAACTGTATATAGAACATATTGTTATTTATAGACACTGTATTGTTACAAGATTGTAATGGTAAATAGAGAGAATTCAATACCAAAACTTTTATTCAGATTCTCCACTATGTGGTGGTTTCCAATTGCTAAATCATCTCCTTTAGCTATATGCACTTTACTCTTCTTAAAAGAATCAATCCTTTTCTTTCAAGAGTGAACCATCTACGTTTTTCTTTCTTTTTATGTCATTGATTTGTCACATTTGGTTGAATTAGTCTATGTTTACTTCACAAGTATGTCACATCATTATCAGAAATTTTGTATTATATTTCAACGGCAATGTTATATTTAAAAATACACATCATATATTGTTTTTTTTATTTCTACAATTTCACGAGCTTTTTAGTGAATCTAGTAGTCACAATTGGGTTACATACTTAATATACCATATGAACACTATATGAGCTATATAAATTTCTCAAAATAACTTGGCCCAGTATATATGATGAATACTATGAAAACAGTAACAAGAAGACGGAATTGACATAGCGAAATGAGAGTTGTCAATGTAAATATACCATATATTTTTTAATTTATATACACAGGCATAATTCAAATTAGTTTATTCTCATCCCTAGTCAATCTATTAATTATTGAACAGCTTATTGTGAGCTATATTTGAAAAATATATCAAATGAAGATTAAGGCACAAAAAATTCAAATGAAGATTAAGGCACAAAAAATGGAAAAGCTGACTGTAGCATAATAAGGCAAAAAAATCATACTCATTTACACAAATAATATTCAATGCGAAAAAAATAATGCCATTAATGAAACAAATGAAGACGAAAGCAATGAAAGGAAATTACGGATAATAACAAAATAAAAAAATAAAAAAAAATAAAAAAAATCTGGTTTTCAACGTCAATTTCGAGATCATATGTAATTAATGAGTGAATTAATGATAAATGTTAAGAAAAATAAGAATTTCAAAATAAATTAATGTGATTAATGAGGCCTATGTTTTCGATCTGTGGAATACCTTTTTTATTAAATAAAAATTTTAAAAATACATTAAACGAGGGATTATATATTTATGGAAGGATATTTGTGTAAAGAAAAAAAAAACGTCAAACTTCTGAAAATGTTAAAAAATAAAATTGATAAATTCTGGACATTAGTGAAATATGGTATCTGAGAATACGTATATACCTTAATTTCTTATAAATTATGTGGATAGAAAAAAAGAAAAAAAAATTGTGCCAGTTTAGTTGGGACGATTAATATTTATGTTGTTATTGTCACTCATCATTTAAAGGACAAAATATAGACTCTTTTTTTAAAAAATAAGGGACAAAATTAGACAGAATATAATCATCCTAGGTTGGACTAGTGGTAGTGAGAACATCTAAAAAAGGTCAAAAGACTAAGGAGTCATGGGTTCAATCCATGGTGACCAAAGTTGTAATTTTAATATCTAAACATTTACTCATTAATTGTACATTTAATAGTGGTAACATTATAAATCTATGTTTATGGCTAGTAAGAACACTCTTGAAGAGTTGATCCAACATATTCAAGGGGCTTTGGATCAAATATACCTAGGTTGACAAGATAAATAACCAATTTTAAAGTTCCGTTTGTAAAAATATAAAAAAGTCTTCAAAATTGTAAAGTTAGCCAATTTAAAAGTTTTGTTTGTAAAAATATCAAAAAGTCTTCAAAATTGTAAAAATAACAAAATGATTTTTAAAAATAAAAAATACTAATTAGAAAATGTCCAGAACTACCCACATGCACACTAAAATTGATAGAAACTAACATCACATACTAAAATAAATTCAAAAAGATCTAAACCCACATGATATTAGTGAGATCACTAATAGCATGTTATCAGTAATATAAGTTATAATTGATCAAAGCTATCACTAATAGCATGATATCATTGATAGCATGTCATCATAAGCTATCGTTGATAACCATGACGAATGAAGGTGGAAACATTTCATTTGCCAATATTTATGAAATGTGGGATTTTGGATTGAAAGTTGAAAAAGAGATTTTGGTTGTTGATTGGTTTTGTTTGGATTTCGTTTTGGCTAATTATAGGTTGTGGGCTTTAGGCTTTTTAGTCTTTTAAGTTTGTGCTATATTCGCAATATTTTTTGTCTTGCGCTATAAATGCTAATTTTTAGGGCCGAATTGCTATTTATGCAACCCAATTGAGAGGCTTTTTGGATATGGGCCTCATTGGAGCCCACCAATCACTTATCGGGCTCAGCGTATTTCATAGAAGCCCAAAAGGCCCAATTCAGAATTCTGACTCTCGCCTGATCCTTCGCCACTGTGTCATCTTCTTCAGAATCAGACCCAAAAACGGGTCTAGCTCTTTCGCATTGGGTGTTACTGTAATCGACCGGGAATGGCAGTCTCTTCTACTCCCTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGGTTTTCCTCATCTTCCGACTATTAGTTATTTATGCTATTCGCGTCGCTTACCTGATTTCGTTTCGATTTTCTGAATTTTGCAAGCTTTACGACCAAGGTTTACTCGGGACTAAAGCCTCAATCTGCTAGTGAGCTTGCATTCCCTTCCTTCTCATGATGTTACTCATCTGTTTGACTGCTTCTTAATTACGTATCGCTTCTGTTTGTTTTCAAATTGCAAGGTCCTTTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGTAATTGTAGCTTTAGTTAAGCCGTTGTAGTTAACTTATTTTCAAGTCATGGTTCTTGCCAAAATATATTTTCTGTTGCTAAAGTGGTTTGCTTCATTACTCCTAACTCCTAGGTCGTTATTTGTTTCCTTCACGAAATATTATCGTTCCCTTTCTGAAAAATCATGTGATAATGCACGGAGTCAGGAGAGATTGACTTGAAATCCTTCTTATAGCGTAGTGTGCAGAAACTATCATCGATTTTATGCCGGTTCTACTGAATATGGGAATTGCACTACTTCTTTTGGCCCGTTTGAATACCTTTTCTTTTCGTTCAGTTACTGAATTTGAGAGCTTGGAGGACCGTGGATGTGTATTCGATTTACCAAAACATGGTCATATATTATGCAACTATTTGGCAATATTTACGCTCTGTTTGTTAACCATTTAGGCATGCTTTGGTAACCATTTGGTTTTTAGTTTTTTAAAAATTAAGCCTATAAACACCACTTTCATCTATTCAAACCATTTAGGCATGCTTTGGTAACCATTTGGTTTTCGGTTTTTTAAAAATTAAGCCTATAAACACCACTTTCATCTATTGGTTTTTATGTTTTGTTGTCTACATTTTAGGAGTGTTTCAAAATCAAAACCAAAATTTGAAAACTAAAAAAGTAATTTTCAAAAAACTTGTTTTTGTTTTAAAAAATTGTCTAAGAATTCAAATATTTATATAGGAAGTATGAAAATTATGAGTAAGAAATTGTGAGATAACAAGCACAAATTTAAAAAACCAAAAACTGAAAACCAAATGGTTACCAAACATGTTTTTGGCTTTTGAAAATTGTGCTCGATTGCTCGTTTTCTCACATATTCTTTACAATGTTTTTTTATTTTTATTAAGAAAACATTTGAATTCTTAGCAAAATTTATAAAGCAAAAACAAGTTTTTAAAAACTATTCTTTTTCCTTCTAATTTCTAAAAACTTATTTTTGTTTGTTTGTTTAAGAAATGTGAAAACCATACTAAAGAAATAGGGAATTGACAAACATAAATTTTAAAAACATAAAATTAAAAACAAAATCGTCATTAAATGGGGCCCGTTATTTTCTGTATTTTCCATTCAAACCTTTCTTGGTGTTTAAAGATGATTTCGATTCTACTGATTGGTGCTTGCTTTGTCGATGACATCTGTAAGGACAACAATGTCGAAGGTGTTTCAGTTGCATCCTACCCTACGTGCATTTGTCTGGCAGTTAATGTATTTCTTCTAATTCATTACTTTACATGCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTAGTAAGTGATAGATCTAGTTATTTAATTTTTGCTCCGACTGAGGCTGAGCGAAATTTTAGTTTGATATTATGAGACTCACCAGCCATGGCACATGAGTTGCAGTGGCTACAATTGAGTCACCACAAAATTTACCAGTGTAAAACTCTTCACAGTAGAAAGATGCTGCTTTAGGTTTTATCATTTTCTTACATTATGTCCTTTTCCTTTCCTGTCCAATTATACCGAAGTAAACTTCTCTTGGCTAGAAGATATCAATATAAAAATTTACTATTTTTTTTTATCAAATTTATTTTTAAAATGAATATATAGTTTACTGAACTTTTACAATCTCGGCATTCCTTGTGTGCAGTATCGAGAACGAGTTATTTTCATTGGGCAAAACATTGACGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTGAAACTTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATGTGAGTTAAATATATATATGTTTTATTGGGATCAAGTCCATCATAATTATGTCTTATATTTTCCTTTTCTCTTGGTTATATTCTAATGGTTCTTTTAGCATTAATTTTCTGATGAAACCACGCATCTTTGCAGCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAAGAGTCCTGTAGCTACCCATTGTGTGGGTTACGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGTAAATACGGATTTAATTATTGTCAAACAAAAGTTGGAATTTGTAGGGAGTTCTTCCGTATGGTAAACGTGACCCCTACTTTTTCAGCTAGTCAAATCATTTATATCCATCAAAACAAATCTTATGCAACTAATAAATAAATCCTAAACCCTTATATTTGCATCGAATAAAAATGGTAATGCTCATTGATTTTACCTAACTGTCCCCAATGCACGCTTTATGAAACCTCTGTCTCCTTGCTTGTTGGCCTCCTTTTATCTCTTTTAAATCTTACCACACCTTTCCTTCTTAAGGGTAACCGTTTTGCTATGCCTCTATCAAGAATTGCTTTGCAGTCCCCAGCTGGATCTGCTCGCGGCCAGGTATCATTAATTTGTTGTATCATGTCATGCAAATTGATCATATATGACCTTTCTAAGTTCTAAACATTTTGTTCTGTTACATTTTTGTTCGAAAATCATTTTGCTAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATTAGGGATTATCTTTATGATGAACTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGGTCAGTTCGTCAGCTCTATAGCATATAATAATATCTTCATTCATAATAAAACTTACTCTTACTATTAGTGAGATAACCAACATGAATTTTTGGGTTATGGACCCTGAGCTTTTACAAACTTGCAACATAGTTCGCTCTTGCCAATTTTGGATGTTACCTTGTATTAATTTTGAAATATTTCTGAGGAATGTAACCTTAACTTAGAGACCTTATAAATGGATAAATGCAGATTAACAAGGACTTGAGTCGAATGAAGCGATTTAATGCTCAGGAAGCTCTTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGGCTTGGTTAG

mRNA sequence

ATGTCGAGCAGCAGTTTCCGGCGAAGGATTCCGGCAATTTCCAGTACAAAAAACAACAAGACTCGCCACAATCTCTCTCCATCTCCTCACCGGAGAACTCCCCCGACGAATCGCGCTCCTTCCAAGCCCTCCATCTTTACCAGATGCTCCTCGGAGCCCAACCTTTGGACCACCGCCGCTAATCGCACTGTGTCATCGGAGAAGGAAGGGGAAGAGATTGTTATTTTCCGTCCCCATACGTTTTCAGAAGCCTTTGCTTCATCCCCTCTCTTGATTCCTTCCCCCGCTCCATTCCTCGAGGGCTACAAGAAAGATGCTAAAGTAGTGATTAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTAGGATCAAGTGTGGACGACACAATTAAGCTTGTTGTTGCTAAATATGGTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTGATTCACCATCTTCCTTTGAATTGCATCACTCATATTTCAGCCTCCACAGTCTTGACAGGAGAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTAGAAAGACCCATAGCTCTCATGGAAAAAATGGTGGAGAATCATCTACTGCTTCCACTCAAGGAAGTACCAAAGAAATCAGAGATGTTGCTTTACCAATTCCTCCTGGCTTCTTGCTTTCTAGCTTCATTGCTAGGAAAATGGGCAAAATTGTAAGAAGAACAAGAAAGCTCTGGAATTTCATTGTCTGCTTGAAAATCAGACCCAAAAACGGGTCTAGCTCTTTCGCATTGGGTGTTACTGTAATCGACCGGGAATGGCAGTCTCTTCTACTCCCTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGGTCCTTTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTATATCGAGAACGAGTTATTTTCATTGGGCAAAACATTGACGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTGAAACTTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAAGAGTCCTGTAGCTACCCATTGTGTGGGTTACGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGTTTTGCTATGCCTCTATCAAGAATTGCTTTGCAGTCCCCAGCTGGATCTGCTCGCGGCCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATTAGGGATTATCTTTATGATGAACTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTAACAAGGACTTGAGTCGAATGAAGCGATTTAATGCTCAGGAAGCTCTTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGGCTTGGTTAG

Coding sequence (CDS)

ATGTCGAGCAGCAGTTTCCGGCGAAGGATTCCGGCAATTTCCAGTACAAAAAACAACAAGACTCGCCACAATCTCTCTCCATCTCCTCACCGGAGAACTCCCCCGACGAATCGCGCTCCTTCCAAGCCCTCCATCTTTACCAGATGCTCCTCGGAGCCCAACCTTTGGACCACCGCCGCTAATCGCACTGTGTCATCGGAGAAGGAAGGGGAAGAGATTGTTATTTTCCGTCCCCATACGTTTTCAGAAGCCTTTGCTTCATCCCCTCTCTTGATTCCTTCCCCCGCTCCATTCCTCGAGGGCTACAAGAAAGATGCTAAAGTAGTGATTAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTAGGATCAAGTGTGGACGACACAATTAAGCTTGTTGTTGCTAAATATGGTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTGATTCACCATCTTCCTTTGAATTGCATCACTCATATTTCAGCCTCCACAGTCTTGACAGGAGAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTAGAAAGACCCATAGCTCTCATGGAAAAAATGGTGGAGAATCATCTACTGCTTCCACTCAAGGAAGTACCAAAGAAATCAGAGATGTTGCTTTACCAATTCCTCCTGGCTTCTTGCTTTCTAGCTTCATTGCTAGGAAAATGGGCAAAATTGTAAGAAGAACAAGAAAGCTCTGGAATTTCATTGTCTGCTTGAAAATCAGACCCAAAAACGGGTCTAGCTCTTTCGCATTGGGTGTTACTGTAATCGACCGGGAATGGCAGTCTCTTCTACTCCCTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGGTCCTTTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTATATCGAGAACGAGTTATTTTCATTGGGCAAAACATTGACGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTGAAACTTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAAGAGTCCTGTAGCTACCCATTGTGTGGGTTACGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGTTTTGCTATGCCTCTATCAAGAATTGCTTTGCAGTCCCCAGCTGGATCTGCTCGCGGCCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATTAGGGATTATCTTTATGATGAACTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTAACAAGGACTTGAGTCGAATGAAGCGATTTAATGCTCAGGAAGCTCTTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGGCTTGGTTAG

Protein sequence

MSSSSFRRRIPAISSTKNNKTRHNLSPSPHRRTPPTNRAPSKPSIFTRCSSEPNLWTTAANRTVSSEKEGEEIVIFRPHTFSEAFASSPLLIPSPAPFLEGYKKDAKVVINVTVEGSPGPVRAMVKLGSSVDDTIKLVVAKYGEEGRTPKLEPTDSPSSFELHHSYFSLHSLDRREIIGEIGSRSFYLRKTHSSHGKNGGESSTASTQGSTKEIRDVALPIPPGFLLSSFIARKMGKIVRRTRKLWNFIVCLKIRPKNGSSSFALGVTVIDREWQSLLLPVFNLKLKFLSLLSGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

Homology

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BLAST of HG10009247.1 vs. NCBI nr
Match: KAF5729899.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2 chloroplastic [Tripterygium wilfordii])

