HG10005818 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATAGGGTGATTGCTTACTATGAGTGTTCCACTCTTCTTCTCTATTTGGAACTTGTCAGTTGCGCTGTATTGTTAATCGAGAAGAAGGATCTTGATGGTCAGGGTCAAGTTCTTTCAGCTGCTCTTGAGGTACTTTTTTTTGTCACAATTTTACATGTACATAAATCTGATTTCTTTCTGCTCTAGTTCTTAGATTGATCCATGGGAAACTTGGGTGTCTGATCATTGCTCTGGGAGAACCTTTCTGATTCCATGCATCATGATAGCATAAATTGCTTTTGGTAGATTGCAGAAGAGGAAAATCTGGAAGCTGATTCAAAGTTCAGGGCCTTGGTTGCCATTGGATCTCTGGTATTTTCTTACTACTACAATACTTACATTTCCTTTTACGATATTTTCGTTGAAACCCTTTTCCAGGCACATCCAATTACTTTTCTTTTGATTTGATCACTTCAAACCGTGTATCTGCTGGAAATTTTGTACCTGAACCTAAAGCATGATTGATATATCTGATGCCGCTTATGAATGTACTGTCAAATTCCAAGTAAAATTTCTGTATTTTTTTCGTAGATGCTCGAAGGGGGTGATGATATGAAAAAAACGGCACTGGACTTTGATGTAGAGAGCATTGCCCGAAAAGTGAAGACTTCTAAAGATGCCAAGATTGCTGAAGTTGGAGCTGATATTGAAATGTTGACAAAAGAAAGATGA ATGCATAGGGTGATTGCTTACTATGAGTGTTCCACTCTTCTTCTCTATTTGGAACTTGTCAGTTGCGCTGTATTGTTAATCGAGAAGAAGGATCTTGATGGTCAGGGTCAAGTTCTTTCAGCTGCTCTTGAGATTGCAGAAGAGGAAAATCTGGAAGCTGATTCAAAGTTCAGGGCCTTGGTTGCCATTGGATCTCTGATGCTCGAAGGGGGTGATGATATGAAAAAAACGGCACTGGACTTTGATGTAGAGAGCATTGCCCGAAAAGTGAAGACTTCTAAAGATGCCAAGATTGCTGAAGTTGGAGCTGATATTGAAATGTTGACAAAAGAAAGATGA ATGCATAGGGTGATTGCTTACTATGAGTGTTCCACTCTTCTTCTCTATTTGGAACTTGTCAGTTGCGCTGTATTGTTAATCGAGAAGAAGGATCTTGATGGTCAGGGTCAAGTTCTTTCAGCTGCTCTTGAGATTGCAGAAGAGGAAAATCTGGAAGCTGATTCAAAGTTCAGGGCCTTGGTTGCCATTGGATCTCTGATGCTCGAAGGGGGTGATGATATGAAAAAAACGGCACTGGACTTTGATGTAGAGAGCATTGCCCGAAAAGTGAAGACTTCTAAAGATGCCAAGATTGCTGAAGTTGGAGCTGATATTGAAATGTTGACAAAAGAAAGATGA MHRVIAYYECSTLLLYLELVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER Homology
BLAST of HG10005818 vs. NCBI nr
Match: XP_038887808.1 (phospholipase A-2-activating protein [Benincasa hispida]) HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of HG10005818 vs. NCBI nr
Match: XP_031744253.1 (phospholipase A-2-activating protein isoform X1 [Cucumis sativus] >KAE8645890.1 hypothetical protein Csa_017692 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 3.6e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. NCBI nr
Match: XP_008454875.1 (PREDICTED: phospholipase A-2-activating protein [Cucumis melo] >KAA0031249.1 phospholipase A-2-activating protein [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 3.6e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. NCBI nr
Match: TYK06700.1 (phospholipase A-2-activating protein [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 3.6e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. NCBI nr
Match: XP_022136219.1 (phospholipase A-2-activating protein [Momordica charantia] >XP_022136220.1 phospholipase A-2-activating protein [Momordica charantia]) HSP 1 Score: 151.0 bits (380), Expect = 6.2e-33 Identity = 80/92 (86.96%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of HG10005818 vs. ExPASy TrEMBL
Match: A0A5D3C5T3 (Phospholipase A-2-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00010 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. ExPASy TrEMBL
Match: A0A5A7SPK0 (Phospholipase A-2-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00010 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. ExPASy TrEMBL
Match: A0A0A0K2V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075650 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. ExPASy TrEMBL
Match: A0A1S3C0S7 (phospholipase A-2-activating protein OS=Cucumis melo OX=3656 GN=LOC103495187 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33 Identity = 80/94 (85.11%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of HG10005818 vs. ExPASy TrEMBL
Match: A0A6J1C3A1 (phospholipase A-2-activating protein OS=Momordica charantia OX=3673 GN=LOC111007968 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.0e-33 Identity = 80/92 (86.96%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of HG10005818 vs. TAIR 10
Match: AT3G18860.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 114.0 bits (284), Expect = 7.8e-26 Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of HG10005818 vs. TAIR 10
Match: AT3G18860.2 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 112.1 bits (279), Expect = 3.0e-25 Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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