HSP 1 Score: 519.6 bits (1337), Expect = 3.2e-143
Identity = 326/671 (48.58%), Postives = 399/671 (59.46%), Query Frame = 0


Query: 1   MSSSSFRRRIPAISSTKNNKTRHNLSPSPHRRTPPTNRAP--SKPS-IFTRCSSEPNLWT 60
           MS  + RRR+   ++    K     SPS  RRTPP   +   SKP  I  RC SEP L  
Sbjct: 1   MSGRNLRRRLRVNAADGRRKRPPQPSPSSRRRTPPMRLSVKCSKPQRIMKRCFSEPML-L 60

Query: 61  TAANRTVSSEKEGEEI-----------VIFRPHTFSEAFASS---PLLIPSPAPFLEGYK 120
           +     VS ++E   +           V++ P T ++ F+S+   P +       ++GYK
Sbjct: 61  SWKGEGVSDDQESSSLGSDHGDSGGVGVLYHPQTCADVFSSTSSLPGISTGNFEGVQGYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVDDTIKLVVAKYGEEGRTPKLEPTDSPSSFELH 180
           KDAKVV+NVTVEGSPGPVR MVKLG  V++TIKLV+ KY EE RTPK++ + S S +ELH
Sbjct: 121 KDAKVVVNVTVEGSPGPVRTMVKLGGCVEETIKLVLNKYNEEQRTPKIDKS-SQSLYELH 180

Query: 181 HSYFSLHSLDRREIIGEIGSRSFYLRKTHSSHGKNGGESSTASTQGSTKEIRDVALPIPP 240
            SYFSL SLD+ E+IG+IGSRSFYLR+  S+   N   SS            D+A P PP
Sbjct: 181 QSYFSLQSLDKSELIGDIGSRSFYLRRISSNLNTNKASSSLT---------LDIAPPSPP 240

Query: 241 G-FLLSSFIARKMGKIVRRTRK-------------------------LW----NFIVCL- 300
              L+S+FIA+   K++RRT +                         +W     FI+ L 
Sbjct: 241 AIILISAFIAQGFCKLIRRTGQSESILHSVMKDEKNIVCRRSMGDLYVWLISFFFIIALL 300

Query: 301 ----------------KIRPKNGSSS---------FALG----VTVIDREWQSLLLPV-- 360
                            I P + SS          F  G    + +I   W   L     
Sbjct: 301 VMVVFQLMCLADLEFDYINPYDSSSRINKAVFPEFFTQGALCILYLITGHWCMALFCAPY 360

Query: 361 --FNLKL----------------------------------KFLSLL------------- 420
             FN++L                                   FL++              
Sbjct: 361 LYFNVRLYTRKQHLVDVTEIFNQLHWEKKQRLFKLGYLIVNLFLAIFCCGSKHYAGLKLQ 420

Query: 421 -SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQW 480
              PF   +PNLTAE + +VHKSL  R  N K    +  MMP+GTP+VPYRTPGEG WQW
Sbjct: 421 SQVPFASGRPNLTAELFKRVHKSLHFR--NCKPNAMRITMMPVGTPQVPYRTPGEGGWQW 480

Query: 481 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAI 540
           VDLWNALYRERVIFIGQ IDEEFSNQ+LATMLYLDS+E +KK YMYINGPGGDLTP++AI
Sbjct: 481 VDLWNALYRERVIFIGQEIDEEFSNQVLATMLYLDSLEDNKKFYMYINGPGGDLTPTLAI 540

Query: 541 YDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQ 543
           YDTM+SLK+PV+T+CVG+AYNLA FL+A GEKG+R AMPLSRIALQ+PAG+ARGQADDI+
Sbjct: 541 YDTMKSLKNPVSTYCVGFAYNLAGFLVAGGEKGSRMAMPLSRIALQAPAGAARGQADDIR 600

[Close]

BLAST of HG10009247.1 vs. NCBI nr
Match: XP_022158384.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 498.8 bits (1283), Expect = 5.8e-137
Identity = 244/249 (97.99%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 295 PFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL 354
           PFGGAKPNLT EFYGKVHKSL +RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL
Sbjct: 37  PFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL 96

Query: 355 WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT 414
           WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT
Sbjct: 97  WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT 156

Query: 415 MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEA 474
           MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAG+ARGQADDIQNEA
Sbjct: 157 MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEA 216

Query: 475 NELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP 534
           NELLRIRDYL+DELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP
Sbjct: 217 NELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP 276

Query: 535 RKDAGTGLG 544
           RKDAGTGLG
Sbjct: 277 RKDAGTGLG 285

[Close]

BLAST of HG10009247.1 vs. NCBI nr
Match: XP_038906920.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 4.9e-136
Identity = 244/251 (97.21%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           + PFGGAKPNLTAEFYGKVHKSLQAR  NKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV
Sbjct: 35  ASPFGGAKPNLTAEFYGKVHKSLQARAQNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 94

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY
Sbjct: 95  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 154

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQSPAG+ARGQADDIQN
Sbjct: 155 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRCAMPLSRIALQSPAGAARGQADDIQN 214

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYLYDELSKKTGQPVEKIN+DLSRMKRFNAQEALDYGLIDRIVRPPRIKAD
Sbjct: 215 EANELLRIRDYLYDELSKKTGQPVEKINEDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 274

Query: 533 APRKDAGTGLG 544
           APRKDAGTGLG
Sbjct: 275 APRKDAGTGLG 285

[Close]

BLAST of HG10009247.1 vs. NCBI nr
Match: XP_008437161.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-132
Identity = 234/251 (93.23%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           + PFGG KPN+TAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWV
Sbjct: 35  ASPFGGVKPNITAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWV 94

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+Y
Sbjct: 95  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSRKFYMYINGPGGDLTPTMALY 154

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN
Sbjct: 155 DTMQSLNSPVATHCVGYAYNMAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 214

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYL++ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKAD
Sbjct: 215 EANELLRIRDYLFEELSKKTGQPVEKISKDLSRLKPFNAQEALDYGLIDRIARPPRIKAD 274

Query: 533 APRKDAGTGLG 544
           APRKDAGTGLG
Sbjct: 275 APRKDAGTGLG 285

[Close]

BLAST of HG10009247.1 vs. NCBI nr
Match: XP_028762735.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X1 [Prosopis alba] >XP_028762767.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like isoform X1 [Prosopis alba])

HSP 1 Score: 466.5 bits (1199), Expect = 3.2e-127
Identity = 226/251 (90.04%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           +GPFG  KPNLTAEFYGKVHKSLQ R+ N +A RA+ QMMPIGTPRVPYRTPGEGTWQWV
Sbjct: 34  AGPFGAGKPNLTAEFYGKVHKSLQWRSENHRATRARIQMMPIGTPRVPYRTPGEGTWQWV 93

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIFIG+ IDEEFSNQILATMLYLDS++ SKKLYMYINGPGGDLTPSMAIY
Sbjct: 94  DLWNALYRERVIFIGEEIDEEFSNQILATMLYLDSVDNSKKLYMYINGPGGDLTPSMAIY 153

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSL+SPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDI+N
Sbjct: 154 DTMQSLQSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIRN 213

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYL++EL+ KTGQPVEKI KDLSRMKRFNAQEAL+YGLIDRIVRPPRIKAD
Sbjct: 214 EANELLRIRDYLFNELASKTGQPVEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKAD 273

Query: 533 APRKDAGTGLG 544
           APRKDAG GLG
Sbjct: 274 APRKDAGAGLG 284

[Close]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot
Match: Q9XJ36 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 3.5e-108
Identity = 189/242 (78.10%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 302 NLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRE 361
           NL  EFYG+V+KSLQ+ T   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNALYRE
Sbjct: 40  NLNKEFYGRVYKSLQSGT--GKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRE 99

Query: 362 RVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSP 421
           RVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSP
Sbjct: 100 RVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSP 159

Query: 422 VATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIR 481
           V THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAG+ARGQADDIQNEA EL RIR
Sbjct: 160 VGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIR 219

Query: 482 DYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTG 541
           DYL++EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   G
Sbjct: 220 DYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAG 279

Query: 542 LG 544
           LG
Sbjct: 280 LG 279

[Close]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot
Match: Q8DJZ9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.3e-58
Identity = 107/193 (55.44%), Postives = 142/193 (73.58%), Query Frame = 0


Query: 332 MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS 391
           MPIG P+VPYR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60

Query: 392 KKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPL 451
           K + +YIN PGG +T  MAIYDTMQ +KS V T CVG A ++ +FLLAAG KG R A+P 
Sbjct: 61  KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 452 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNA 511
           SRI +  P+G  RGQA DI+ EA E+LR+R  L +  +  TGQP+EKI +D+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSA 180

Query: 512 QEALDYGLIDRIV 525
           +EA +YGLIDR++
Sbjct: 181 EEAKNYGLIDRVI 193

[Close]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot
Match: Q8YP43 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.9e-56
Identity = 104/193 (53.89%), Postives = 139/193 (72.02%), Query Frame = 0


Query: 332 MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS 391
           MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 392 KKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPL 451
           K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A ++ +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120

Query: 452 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNA 511
           SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180

Query: 512 QEALDYGLIDRIV 525
           QEA++YGLIDR++
Sbjct: 181 QEAMEYGLIDRVI 193

[Close]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot
Match: Q3MDK7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.0e-55
Identity = 104/193 (53.89%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 332 MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS 391
           MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 392 KKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPL 451
           K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A ++ +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 452 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNA 511
           SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180

Query: 512 QEALDYGLIDRIV 525
           QEA +YGLIDR++
Sbjct: 181 QEAKEYGLIDRVI 193

[Close]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot
Match: Q5N1Q7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-52
Identity = 101/194 (52.06%), Postives = 137/194 (70.62%), Query Frame = 0


Query: 332 MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS 391
           MPIG P VPYR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS ++S
Sbjct: 1   MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSS 60

Query: 392 KKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPL 451
           K +Y+YIN PGG +T  MAIYDTMQ +KSPV T C+G A ++ AFLL AG KG R A+P 
Sbjct: 61  KPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPH 120

Query: 452 SRIALQSP-AGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFN 511
           SRI +  P  G+ R QA DI+ EA E+LRI+  L   ++ +TGQP+EKI KD  R    +
Sbjct: 121 SRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMS 180

Query: 512 AQEALDYGLIDRIV 525
           A+EA +YGLID+++
Sbjct: 181 AEEAREYGLIDQVI 194

[Close]

BLAST of HG10009247.1 vs. ExPASy TrEMBL
Match: A0A7J7C6Z0 (ATP-dependent Clp protease proteolytic subunit OS=Tripterygium wilfordii OX=458696 GN=HS088_TW20G00266 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 1.5e-143
Identity = 326/671 (48.58%), Postives = 399/671 (59.46%), Query Frame = 0


Query: 1   MSSSSFRRRIPAISSTKNNKTRHNLSPSPHRRTPPTNRAP--SKPS-IFTRCSSEPNLWT 60
           MS  + RRR+   ++    K     SPS  RRTPP   +   SKP  I  RC SEP L  
Sbjct: 1   MSGRNLRRRLRVNAADGRRKRPPQPSPSSRRRTPPMRLSVKCSKPQRIMKRCFSEPML-L 60

Query: 61  TAANRTVSSEKEGEEI-----------VIFRPHTFSEAFASS---PLLIPSPAPFLEGYK 120
           +     VS ++E   +           V++ P T ++ F+S+   P +       ++GYK
Sbjct: 61  SWKGEGVSDDQESSSLGSDHGDSGGVGVLYHPQTCADVFSSTSSLPGISTGNFEGVQGYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVDDTIKLVVAKYGEEGRTPKLEPTDSPSSFELH 180
           KDAKVV+NVTVEGSPGPVR MVKLG  V++TIKLV+ KY EE RTPK++ + S S +ELH
Sbjct: 121 KDAKVVVNVTVEGSPGPVRTMVKLGGCVEETIKLVLNKYNEEQRTPKIDKS-SQSLYELH 180

Query: 181 HSYFSLHSLDRREIIGEIGSRSFYLRKTHSSHGKNGGESSTASTQGSTKEIRDVALPIPP 240
            SYFSL SLD+ E+IG+IGSRSFYLR+  S+   N   SS            D+A P PP
Sbjct: 181 QSYFSLQSLDKSELIGDIGSRSFYLRRISSNLNTNKASSSLT---------LDIAPPSPP 240

Query: 241 G-FLLSSFIARKMGKIVRRTRK-------------------------LW----NFIVCL- 300
              L+S+FIA+   K++RRT +                         +W     FI+ L 
Sbjct: 241 AIILISAFIAQGFCKLIRRTGQSESILHSVMKDEKNIVCRRSMGDLYVWLISFFFIIALL 300

Query: 301 ----------------KIRPKNGSSS---------FALG----VTVIDREWQSLLLPV-- 360
                            I P + SS          F  G    + +I   W   L     
Sbjct: 301 VMVVFQLMCLADLEFDYINPYDSSSRINKAVFPEFFTQGALCILYLITGHWCMALFCAPY 360

Query: 361 --FNLKL----------------------------------KFLSLL------------- 420
             FN++L                                   FL++              
Sbjct: 361 LYFNVRLYTRKQHLVDVTEIFNQLHWEKKQRLFKLGYLIVNLFLAIFCCGSKHYAGLKLQ 420

Query: 421 -SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQW 480
              PF   +PNLTAE + +VHKSL  R  N K    +  MMP+GTP+VPYRTPGEG WQW
Sbjct: 421 SQVPFASGRPNLTAELFKRVHKSLHFR--NCKPNAMRITMMPVGTPQVPYRTPGEGGWQW 480

Query: 481 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAI 540
           VDLWNALYRERVIFIGQ IDEEFSNQ+LATMLYLDS+E +KK YMYINGPGGDLTP++AI
Sbjct: 481 VDLWNALYRERVIFIGQEIDEEFSNQVLATMLYLDSLEDNKKFYMYINGPGGDLTPTLAI 540

Query: 541 YDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQ 543
           YDTM+SLK+PV+T+CVG+AYNLA FL+A GEKG+R AMPLSRIALQ+PAG+ARGQADDI+
Sbjct: 541 YDTMKSLKNPVSTYCVGFAYNLAGFLVAGGEKGSRMAMPLSRIALQAPAGAARGQADDIR 600

[Close]

BLAST of HG10009247.1 vs. ExPASy TrEMBL
Match: A0A6J1DZ88 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111024880 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 2.8e-137
Identity = 244/249 (97.99%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 295 PFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL 354
           PFGGAKPNLT EFYGKVHKSL +RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL
Sbjct: 37  PFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDL 96

Query: 355 WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT 414
           WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT
Sbjct: 97  WNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDT 156

Query: 415 MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEA 474
           MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAG+ARGQADDIQNEA
Sbjct: 157 MQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEA 216

Query: 475 NELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP 534
           NELLRIRDYL+DELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP
Sbjct: 217 NELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAP 276

Query: 535 RKDAGTGLG 544
           RKDAGTGLG
Sbjct: 277 RKDAGTGLG 285

[Close]

BLAST of HG10009247.1 vs. ExPASy TrEMBL
Match: A0A1S3ATH1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103482668 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 5.5e-133
Identity = 234/251 (93.23%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           + PFGG KPN+TAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWV
Sbjct: 35  ASPFGGVKPNITAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWV 94

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+Y
Sbjct: 95  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSRKFYMYINGPGGDLTPTMALY 154

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN
Sbjct: 155 DTMQSLNSPVATHCVGYAYNMAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 214

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYL++ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKAD
Sbjct: 215 EANELLRIRDYLFEELSKKTGQPVEKISKDLSRLKPFNAQEALDYGLIDRIARPPRIKAD 274

Query: 533 APRKDAGTGLG 544
           APRKDAGTGLG
Sbjct: 275 APRKDAGTGLG 285

[Close]

BLAST of HG10009247.1 vs. ExPASy TrEMBL
Match: A0A6P3YY14 (ATP-dependent Clp protease proteolytic subunit OS=Ziziphus jujuba OX=326968 GN=LOC107406406 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 226/251 (90.04%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           +GPFG  KPNLT EFYGKV+KSLQ R HN K +RAQF MMPIGTPRVPYRTPGEGTWQWV
Sbjct: 40  AGPFGAGKPNLTIEFYGKVNKSLQPRLHNHKPSRAQFGMMPIGTPRVPYRTPGEGTWQWV 99

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIFIGQ+IDEEFSNQILATMLYLDSI+ SKKLYMYINGPGGDLTPSMAIY
Sbjct: 100 DLWNALYRERVIFIGQHIDEEFSNQILATMLYLDSIDDSKKLYMYINGPGGDLTPSMAIY 159

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSLKSPV THCVGYAYNLAAFL+AAGEKGNRFAMPLSRIALQSPAG+ARGQADDIQN
Sbjct: 160 DTMQSLKSPVGTHCVGYAYNLAAFLVAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQN 219

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYL+++L++KTGQPVEKI KDLSRMKRFNAQEAL+YGLIDR+VRPPRIKAD
Sbjct: 220 EANELLRIRDYLFNQLAEKTGQPVEKIYKDLSRMKRFNAQEALEYGLIDRVVRPPRIKAD 279

Query: 533 APRKDAGTGLG 544
           APRKDAGTGLG
Sbjct: 280 APRKDAGTGLG 290

[Close]

BLAST of HG10009247.1 vs. ExPASy TrEMBL
Match: A0A2P5F517 (ATP-dependent Clp protease proteolytic subunit OS=Trema orientale OX=63057 GN=TorRG33x02_111670 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 2.9e-126
Identity = 226/251 (90.04%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 293 SGPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWV 352
           S  FG  KPNLTAEFYGKVHKSLQ R +N+K  RAQ  MMPIGTPRVPYRTPGEGTWQWV
Sbjct: 38  SSTFGAGKPNLTAEFYGKVHKSLQPRINNQKPTRAQVGMMPIGTPRVPYRTPGEGTWQWV 97

Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           DLWNALYRERVIF+GQNIDEEFSNQILATMLYLDS++ +KKLYMYINGPGGDLTPSMAIY
Sbjct: 98  DLWNALYRERVIFVGQNIDEEFSNQILATMLYLDSVD-NKKLYMYINGPGGDLTPSMAIY 157

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQSLKSPV THCVGYAYNLAAFLL AGEKGNR+AMPLSRIALQSPAG+ARGQADDIQN
Sbjct: 158 DTMQSLKSPVCTHCVGYAYNLAAFLLTAGEKGNRYAMPLSRIALQSPAGAARGQADDIQN 217

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKAD 532
           EANELLRIRDYL++EL+KKTGQPVEKINKDLSRMKRFNAQEAL+YGLIDRIVRPPRIKAD
Sbjct: 218 EANELLRIRDYLFNELAKKTGQPVEKINKDLSRMKRFNAQEALEYGLIDRIVRPPRIKAD 277

Query: 533 APRKDAGTGLG 544
           APRKDAGTGLG
Sbjct: 278 APRKDAGTGLG 287

[Close]

BLAST of HG10009247.1 vs. TAIR 10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2 )

HSP 1 Score: 393.7 bits (1010), Expect = 2.5e-109
Identity = 189/242 (78.10%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 302 NLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRE 361
           NL  EFYG+V+KSLQ+ T   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNALYRE
Sbjct: 40  NLNKEFYGRVYKSLQSGT--GKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRE 99

Query: 362 RVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSP 421
           RVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSP
Sbjct: 100 RVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSP 159

Query: 422 VATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIR 481
           V THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAG+ARGQADDIQNEA EL RIR
Sbjct: 160 VGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIR 219

Query: 482 DYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTG 541
           DYL++EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   G
Sbjct: 220 DYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAG 279

Query: 542 LG 544
           LG
Sbjct: 280 LG 279

[Close]

BLAST of HG10009247.1 vs. TAIR 10
Match: ATCG00670.1 (plastid-encoded CLP P )

HSP 1 Score: 169.9 bits (429), Expect = 5.8e-42
Identity = 82/193 (42.49%), Postives = 126/193 (65.28%), Query Frame = 0


Query: 332 MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS 391
           MPIG P+VP+R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL   + +
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60

Query: 392 KKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPL 451
           K LY++IN PGG +   MAIYDTMQ ++  V T C+G A ++A+F+L  G    R A P 
Sbjct: 61  KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120

Query: 452 SRIALQSPAGS-ARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFN 511
           +R+ +  PA S    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    +
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180

Query: 512 AQEALDYGLIDRI 524
           A EA  +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193

[Close]

BLAST of HG10009247.1 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-37
Identity = 115/273 (42.12%), Postives = 159/273 (58.24%), Query Frame = 0


Query: 1   MSSSSFRRRI--PAISSTKNNKTRHNLSPSPHRRTPPTNRAPSKPSIFTRCSSEP----- 60
           MS S  RR++  P  +  ++++TR     +    +   NR+ S   +F R  SEP     
Sbjct: 1   MSDSIHRRKVSNPVGNGGRSSRTRRT---AFRYVSDKNNRSKSSNKVFERSFSEPSLNRH 60

Query: 61  ------NLWTTAANRTVSSEKEGEEIVIFRPHTFSEAFASSPLLI-----PSPAPF-LEG 120
                 +L   +  R +  E+E + IV + P   SE FASSP L+      S +P   EG
Sbjct: 61  RDGQSNHLRRPSPMRGLPMEEETKPIV-YLPRIRSEVFASSPSLLNLYSPSSSSPINQEG 120

Query: 121 YKKDA-KVVINVTVEGSPGPVRAMVKLGSSVDDTIKLVVAKYGEEGRTPKLEPTDSPSSF 180
             K+A KV+I+V VEGSPGPVRAMVKL  +V++TIK+VV KY +EGRTPKL   D  S+F
Sbjct: 121 NTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKL---DRDSAF 180

Query: 181 ELHHSYFSLHSLDRREIIGEIGSRSFYLRKTHSSHGKNGGESSTASTQGSTKEIRDVALP 240
           ELH S+FS+  L++REIIGE+GSRSFY+RK     G +    S A T             
Sbjct: 181 ELHQSHFSIQCLEKREIIGELGSRSFYMRKKAPETGGSFAGISPARTS-----------L 240

Query: 241 IPPGFLLSSFIARKMGKIVRRTRKLWNFIVCLK 254
           IP   L+ S IA+ +GKI+RRTR++WN +VC++
Sbjct: 241 IPSSNLIGSCIAQLIGKIMRRTRRIWNILVCVQ 255

[Close]

BLAST of HG10009247.1 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-37
Identity = 83/204 (40.69%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 336 TPRVPYRTPGEGTWQWV-----DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIET 395
           +P  P    G+G    V      + + L++ R+I  G  +D++ +N I+A +LYLD+++ 
Sbjct: 92  SPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDP 151

Query: 396 SKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMP 455
           +K + MY+N PGG +T  MAI+DTM+ ++  V+T CVG A ++ AFLL+AG KG R+++P
Sbjct: 152 TKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLP 211

Query: 456 LSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFN 515
            SRI +  P G A+G   DI  +ANE+L  +  L   L+  TGQ +EKIN+D  R    +
Sbjct: 212 NSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMS 271

Query: 516 AQEALDYGLIDRIVRPPRIKADAP 535
           A+EA +YGLID ++  P +KA  P
Sbjct: 272 AKEAKEYGLIDGVIMNP-LKALQP 294

[Close]

BLAST of HG10009247.1 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 142.5 bits (358), Expect = 9.9e-34
Identity = 70/183 (38.25%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 353 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIY 412
           D+++ L +ER+I I   I+++ S+ ++A +LYL+S   SK ++MY+N PGG +T  +AIY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 413 DTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGSARGQADDIQN 472
           DTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P + + +  P+G   GQA DI  
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 473 EANELLRIRDYLYDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV--RPPRIK 532
              +++R+ D L +   K TGQP++ +  ++ R      +EA  +G+ID ++  RP  + 
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELV 227

Query: 533 ADA 534
            DA
Sbjct: 228 KDA 230

The following BLAST results are available for this feature:

BLAST of HG10009247.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5729899.1	3.2e-143	48.58	ATP-dependent Clp protease proteolytic subunit-related protein 2 chloroplastic [...	[more]
XP_022158384.1	5.8e-137	97.99	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_038906920.1	4.9e-136	97.21	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_008437161.1	1.1e-132	93.23	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]
XP_028762735.1	3.2e-127	90.04	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-...	[more]

BLAST of HG10009247.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ36	3.5e-108	78.10	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
Q8DJZ9	7.3e-58	55.44	ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatu...	[more]
Q8YP43	6.9e-56	53.89	Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ...	[more]
Q3MDK7	2.0e-55	53.89	ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strai...	[more]
Q5N1Q7	1.2e-52	52.06	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain AT...	[more]

BLAST of HG10009247.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J7C6Z0	1.5e-143	48.58	ATP-dependent Clp protease proteolytic subunit OS=Tripterygium wilfordii OX=4586...	[more]
A0A6J1DZ88	2.8e-137	97.99	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3ATH1	5.5e-133	93.23	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6P3YY14	1.6e-127	90.04	ATP-dependent Clp protease proteolytic subunit OS=Ziziphus jujuba OX=326968 GN=L...	[more]
A0A2P5F517	2.9e-126	90.04	ATP-dependent Clp protease proteolytic subunit OS=Trema orientale OX=63057 GN=To...	[more]

BLAST of HG10009247.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12410.1	2.5e-109	78.10	CLP protease proteolytic subunit 2	[more]
ATCG00670.1	5.8e-42	42.49	plastid-encoded CLP P	[more]
AT4G22758.1	1.5e-37	42.12	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT1G02560.1	3.3e-37	40.69	nuclear encoded CLP protease 5	[more]
AT5G23140.1	9.9e-34	38.25	nuclear-encoded CLP protease P7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 393..413 score: 47.38 coord: 424..441 score: 48.75 coord: 445..464 score: 35.62 coord: 353..368 score: 44.53 coord: 502..521 score: 43.88
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 335..527 score: 33.57618
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 353..523 e-value: 2.48103E-86 score: 262.378
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 350..525 e-value: 9.1E-64 score: 214.7
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 297..537
None	No IPR available	GENE3D	3.90.226.10		coord: 327..530 e-value: 7.3E-61 score: 207.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..211
None	No IPR available	PANTHER	PTHR10381:SF46	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC	coord: 297..537
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 346..527

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10009247	HG10009247	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10009247.1-cds	HG10009247.1-cds-Chr06:3921615..3921752	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3921982..3922077	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3922185..3922253	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3922547..3922663	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3922797..3922934	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3923284..3923404	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3924678..3924750	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3924972..3925093	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3927629..3927875	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3927964..3928174	CDS
HG10009247.1-cds	HG10009247.1-cds-Chr06:3928375..3928674	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10009247.1	HG10009247.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity