HG10010578 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010578
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nuclear pore complex protein NUP62
Location	Chr06: 23585273 .. 23602483 (-)
RNA-Seq Expression	HG10010578
Synteny	HG10010578

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGTATTGCTGAAGAGGATCCTCTCTACAGCCACATTTGGAAAGGTACTTACTATAGGAAGGTTAAATTCTTCCGTTAGGAATGCAACCATTCTAGTATAAATACTATTGTCAACTTCTGGTGAGATGTCATGGGTTTCCATCTCCCCAAGTTGGCGTATTTTGTGCAAAGGAAGTTCCAAAACTGAGAAACCTTTTCATGACTTTATCGGTGGAATATCTCAGTCCTTGGTAGGTGAGAGGGTTATCGTTTTATGGGGAAACTAAGAGCTCTAAAATGGACTCTTAGGTCGTGGAATAGAGAGATTTAGAGGAGTGGATAGGGATCCTTCGGATGTTTGGTCCCTTGTTCATTATCACGTTTCTTTGTGGGCTTCGATTTCGAAGGTTTTTTGTAATTATTCTATAGGCACGATTTTGCATAGTTGGAGTCTCTTCTTGCAATGGGTGCTCCCTTTTTTTTTGTGGGCTGGTGTTTTTGTATGGGAAAGATCCTTTAATGCCTTTTTTGATTCTTTAGTTTTTTTTGGCTATCTCGGTGTAAAAAAATAAATACTCCTTTAAGAATGTTGCTACACCTTTATGTAAATATACCTTTCGTATTTTGTTAATGTGTCTGTTTCTACATAATTTGTGTTCATTCTTTGCAGGTTTCCCTTCTCTGGCTTCCTCTTCCACTGCTGCTACCACTACGTCTGGTTTCAGTGCTTCAAGTCAGAGTCAAACTTCATCAACTCTTGTTGTAGCAAGCAGTAGTAGGTATGTATATGATTCTGCTGCTTTCCTAGTAACTCTGCTATATAAGAAAAAACTTACCCGGTTTGTCTATTAATGGAGCCAGGATTATATTATTATTTTTCTGTTGATATATGATGTTCTATCATTTTTTTTTAATAAAAAACTGTTATTTTTATTATCTTTAGACTTTGGTTGAATATGGATTCTTTTCATCTTTTCTTCCGTTTGAATGTTATTTTGACAGTGAGGAAGACCATGCATTTGAGCTATTATCTATTATGTTTTCTCTGTCTTTTAAGATATTGAAACATTTATTCTCCTTGTTTCAAAGACATCTTTTTTGTCATTCTTAGAAAATATATGAAAATATATGAACTAGCATGACACATTTCTACTATATGTATGTGTATTTTTATTTATATTGAGAAGCTCTCTTAACTCATTCCATTATACATTAACACCATTTGCTTTATCCTTCATTTATGCAGTGCTACAACTTCAACTGTTAGTGCAACAGTGTCTTCTACACCAAAATTACCATCTGAGATAACAGGGAAGACTGTTGAAGAGGTATTTCTTTTTTCATAATCGGAGTTCTGCACAGTGCATTTTAGTGGCCTTATTTTATCAGACAATTAGCTATATTTATGTAACAAAAGTTTAAATTGGATCTAGAAAAGGAATCAACACATGCCTCATTAACAGAAGTCTATTCTCCTCCTCTCATATACCCTCGGTGGACACCCCTTCAAAAGGAGAAAAAGATGGTTTGGGAGAACTTTATAAGAGCCTTTTGTTGGAATTTATGGCAAGAAAGAAATAGAAAAAATTTTCAAGATAAAGAAATCCACTCTTTGGATTTTGTGATGCTATAGTTAATACGATTGTGATTTGGTGTAAATGTTCCCCCTTATTTCACCATTATAGCTTTATCATGGTCCTTTCCAATTGGAAAGGTCTTTTGTAACTTCTCTATGGGGTCTCCCCCTCCTTTTGCAATTTCATACCATCAATGATTATTTATTTTTTCCTAAAAGAAAAAAGGAATCAGCACATGCCTCATTACCAGAGATGGCATGTTTGCGTTAATTTAGTGCTGATAATCAATGTTCTAAAAAGATTTTAAACTTACGCCATGAGGCTCACCTCAAGGCAAGACTATAAGTTTTAGTCTCTAAGATTTATGCCTTCATTGGACCATGAGACTTATGCCGTTGCCTGCATGAAAATGCATTGAGGCTGAATGACTTTAATGCCTCATGTAAGGATTAAAAGAATATTATTAATTTGCTCATTCTTTAAAAAATATAAAGGTTCCTATATGTATATATAAAATGATTCCTATGTATATTGAATGTTAATACATGACTTGTGACAATTCAATTAATTACTACTTGTACTACCTAGGCTTTGGAAACAGTGATGATTTAGTTTTATAGAAAAAATTGAATCCTATTCGTGATCATAGTAACTATGTTAAGGTCCCAAGGATGTCCTTTTAGAGATTTTAGCCTTTTATTCTAGTGGAAATTAATAGGGGCTATTTTTCTGATACTTAAACCTTAGGATTAAATATATTTTTGTAATTAAATTTGAGGCTTGCACTTCATACGTACGGCTCGCCTCTTCAAGTGAAAAAGGCTTCAAGGCCACCTCGAGATGGTCATAGACTTAAGGGAACTTATCGTTGGTCCATCTGCTTTGCTTGCTTCTAGTTGGAGACTGGAGTCCTTTTGACAGAAATTTTTTGGGGAAATTTTTACAGATAGAAAAAAATATCAAACTATTTACAAAAAATAGCAAAAAAAACACTGATAGACATTGATAGACTTCTATCAGCATTTATCAGTGATAAACTTCTATCATTTCTATTACTGATAGACCCTGATAGACTTCTATCAGTCTTTATCACAACTATCTAAAAATTTTGCTATTTTGTATAAATAGTTTTTCTTATTTTTCTATTTTTAAAAGTTCCCCAATTTTTTAACTATTTTATTTATTTATTTATTGATTAATTTATTTTTTGTAATGTGGAGATCAATTAAGAAGATTTAGGTACTTCCTAGTTGGTTATGACTTATGGGTGTGGATACCTTATCTCTCACTGCTTTTCTCTACAAGCATCTTTTAATGCAAAGTTCTACGTAACTGGCGGAAGGGAAGAAGATTGGACCAAATTATTGTTAGGGTATTGGGTTTGGTAAAGGATATTAATGCTCGTCTAATTCAAGAAATAGTAATAATATAGGAAATAAATTGATGGCTTAATTACGCATCTAGTGATGAAAATGTCTTGAGTCTTCAAAAACTTATGGTGTCATTGTTTAATCCAAGAAAGTACTTTTCTTTCAGTTTAAGTTGACCTTAGTTCAAATAAAATTACTTTGTTCAAAATATTCATGCAAGTCACGTTCTTGCATTCATTATTCATTGAATCCTCATACAACGTGTTTCCAACATTGTTTAGTCTTTTTTATCTATTTTGGTAATGCAATTGTTTTTATTTTATGCTTCTTTCTTTTTTCTTCAATTTCATTATAGATCATAAAGGAATGGAATGCGGAGCTTCAAGAGCGTACTGGAAAGTTTCGGAAGCAGGCCAATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATCCTCCTTAGACTTGAGGTGTTACGGCACATAATTTCAAGATTTTTAAGCCTTCAATGTGATGTGAAATTTAATTGGCTATCATATCTGTTCTAACAAAACATGTGCAAATGATTATAAAAAAGATTATAAAAAAAGATAATTCTAGTTAATAAATTTTTAGATAATCTATTTGAGATCGGTACTAGTCACCCCGTGTCTTCCATAGGGTCCTAATTTGCAGGGGATGAGCTCTTAGCATATTTGGTAGGAAGTCTTTAATTTAAGTGTTCACATCCCTTTGTTTTTCTTCCTTGCTTTTTTTGGACACTGCTCAGTTCAATTTTACCTCGATGTTTCTTTTCCCAACTGATTCTAATTTTTATTTTTTAAATGGTCATTTAAAGAATTGAAAATCTGCAACAGAGTAACTAGCCAAAGGAGCTAATGAAAAGGGAGGCCAATCAGCATAAATGAGGAAAAAGAAATAATTACAAGTATTTTTTGATAGGATAGACCACCATGAAAGTAACATAAATGACTAGATATAAAAGAATTACAAACTCACCATCTCTCTTCCTAATTTCTTTTGTCCTTCATCATCATCATCTTCTTCTTCTTCATCTTTTTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGGGTAAAAAGGGTTAAAAAAGTGAAGGAATATTTTTCAAAATCTTAGATGTGAAAGGAGGCATCAAAGTACACACTGGACCTCTTTGTATCTCAAGGATTCACTTATTATTATTTTTTTCTTTTCTTCCTCAATCAAATTGGTTATCTTGAACTCTTTATTATGTATTTATTTTTATTTAGAAGTTGTCTCTTTCCTTCTTGGTGAGAAACAAATATTTATGGATAAGATGAAATATACGAAAGAAAGTGGAAGCCCATAGTGGAAAGAGGGTTCTCTCTATCTAAATGTTAAAAAAAGAATAATGTATTAGATAGATTGATTGCTAGGCTGCTCTAATGCATTTATTTTGAATTTAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGTTGGAGAAGAAATTGGAGCTGATCGAAACTCACCAACAAGAGGTATTCACTTGTGGTCTTGTGTGCCTTTTTCCTTCAATACTTGCCTTTAGGTAGACATTTTACCTATGGCCTTGTGTACCTTACCCCTATCTATATTATTTTTGGTTTCGATTAAATCATCATTTAGGACGTTGTTAAGATTCGAGTCATAGTGGAATTCATTTTCAATTAAATTTTTAGGAGATCATTGAACAAATGTGAAACTACAGCCAGACGTTGATGTCCTATAAACATAACATGGTATGCTAAATGTTTAAGTGTTGATATAATATTAAATTTATCTTCACCCATCATCTTAAGCTTTTGGGTCGATTAATGATTTAACATGTTATCAGAGAAGCATGTCTAGGGGGAGGCTTATGAGGTACTGTGTTCAAACCCATGCAATATTAGGAATTAATATTGATTTCCACTTGTTGGTGAACACCCTAGGTCACAGCTAGAGACTATCTTCCTTTGTGTTGCATTGCAATGGTGTGTTCTTTGCAAGCTGCAGGAGGAGGATATTGATAATTTATTATGAGATTGTTTGTATGCTTATTCCCTCTAGGTTTCTTACCCCCATAAAGAAAAGAAACAAAAAGTGCTCTCATCTTCTCGTTCTTTTCCTTTCTCCCTTTGCTACCCATGATTTTCTCCTTTCAAACTGTTCATCCTCCCACTCACCATAGAAGGAAGAGAGAGAATGTGAAATAAATCGAAGCCACAAGAACAATAAAAATGCAATTGAAACTAATGGCAAGGAGATATAGATGATGGAAATGGTAGAAAAGAATGGTGGCATTGGAGTTCTCCACAGAAAAGGAGAAAAAGAGAAAGAAAGGTGACTCAAAGATGGAGGAATTAGAGGAGAATGGTCACAAAGAAAATGGAGGGAAGAAGAGACACTTGATAGATCGTGGCCATGGCCGACAATGAAGGGTGAGATGGTGGGAGACAAGGACTTGGTCGAAGTGGAAACGCCAATCAAAGGAGGCGGAAGCAACAAAGGAAAGGAGAAAAGCAATACCGAAGAGAAAGTGAGGTGGCAGATAGATGAAGAAAGATGGGGAATTTCTTATTGACAGTGAACGGTGGTGAAGGAAATAGAAGAAAGTTTGCAAGACCATGCAACGTGAAGAGTGGACCTCTGTTGACTACCCTGAAGGAGATACAATCGATGAAAATAGAAGAAAAGATTCAATGGAGTAGTGGTGTTGGAAGGCTGTCCATGTACTTTGGTCGAGCGCTCCTCTCGAACATCTTGGTTCACTATTTTTTTTGGCATTTAGAGCAATGGAAGTGATGCGGAGGTTATGTGGCAGAGAGAAACAACTAGATGACCAGATGGGGGTTGGCAAACTGTGGATTTGCGGCGAAGATGCAATCAAGGCTGCAAGTATCCACGAAGGAGTTGCTAGAATTAAAAAACAAAAAGATGCAAAGGAAGGTGGGTGGTAGTAAACAAAGAAGAAGGCTATGGAGCGTGGTAGTTTTTGTGAAGGGGTGGGAAAACAAAGTCCCTTACCAAATCCTGCGTGAAGTGTTAGTAGTTGGGGTCAGCCACCGGAATATGTGGAGGAAAAAGATTGGTTTGATTGATGGGTTGGAGTTGCATGAAAAATCCCATTATGCAAGTGGTTTATGGGCTGGATTCAAACGAATTAATTGAAACCCATTTTCTTTCTAAGGCTGAAGAGAAGGTAGGGGGTTTTGTGGTAGAAGAGAAGTTTGTGCAGCAAAAAAAGAAAAAAAGAAAAAGAAAAAGTATGATTGTTATCTTTTTCTTAGTATTTGTAATGGTTATGATACAACCCACACCTTCAAGACAAGGTGTGTTTTCAAGGGCCGAGTAGTTTGAGAGCCCTAGTTAGAGATATATTAAGATATATATTTTTTTTCAAACAAGAGATATATTAAGATTAATAGTAGGATAATAGCGAGGGCATAAGAGAAATTAGCTCGTGGTGTCTTGGTTATAAATATAGTGTGTTCGGGACCTTAGAGGGGGTGGTGGATCATTTTAGTATGAATTTTCCTTGCGGAAATTTAGGAGAGAGTAGCCTTCTCAAAAGTTTATGATATATTATAACTTCTTTTCATATTGCAATATACATTTCTATCTTTTAGTGTATTTTGCGTTTTATGTTGTTCTTGAGTGTTTGTGTTAGGTGGTAAAATAACACTCTCTTCCTCGTGCCTTTGCATACTTGAAGGAAGGGTACCACCAAGCATACATTAGACAAATTCACTGTCTAGGGACTAAACATACTAATGTTTAAGTGCTGCATTGTCATAATTTTATACTATAGGGTCTACATTGTTATACTAAACTTCAGAGACTAAATTATAACTTCAATGGAAGTTCAAAGACCAAATGTGAGTTCTATCCTAAAATACATGAAGTGAGCATAAGGAAAGTTGTAGAAAGGTGAGTCCCATAGGTTCTTCCTATAACCTCATGTCTCATAATTTGAGCCAAAATATTGGGAAAATAGCGCCTAATGTTGACTTGACTTGTCTTATTTGTGCTTTTTATTAACAAAGCGTGCTTTAAGGTTGGCAAGTTCTTATAGCTTAATTGGAAGTGAGTTCAGACCATGAAAATTATTGAGAAATTTTGAATTGCACATATTTTCATTATGTTTAATAAATCAATTGGATTTATCTATTCAATTATCAGGTTGATAAGGCATTGCAAAGTGTGGAAGAAGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAAGCTGCATCTACGAGGGATGGAATGTGAGTTGATAGCTGTTATGTTAATTATGTTAATTACATGTTCTAGGGTACAATGTTTTATATTTAAGATATTCTTTTTGGTTTGATCTTTATGTTTGTTTGTAACAAGAAACTTTTCATAGAGAGAATAAAAATAGACTAACGTTAGAAAGATACAAACTCTAGATGAGGAGTTTATTAAATGTGGCTAATTGTTTGGATCTGAAAAAAAGTTGGTATTCAATTCATAAATTGATAAGATCTTGCTAAGTGGCGATAATTTAACACTAGTCTTTAGAACTTGGCAGTGGGCTATTTGGCAAGTTATCATCTTTCATGTTTGATGGGGAGAGAAGCTCAAGATGAAATGTACCTGTTTGAATTTAGATTGAGGAACATATGACAATTTTTTGTAGTTTTAAGTAATTTTCAACTTATTGGACAATGCTTTTCCCTTTCTCATAGATAAACTTAATTGGATAATAGAAACTCAAAGGGAGGGATGATGATGGAACACACTTTCTAATAGGACTACAAAATAGTAGATCTTCAAAGGAAGTCTAAAAGGAAAGGGACGCTGGTGCTAGGCCGACCCACTCGAAGACCTGGAAAGGAGATTAGTAATGAGAAAAAGGGCATGGCCCACTCTCAGGGGACTGAAGAAACTAAGGAGGTTTTGGGCTAGGTTGGTGAATAGGGGTCAGATCCCTTACCCGAACCAAGGAGAAATGGATTACGAACCGTCCAACCTGTCCATCGTGAGCTATTCAGACGACGATTCCTTCCTCTCTTCTCCTTTCGTTCTTGAGCGTAGTCCACCAACGGTGGGAGATCTGTTTCTTGAGAAAGAAGGCAATCAACTGGTTCACTTGTTGGGAGGTGAAGGAGAAGTTAACAGCGCAATCCCATTGGAACTGGACCATGGTGGTCTTCAAAGCTTCGTAGAGGCAGAGGGTGGGCACAGGTTGAATCCAATTACCAACAGAGTCTCATTTGGGTCTTCTGTCGAGGCAAGAAGCTGGTTTAGCAGGTTTTGGCAGTTGGATCAACCGACCATGTATGTGTTCCTTCCCTTTCTTTGGATCTTATTCCTCCGAAGTGTGTGAGGGTATCAGAGGAGGAGGGGGAGACTTCTATTCACTGTGAGGTTGGAACCAATGCCTTTGGTTATGGGTGAGTCGTTTGGGTTGGTTGTGGGAGGGAGAGGTGTGTCCCTCATCTGAACCTTCTATGAATCCTTTCCATAATGTCGGTGGTGCTAATTCCTTAATGTCAGTCTATTCTTTAGGTGAAGGGAGTTTAGAGGTTGCTACTTGGTCTAATGCTTTGGGTGTTGGGGTTGGGGGAGGTTCTTTGCTTTTTGTCTAATAGGGTTTTGTTAGGGGATCCTTACGCCCTTTGTAATCCCCTTTTGGTTACCTATCCAATGCCAAGAGGAGAGTATTATGGTAGTTGGCCTTTTGGATGGGGTGCATTGGCGCCAGTGGGAGTTAAGAGGGTGGAAGCCGAGGCTCCTAAACCAGCCTCGTCTTCACAAAGTAAAATTGAAGTACGGAGGAAGTAATAAGGTTGAGAGAGTTGTGGAAGCTCAAAAGTTTGGTTAACTATAAGAGAAAGAAGGCTTTCAAGGAAGTGGGTATCGTCATGTCTCAATGTTGAAAGAAGTTGGGGGGGGGGGGGGGGGAGGCGTGAGAAGAGAAGATTAATTAAGGAAGTGTTGAGGCAAGAGAATCCTGATATTGTGGTCCTGATGGAGACAAAACGAATTGAGTTTGATCTTCAATTCATAGGTAGTGTTTGGAAGTTCAGAAGGGTGGGGTGGGAGAGTATTGATTTAGTGGGGAAGTCAAGGAAAGATTAAGGGAGTCTTCTCGCTGTCACTTTCGTTCACATGGATAGATGGTGAGAGTATTCGGGTGACGGGAGTGTATGGCCCCCTAAGAGTTAGAGGAAGAGATCAGTTCTTGAACGAGTTGGGAGACCTTTTTGACCTTTGTGGTTCGAAGTGGGGACGTGTGGGCGATTTTAATATTACTCGTTCTCAAGTCGAGAGGGTCCTGCAAGGGAGAAGTAATAGATCGATGTGGAGATTTAATGACTTTATAGAGGGGTCAAGTGGGTTGATCCTCCTCTTTTGAATGGTAAGTTTACCTGGACCAATAGTAGAGCGCGAAGTAGGGTTGACAAGTGTTTGTTGTCTTTGGATTGGATTAAGCTGTTTGGGGAGTTTCAGCAGGTTGTGGGGTCGAGAGTCACTTTGGATCACTGTCCTATCATCCTTACGGGTGTCAGAAGTGGGGGCCAGACCATTTTAGATTTGAGAATATATGGCTCCAACACCCTTCTTTTAAGTCCCATTTTCCTAGTTGGTGGAATGCTTCAGTGTAGGGAAAATGGGAAGGTTATCGCTTTATGGGTAAGTCGAGGGCTGTGCAAGGGAAGCTAAGGATATGGAATAGGGAGGTCTTTGGTGATATTAAATTACAGAAGCAAGAGTTATTGGTTAAGATCAAGGGGTTAGATGATTTGGAGTTGGAGGGCCTCCTGGATGACTCTTCGAAGGCGGAAAGGGAGTCCCTTAAGATCCTTTTTGCCGAAGTGGTGACGAAGGAAACTTGTAGTTGGAGACAAAAAGTGAAGGTGGCAGGGCTAAGGATGGTGATTGCAATACCTCTCTTTCCATAGAGTGGCCAGGGGGAGGAAGAGCAGTAATAGGATAGAGCCTCTGGTTAATGATTCAAGGGAGACTATTTGTGACGAGAAGAAAATCAAAGAAGACATTATTATGTTCTTCTCTAAGCTATATGGTCCAGAGGTTACTGCTAAATCCATTGTCCAAGGGGTGGATTGGAGCCCCTCATCTTTGAGGGAGAAACAGATGCTTTGTCTGTTCCTTTCTCTAAGGAGGAGATTAAAGTGGCTTTATTTGGGTATGACAACTCTAAATCCCCAGGTTCGGATGGGTTTTCTTTGGCTTTTTATCAAGACAATTGGGCTCTGATCAAGGAGGATCTAGTCAATGTTTTCCAAGAATTTTATGAAAGGGGAATCCTAAATAATTCCATTTTTGAAACTTTCGTTTGTCTAATTTTGAAAAAGGAGAATGTGACTAGGGTAAAGGATTTTAGACCGATAAGCCTTGTAATGAGTGTAGAAGATCATAGCAAAAATGTTGGTTAATCGGCTGAAGAGGGTGCTCCTGTCAACTATCATGGACTTGCAAGGGGCTTTTGTGGTTGGGAGACAAATCCTGGATCAAGTCCTTATTTCTAATGAGGTGATTGAGGATTATAAATCAAGGAAGAAGGAAGGAGTGCTATTTAAGATTGATTTTGAAAAAGCCTACCATCACGTGAATTGGAACTTTTTGGATAAGGTGTTGAAGAGGAAAGGTTTTGGGTATAAGTGGCGGATGTAGAGGTGGGGCTGTCTGAGAAACGTGAGCTACTCTTTTCTAATTAATGGGTGTCCTAGGGGCAAAGTGGTGGCGTCTAGAGGTCTCCGTCAGGGAGACTCTCTCTCCCCCTTTCTTTTCTTTCTAGTTGTTGACGTCCTTTGTAGAATTGTGAGTAAATGTTTTGATGGAAGGTCATCGAGCCTTTTGAGGTGGGAAAGGAAAGGGTGACCCTTTCCCATCTTCAATTTGCTGATGACACTCTCTTCTTCTGCTCTGGTAAGGACAACTCGTTTTTTATGCTGAATCATGTTCTTGCCTTTTTTGAATAGATGTCAGGGTTGAAAATAAACAGGGGGAATTGTAGTGTTTTGGGCATAGACTATGATGGTGAAAAGCTTAGAAGATGGGTTGCCTGGGTCGGGTGTGATGTTGGGAGTATCCCTTCCTCGTACCTTGGCCTCCCTCTTGAAAGCAATCCAAAGTCTGTTTGTTTTTGGGATTCTGTGGTGGATAAAGGCCGAAGCAGACTAGCTTTGTGGAAAAAAAAGCTTCTTTTCTAAAGCTGGTAGGCTTACCCTGATCAAGTTTGTCTTGAGTGGCATTCCAATTTATTTCTATTCCCTTTCAGGCCCCTTGTGAAGTTTGAAAGTGTTTGGAGAGGTTGATGTGTGACTTCCTCTAGGAAGAGATTGATGAAGGAAAAGGCAAAAGTTCACAGTTGATTAGGTGGGAGGTTGTTGAGAGCCTGTGCTTTTAGGAGGTTTGGATATTGGGAACCTAAGGATACATAACAAAGGCCCTTTAGCCAAATGGTTGTGACGCTTTTCCTTTGAGCCCAACTCTCTATAGTGTAGGACCATTGCTATACACATGGTCCCCATCCTTTCGAGTGGCTATCTAAAGGGATTAAATGCACCCATAGGAATCTGTGGAAAGATATCTCCAAAGAGCTCCCTTCTTCGTTCTTGGTTCTGTGTGTGGTGGGGGAGGGGAGGTACTTGTTGTTGGGAAGATCACTACGTAGGGGAGAGACCTCTTTGTGGGTTGATCCCCCAACTGTATCATTTGTTATCCCTCAAAAATCATTTTGTTGCCAACTTTCTTGTGTAGTTTGAGAGCTTTTGTTCCTTCTCCTTCGGGTTTCATTACTCTCTTTCCGATAGAGAAATGACGGAGGTGGTTGCTCTTCTCTCTTTACTTGAGAGTCATCCCTTTAGAGTTGGGAGAAGGGATGTCATAGTTTGGAGCCCCAATCGTTTGGAAAGGTTCTCGTACAAATCTTTCTTTCATTGTCTGGTTGATCCTTCTCCTTTAGGTGTTTCGGTCTTTTTGGTGCTCTGGAGGATTAAGATCCTTTGAAAGGTGAGATTCTTAACTTGGCAGGTTCTTCATGGTCGTGTAAGCATGTTGGACAGGCTTGTTAGGAAGCTGCCTTTGCTGGTTGGGCATTTTTGCTGTATTCTTTGTTGGAAGGCAGAGGAAGACTTGAACCATATTCTCTGGCGTTGTGACTTTGCGAGTGGTGTCTGAGATTCTTTTTTCCAGGTGTTTGGTTTGATGTATGCTCATCATAGAGATGTCAGGACTATGATCGAGGAGTTCCTCCTCAATCTGCTGTTCGGGGAGAAAGGCCAGTTTCTTTGGCTCGCCAGTGTGTGCGCGATTTTATGGGTTTTGTGGAGAGAGAGGAACAACAAGGTTTTTAGGGGTATTAAGAAGGATTCTAGGGAGTTATGGTCCCTTGTTCGCTTTCATGTTTCCCAGTGGGTTTCGATTCAAATTTTTTTTTGTAATTATTCTATAGGCATGATTTTGTATAGTAGAAATCCTTTCTTGTAAAGGGAGTCCTCCCCATTTTTGTGGGCTTGATTTTTTGTATGACCGTGTATTTTTTCAATTTTTTCTCGATGAAAGTGGTTGTTTTTATCCCAAAAAAAAAAAAAGAATAGATCTTCACTTTATTGTTAGAACCCACTTCCAATTTGGATGTTCTTAGCAAAGTGTTAATTGGTGTCAACAAGGGTCTAAATAAGGGTTTCCATGTATATCAAGAGAGTTCATTTGTTTTGTCTTTAATTTGTGAATAATAGGATCTTTCTTAAGACACAATAGTTATAAGAAATTTTCAGACAATGCTTTGCCCTTGCTCATAGATAAACTTAATTGGATAAGAAAAACTCAAACGGAGGGTTGATGATGGACACTTTCAAATAGGACTACAAAATAGATCTTCACCTTTCTGTTAGAAACCACTTCCAATTTGGATATTCTTAGCCGTGTTAATTGGTGTCAACAAGGGTTTCCTTGTATATCAAGAGAGTTCTTTTTTTCTTTCTTTTTCATTTTTTTTGTCGTTTACTTGTGAATAATAGAATCCTCTTTTCTTCAGGCATGGAAGATTATTTATTAATTTCAACGTCATTATAATATTGTTTGAAATTATTTTGACAGGACCTGCGCCCTTGCCTTCTGTATGAATACTAGTTGTGAGGCTCCTAAGCTTTAATGGTCTTCCTTTAACAGTATGGAAGCCTAGTATCATTGTTTTATCCATCAGGGTTTTCCTTTAGGAAGTCGTTCTAATTGGTCAATTTTTGGTGCCTCTTCTCATTGGAGGAAGACTTAATTCTCTATGGTCTCGAGGTGGATACCTATCTAGTCAACTCCGAGTGGGATTCACAAATGTATGTCATCTTTATTTAGGATTTCTTCTTGCGTGCAAAGGTAGAAAAGCCACAAGGAATCATTATGGGAGAGCGTCTAAAAGGGTGGAGGATCTCATCTGGTTAGGTGGGAGCTCGTGTACTGGCTCTTTATCCGTTGTGGGTTAGGCATAGTGAATTTGGGACTTTTTCACAAGGCCTTTTTTTGCAAAAATGTTATGGCGGTTTTCTTTGGAAGTCAAAGCTTTATGGCATAGGATCATGGTTGACAAGCACCATGTCTACCCTAAGGAGTGGGTTCAAAAGGCACTATCAAAGCTCCTTCCTCAGTCATCAATTGCCTTGAAAAGATGGTTCGTGACTTTTTTTTGGGAAGGTGCTCGCGGGGATGGTGGTATGCATAATGTGAATTGGGGGATCACTCAGCGCCCTCAAGCATTGGGAGGTCTTGGTATTGGAAATTTTAAACACCGTAATTCCTCCCTTCTTGCAAAGTGGACTTGGCGATTTCTATCGGAGCGGAATGCTTTATGGCGAACATTTATTGTGGCCAAATATTATCCTATTGATTGTATATGGTCTACATTTGTCTCCCGTGTTTCTGCAAAAGCTCCTTGGAGGTATATTTGCCAATACATTGATTTGGTTGCTAATCGTATCCTTCGTAGGATTGATGATGGTACTACTACCTCTTTTTGGAATGATCCTTGGCATAATTGTGGTATCCTCTCAACTGCGTTTCCTAGACTTTTTCGCCTTGCCCGACAGCCGGATTGTACTGTGGCTAATGCGTGGATTGCCTCCTCTAGCGCTTGGAACTTAAATCTTCGGCACAATCTTACTGAGTTGGAAATTGCAGAATGGGCTACTTTATCATCACACTTGACTCAAGTCAGTTTGCGCCCCTCTCCTGATTCTTGGATTTGGCCTCTGGATTCTTCTGACTTTTACAGTTAAATCTCTTATGAATAATTTGGTGGGAGCTACTGATTCTGCTTTATCTGATCTGCATGCGTTGATTTGGAAAGACCACTATCCTAAGAAGACTAAAATTTTCCTTTGGGAGCTTAGTTGGGGCGCCATTAACACTGTGGATCGTTTGCAGCGACGATATCCTTGTATGTGTATTTCTCCCTCTTGGTGCATCATGTGTCGAAATCATGTTGAATCCCCTATTCACTTGTTCCTGCAATGTCCATTTGCTGCCAATTTTTGGGATCTTGTTTTGTCCACTTTTGGGTGGTCCTACACCTGTCCTAATTCCATAATTGATGCACTGGCTTCTTTATTGGTGGGTCATCCTTTTGGTGGTACAAAAGCGATCGTTTGGTTGGCTCCTGTGCGTGCTTTTTTCTGGAGGTTGTGGAGCGAACGAAACAGTCGGCTTTTCAACGACTCCTTTACCCCCTTCAACCGTTTTATGGAATCTGTTTTGTTTACTGCTTTCTCTTGGTGTAAAATTAAACACCCTTTTATTCATTTCAGCTTATCTTTTTTAGTCAGTAATTGACATTCTTTGATGTAATCACCTCTTGGTGCTTGGGGTTTTCCTCCTCTTTCATTGATCAATGAAATTGTTTCTTTTTACAAAGAAAAAAAAAAAAAACAAAAGGCACTATCATGAACATATGGAAAACCGTTGCTTTTGGGTAAAGAAATGTCTTTCTCTAACTTTTGAGTTTCTCTATTGGAGATGGGTTGTTGATTCGTGTATGGAAGGATTGTTTGATAAAGCCCCAATTGTCTTTTTCCCTCGTCTTTAGTTTACTATTGATCCTTCACTTTGGGAGGATTAACTAAAGGTGTATGCACTAAAGTAGAAGATCAATTGGCTCCCACAAACCTTTTTCGAGTAGGGAACTTAATCAAGAATTGAGTTAGAACTTTTTATTTTTATGGATGAATTAGAAGGTTCTTCTAATAATTCCACGACAGATTGATTTTCTGGCATTGTACCGAAGGTTCAAATTTCAATCTCTTGTTGCAGGTATGAGCAAGCTGAATATATAGAGCGGGAACTAGAGCAGATGACGGAACAGATCAAATCAATTATCCAGACCCTAAATGCAAACCAGGTAAAGGATAACAGCTAAATGATTCAATTCTTGCCTTGAACTTTCCTGTACGTGGTAATGGATGCATCATATATCTACTTATTTATTTTATCTAGGGAGGAGAACTTGATGTGATTGATGGGATGACACCGTTAGATGCAGTTGTTCGAATTTTAAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGTTAGTGTTGCTTATATACATTCTTTATCCATATGTAAAACTTCTTCGATCCATGATGACCATTGTAAAATAGCTTCCTAAGTATAAAAACATTTAATTATTCTCTATGTTATTAGACCTTCATCAGACTGCATAACTTAAGTCTATGAGTAATGGTAAATTTAATTATATCAATACTTCAACACTCTCCCTTACTTGTAGGCTTGAAAATTTGTAGAAGACCCAACAAATGGAAATCACTATTATTGGGGTGGAAATCAATATTACAGGAGTTTGAACATAGGACCTCTAGCTTTGATGCCATATTAAATCACTAATTGACCCAAAATCTTATGTTTGTGGGTTATGATAAATTTAATTATATCAATACTTCAACATCATAATTTATTGAAATCAAGAAAAATAGCGCTTTCCAATCCATAAACAATTTTTTTGTATAGTATGCACAAAAACTTAGAGAGCCTAAAAGCAAGGGGGAAGAGAGATCCCCCCCCTCCCAAAACAAACAAACACACACACACACAAGATGGACAAAACAACTATAAGTGGGCGTTTGAGGCCATGAGTGAAATTGTGAAGTCTACGGAGTTATTTAGTCGTGGACCCATAGTGTAAGGATATAATAAGTAGTTGGGGGGCCACAAACTCCTTAGACAAACAAGGAGGAGAGTTGGTAACTCCACTTCTCCAGCTCCAACTCCTTGAGCCAAACACCCCATAGGAGAGCTTTTCGTTCAACATGGATAAGCTGTAATTACAAAATAATTTCCTGTTTTTAGTGCACCACCAAGAAACTAAGAATTGTATGTTGCTACACAAATTAACGAAAGAAGACTTATCCTCAAAACTACAACGATTTCTTTCCAGCCAATTGTTCCAAATTAGAGCTCCGACTGCAATGGACCGAATGACTTTGCCTCTGTTTATGAAATTTACCAAGGATCTCAATCAACCAGTCAACTTTAGGACCAGGGATCTTTCAGTGAGCTTCAAAAATACTGACTTAGAAGTGAACAGGCCAGAGTATTTCAGAGTCCAAACAGCTTCATCCTTCCCCGGCCACAAGTAAATTGATCAAGAGTGGAAAAAGAGAGCTGGTTAATTTTGTGCGTGGAAGAAGAGATGCGATTTTGTGTGAAACAATTGAGCTAATTAGTTTTTTGAAAATGGAAAGCTATTTGCTGACCTCTACATTAGTCAAATTCGTCTTGAGAGTTGGTGTTTTCAAAACGCAAAGTGCATGTCAAGGTGACAAAAAAACGAGGCTTGAGTGAAATGAGATACAATATAAATAAATCAATAATATATATAAAGCTATATTTTTAGGACGAATGTAAAGAATAGGTAGACATAGGAAATGTTTTTTTTATTTCTGAGATACATAGGAAATCTATGTAAGGGTGGTCATATATTCCTGGTAATTGTACCTCTCTGAATAGTCTTAATAGCATAGCCTACCATGGAAAAATGCCTTTAAATCCATTAGGATCATAGTTTTATTTTAGTTTTCATTACTGCATTGAGTTCTAACATTAAGCTTTGTCAGGCCGAAGAGTTTTCTTCACGTATTCAGAAGCTTGCTGCTACCGAGGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTCTGGATGTCTTGA

mRNA sequence

ATGAATGGTATTGCTGAAGAGGATCCTCTCTACAGCCACATTTGGAAAGGTTTCCCTTCTCTGGCTTCCTCTTCCACTGCTGCTACCACTACGTCTGGTTTCAGTGCTTCAAGTCAGAGTCAAACTTCATCAACTCTTGTTGTAGCAAGCAGTAGTAGTGCTACAACTTCAACTGTTAGTGCAACAGTGTCTTCTACACCAAAATTACCATCTGAGATAACAGGGAAGACTGTTGAAGAGATCATAAAGGAATGGAATGCGGAGCTTCAAGAGCGTACTGGAAAGTTTCGGAAGCAGGCCAATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATCCTCCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGTTGGAGAAGAAATTGGAGCTGATCGAAACTCACCAACAAGAGGTTGATAAGGCATTGCAAAGTGTGGAAGAAGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAAGCTGCATCTACGAGGGATGGAATGGGACTGAAGAAACTAAGGAGGTTTTGGGCTAGGTTGGTGAATAGGGGTCAGATCCCTTACCCGAACCAAGGAGAAATGGATTACGAACCGTCCAACCTGTCCATCGTGAGCTATTCAGACGACGATTCCTTCCTCTCTTCTCCTTTCGTTCTTGAGCGTAGTCCACCAACGGTGGGAGATCTGTTTCTTGAGAAAGAAGGCAATCAACTGGTTCACTTGTTGGGAGGTGAAGGAGAAGTTAACAGCGCAATCCCATTGGAACTGGACCATGGTGGTCTTCAAAGCTTCGTAGAGGCAGAGGGTGGGCACAGGTTGAATCCAATTACCAACAGAGTCTCATTTGGGTCTTCTGTCGAGGCAAGAAGCTGGTTTAGCAGGTTTTGGCAGTTGGATCAACCGACCATGTATGAGCAAGCTGAATATATAGAGCGGGAACTAGAGCAGATGACGGAACAGATCAAATCAATTATCCAGACCCTAAATGCAAACCAGGGAGGAGAACTTGATGTGATTGATGGGATGACACCGTTAGATGCAGTTGTTCGAATTTTAAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTTTTCTTCACGTATTCAGAAGCTTGCTGCTACCGAGGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTCTGGATGTCTTGA

Coding sequence (CDS)

ATGAATGGTATTGCTGAAGAGGATCCTCTCTACAGCCACATTTGGAAAGGTTTCCCTTCTCTGGCTTCCTCTTCCACTGCTGCTACCACTACGTCTGGTTTCAGTGCTTCAAGTCAGAGTCAAACTTCATCAACTCTTGTTGTAGCAAGCAGTAGTAGTGCTACAACTTCAACTGTTAGTGCAACAGTGTCTTCTACACCAAAATTACCATCTGAGATAACAGGGAAGACTGTTGAAGAGATCATAAAGGAATGGAATGCGGAGCTTCAAGAGCGTACTGGAAAGTTTCGGAAGCAGGCCAATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATCCTCCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGTTGGAGAAGAAATTGGAGCTGATCGAAACTCACCAACAAGAGGTTGATAAGGCATTGCAAAGTGTGGAAGAAGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAAGCTGCATCTACGAGGGATGGAATGGGACTGAAGAAACTAAGGAGGTTTTGGGCTAGGTTGGTGAATAGGGGTCAGATCCCTTACCCGAACCAAGGAGAAATGGATTACGAACCGTCCAACCTGTCCATCGTGAGCTATTCAGACGACGATTCCTTCCTCTCTTCTCCTTTCGTTCTTGAGCGTAGTCCACCAACGGTGGGAGATCTGTTTCTTGAGAAAGAAGGCAATCAACTGGTTCACTTGTTGGGAGGTGAAGGAGAAGTTAACAGCGCAATCCCATTGGAACTGGACCATGGTGGTCTTCAAAGCTTCGTAGAGGCAGAGGGTGGGCACAGGTTGAATCCAATTACCAACAGAGTCTCATTTGGGTCTTCTGTCGAGGCAAGAAGCTGGTTTAGCAGGTTTTGGCAGTTGGATCAACCGACCATGTATGAGCAAGCTGAATATATAGAGCGGGAACTAGAGCAGATGACGGAACAGATCAAATCAATTATCCAGACCCTAAATGCAAACCAGGGAGGAGAACTTGATGTGATTGATGGGATGACACCGTTAGATGCAGTTGTTCGAATTTTAAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTTTTCTTCACGTATTCAGAAGCTTGCTGCTACCGAGGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTCTGGATGTCTTGA

Protein sequence

MNGIAEEDPLYSHIWKGFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVNRGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLLGGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPTMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

Homology

[Close]

BLAST of HG10010578 vs. NCBI nr
Match: XP_008459731.1 (PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 3.1e-106
Identity = 253/394 (64.21%), Postives = 255/394 (64.72%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 503 GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 562

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 563 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 622

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRD                
Sbjct: 623 KLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRD---------------- 682

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 683 ------------------------------------------------------------ 742

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 743 -----------------------------------------------------------A 761

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 803 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 761

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Sbjct: 863 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 761

[Close]

BLAST of HG10010578 vs. NCBI nr
Match: TYK24755.1 (nuclear pore complex protein NUP62 [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 3.1e-106
Identity = 253/394 (64.21%), Postives = 255/394 (64.72%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 88  GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 147

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 148 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 207

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRD                
Sbjct: 208 KLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRD---------------- 267

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 268 ------------------------------------------------------------ 327

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 328 -----------------------------------------------------------A 346

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 388 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 346

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Sbjct: 448 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 346

[Close]

BLAST of HG10010578 vs. NCBI nr
Match: XP_031743587.1 (nuclear pore complex protein NUP62 [Cucumis sativus] >KGN46560.2 hypothetical protein Csa_005518 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 6.9e-106
Identity = 253/394 (64.21%), Postives = 254/394 (64.47%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 499 GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 558

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 559 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 618

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 619 KLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAASTRD---------------- 678

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 679 ------------------------------------------------------------ 738

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 739 -----------------------------------------------------------A 757

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 799 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 757

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQK WMS
Sbjct: 859 DEKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 757

[Close]

BLAST of HG10010578 vs. NCBI nr
Match: XP_038874708.1 (nuclear pore complex protein NUP62 [Benincasa hispida])

HSP 1 Score: 394.0 bits (1011), Expect = 1.5e-105
Identity = 251/394 (63.71%), Postives = 254/394 (64.47%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSL S+ T ATTTSGFSASSQSQTSSTLVVASSSS TTSTV+ATVSSTPKLPSEITGK
Sbjct: 455 GFPSLTSAPTPATTTSGFSASSQSQTSSTLVVASSSSGTTSTVNATVSSTPKLPSEITGK 514

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVE+QAELEK
Sbjct: 515 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVESQAELEK 574

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 575 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD---------------- 634

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 635 ------------------------------------------------------------ 694

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 695 -----------------------------------------------------------A 713

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 755 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 713

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Sbjct: 815 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 713

[Close]

BLAST of HG10010578 vs. NCBI nr
Match: XP_022156652.1 (nuclear pore complex protein NUP62, partial [Momordica charantia])

HSP 1 Score: 386.7 bits (992), Expect = 2.4e-103
Identity = 246/394 (62.44%), Postives = 253/394 (64.21%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSL S+STAATT+SGFSA SQSQTSSTLVVASSSS TTSTVSA VS+TPKLPSEITGK
Sbjct: 338 GFPSLPSASTAATTSSGFSAPSQSQTSSTLVVASSSSGTTSTVSAAVSTTPKLPSEITGK 397

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDILLRLEIEVAKVVETQAELE+
Sbjct: 398 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILLRLEIEVAKVVETQAELER 457

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 458 KLELIETHQQEVDKALLSVEEDAERIYKDERGLLLDDEAASTRD---------------- 517

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 518 ------------------------------------------------------------ 577

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 578 -----------------------------------------------------------A 596

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 638 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 596

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Sbjct: 698 DEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS 596

[Close]

BLAST of HG10010578 vs. ExPASy Swiss-Prot
Match: Q8L7F7 (Nuclear pore complex protein NUP62 OS=Arabidopsis thaliana OX=3702 GN=NUP62 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.8e-75
Identity = 191/392 (48.72%), Postives = 221/392 (56.38%), Query Frame = 0


Query: 19  PSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGKTV 78
           P+ + S  ++T+T+  + SS + T +TLVV SSS   TST  A V+ +PKLPSEITGKTV
Sbjct: 486 PAFSFSLPSSTSTTAPATSSATTTQTTLVVPSSSG--TSTAVAPVAGSPKLPSEITGKTV 545

Query: 79  EEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEKKL 138
           EEIIKEWN ELQERTG+FRKQANAIAEWD+RI+QNRD+LLRLEIEVAKVVETQ+ LE++L
Sbjct: 546 EEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQL 605

Query: 139 ELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVNRG 198
           ELIETHQQEVDKALQS+EE+AERIY DER  LLDDEAASTRD                  
Sbjct: 606 ELIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRD------------------ 665

Query: 199 QIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLLGG 258
                                                                       
Sbjct: 666 ------------------------------------------------------------ 725

Query: 259 EGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPTMY 318
                                                                     MY
Sbjct: 726 ---------------------------------------------------------AMY 739

Query: 319 EQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDE 378
           EQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ IDGM+PLD VVRILNNQLSSLMWIDE
Sbjct: 786 EQSELVERELEHMTEQIRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMWIDE 739

Query: 379 KAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           KAEEFSSRIQK+ A +G   DREL+  K WMS
Sbjct: 846 KAEEFSSRIQKI-ALQGSGGDRELMAPKHWMS 739

[Close]

BLAST of HG10010578 vs. ExPASy Swiss-Prot
Match: G0SBQ3 (Nucleoporin NSP1 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=NSP1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.4e-06
Identity = 47/156 (30.13%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 22  ASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSA-TVSSTPKLPSEITGKTVEE 81
           AS+S  ATTT+    S  S T+ST      +  TT+ + A TV    +LP  +  KT++E
Sbjct: 412 ASTSAPATTTAA-PTSGASATASTTTAGQDAKTTTAGLGASTVGPQSQLP-RLKNKTMDE 471

Query: 82  IIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEKKLEL 141
           II  W  +L +   +F++QA  + EWDR +++N + + +L     +      E+E++L  
Sbjct: 472 IITRWATDLAKYQKEFKEQAAKVMEWDRLLVENGEKIQKLYTSTYEAERASNEIERQLSN 531

Query: 142 IETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAA 177
           +E+ Q+E+   L   E + + +Y  + G    ++AA
Sbjct: 532 VESQQEELTAWLDRYERELDELYAKQMGSAAGEQAA 565

[Close]

BLAST of HG10010578 vs. ExPASy Swiss-Prot
Match: Q63850 (Nuclear pore glycoprotein p62 OS=Mus musculus OX=10090 GN=Nup62 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.6e-04
Identity = 48/159 (30.19%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 22  ASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGKTVEEI 81
           A+++ A+TTT+GF+ S +   S+     SS +AT    S+T + T   P+ +T   +E +
Sbjct: 285 AAAAAASTTTTGFALSLKPLVSAG---PSSVAATALPASSTAAGTATGPA-MTYAQLESL 344

Query: 82  IKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEKKLELI 141
           I +W+ EL+++   F +QA  +  WDR +++N + +  L  EV KV   Q  L+++L+ I
Sbjct: 345 INKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFI 404

Query: 142 ETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD 181
            + Q+E++  L  +EE      K++ G +    A   R+
Sbjct: 405 LSQQKELEDLLSPLEESV----KEQSGTIYLQHADEERE 435

[Close]

BLAST of HG10010578 vs. ExPASy Swiss-Prot
Match: P17955 (Nuclear pore glycoprotein p62 OS=Rattus norvegicus OX=10116 GN=Nup62 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.5e-04
Identity = 52/168 (30.95%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 23  SSSTAATTTSGFSASSQSQTSST--------LVVA--SSSSATTSTVSATVSSTPKLPSE 82
           +S+T  TTT+  +AS+ S T++T        LV A  SS +AT    S+T   T   P+ 
Sbjct: 272 TSTTTTTTTTTTTASTSSSTTTTGFALSLKPLVPAGPSSVAATALPASSTAVGTTTGPA- 331

Query: 83  ITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQA 142
           +T   +E +I +W+ EL+++   F +QA  +  WDR +++N + +  L  EV KV   Q 
Sbjct: 332 MTYAQLESLINKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQK 391

Query: 143 ELEKKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD 181
            L+++L+ I + Q+E++  L  +EE      K++ G +    A   R+
Sbjct: 392 RLDQELDFILSQQKELEDLLSPLEESV----KEQSGTIYLQHADEERE 434

[Close]

BLAST of HG10010578 vs. ExPASy TrEMBL
Match: A0A5D3DMB1 (Nuclear pore complex protein NUP62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003180 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 253/394 (64.21%), Postives = 255/394 (64.72%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 88  GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 147

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 148 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 207

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRD                
Sbjct: 208 KLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRD---------------- 267

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 268 ------------------------------------------------------------ 327

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 328 -----------------------------------------------------------A 346

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 388 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 346

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Sbjct: 448 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 346

[Close]

BLAST of HG10010578 vs. ExPASy TrEMBL
Match: A0A1S3CAD4 (nuclear pore complex protein NUP62 OS=Cucumis melo OX=3656 GN=LOC103498773 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 253/394 (64.21%), Postives = 255/394 (64.72%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 503 GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 562

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 563 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 622

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRD                
Sbjct: 623 KLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRD---------------- 682

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 683 ------------------------------------------------------------ 742

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 743 -----------------------------------------------------------A 761

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 803 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 761

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Sbjct: 863 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 761

[Close]

BLAST of HG10010578 vs. ExPASy TrEMBL
Match: A0A0A0KA27 (Nsp1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108530 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 252/394 (63.96%), Postives = 253/394 (64.21%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSLAS+STAATTTSGFSASSQSQTSS LVVASSSS TTSTVSATVSSTPKLPSEITGK
Sbjct: 643 GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGK 702

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEII EWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK
Sbjct: 703 TVEEIINEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 762

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 763 KLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAASTRD---------------- 822

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 823 ------------------------------------------------------------ 882

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 883 -----------------------------------------------------------A 901

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 943 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 901

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAATEGPAADRELLGQK WMS
Sbjct: 1003 DEKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 901

[Close]

BLAST of HG10010578 vs. ExPASy TrEMBL
Match: A0A6J1DSI7 (nuclear pore complex protein NUP62 OS=Momordica charantia OX=3673 GN=LOC111023501 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 246/394 (62.44%), Postives = 253/394 (64.21%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GFPSL S+STAATT+SGFSA SQSQTSSTLVVASSSS TTSTVSA VS+TPKLPSEITGK
Sbjct: 338 GFPSLPSASTAATTSSGFSAPSQSQTSSTLVVASSSSGTTSTVSAAVSTTPKLPSEITGK 397

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDILLRLEIEVAKVVETQAELE+
Sbjct: 398 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILLRLEIEVAKVVETQAELER 457

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 458 KLELIETHQQEVDKALLSVEEDAERIYKDERGLLLDDEAASTRD---------------- 517

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 518 ------------------------------------------------------------ 577

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 578 -----------------------------------------------------------A 596

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 638 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 596

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Sbjct: 698 DEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS 596

[Close]

BLAST of HG10010578 vs. ExPASy TrEMBL
Match: A0A6J1L2D4 (nuclear pore complex protein NUP62 OS=Cucurbita maxima OX=3661 GN=LOC111499220 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 247/394 (62.69%), Postives = 253/394 (64.21%), Query Frame = 0


Query: 17  GFPSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGK 76
           GF SLAS+S AATTTSG +ASSQSQTSSTLVVASSSS TTSTVSATVS+TPKLPSEITGK
Sbjct: 524 GFSSLASASAAATTTSGSNASSQSQTSSTLVVASSSSGTTSTVSATVSATPKLPSEITGK 583

Query: 77  TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEK 136
           TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDILLRLEIEVAKVVETQ ELEK
Sbjct: 584 TVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILLRLEIEVAKVVETQTELEK 643

Query: 137 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVN 196
           KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD                
Sbjct: 644 KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRD---------------- 703

Query: 197 RGQIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLL 256
                                                                       
Sbjct: 704 ------------------------------------------------------------ 763

Query: 257 GGEGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPT 316
                                                                       
Sbjct: 764 -----------------------------------------------------------A 782

Query: 317 MYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 376
           MYEQAEYIERELEQMTEQIKSIIQTLNA+QGGELDVIDGMTPLDAVVRILNNQLSSLMWI
Sbjct: 824 MYEQAEYIERELEQMTEQIKSIIQTLNASQGGELDVIDGMTPLDAVVRILNNQLSSLMWI 782

Query: 377 DEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           DEKAEEFSSRIQKLAAT+GPAADRELLGQKFWMS
Sbjct: 884 DEKAEEFSSRIQKLAATQGPAADRELLGQKFWMS 782

[Close]

BLAST of HG10010578 vs. TAIR 10
Match: AT2G45000.1 (structural constituent of nuclear pore )

HSP 1 Score: 283.5 bits (724), Expect = 2.7e-76
Identity = 191/392 (48.72%), Postives = 221/392 (56.38%), Query Frame = 0


Query: 19  PSLASSSTAATTTSGFSASSQSQTSSTLVVASSSSATTSTVSATVSSTPKLPSEITGKTV 78
           P+ + S  ++T+T+  + SS + T +TLVV SSS   TST  A V+ +PKLPSEITGKTV
Sbjct: 486 PAFSFSLPSSTSTTAPATSSATTTQTTLVVPSSSG--TSTAVAPVAGSPKLPSEITGKTV 545

Query: 79  EEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIEVAKVVETQAELEKKL 138
           EEIIKEWN ELQERTG+FRKQANAIAEWD+RI+QNRD+LLRLEIEVAKVVETQ+ LE++L
Sbjct: 546 EEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQL 605

Query: 139 ELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDGMGLKKLRRFWARLVNRG 198
           ELIETHQQEVDKALQS+EE+AERIY DER  LLDDEAASTRD                  
Sbjct: 606 ELIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRD------------------ 665

Query: 199 QIPYPNQGEMDYEPSNLSIVSYSDDDSFLSSPFVLERSPPTVGDLFLEKEGNQLVHLLGG 258
                                                                       
Sbjct: 666 ------------------------------------------------------------ 725

Query: 259 EGEVNSAIPLELDHGGLQSFVEAEGGHRLNPITNRVSFGSSVEARSWFSRFWQLDQPTMY 318
                                                                     MY
Sbjct: 726 ---------------------------------------------------------AMY 739

Query: 319 EQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDE 378
           EQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ IDGM+PLD VVRILNNQLSSLMWIDE
Sbjct: 786 EQSELVERELEHMTEQIRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMWIDE 739

Query: 379 KAEEFSSRIQKLAATEGPAADRELLGQKFWMS 411
           KAEEFSSRIQK+ A +G   DREL+  K WMS
Sbjct: 846 KAEEFSSRIQKI-ALQGSGGDRELMAPKHWMS 739

The following BLAST results are available for this feature:

BLAST of HG10010578 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459731.1	3.1e-106	64.21	PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo]	[more]
TYK24755.1	3.1e-106	64.21	nuclear pore complex protein NUP62 [Cucumis melo var. makuwa]	[more]
XP_031743587.1	6.9e-106	64.21	nuclear pore complex protein NUP62 [Cucumis sativus] >KGN46560.2 hypothetical pr...	[more]
XP_038874708.1	1.5e-105	63.71	nuclear pore complex protein NUP62 [Benincasa hispida]	[more]
XP_022156652.1	2.4e-103	62.44	nuclear pore complex protein NUP62, partial [Momordica charantia]	[more]

BLAST of HG10010578 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7F7	3.8e-75	48.72	Nuclear pore complex protein NUP62 OS=Arabidopsis thaliana OX=3702 GN=NUP62 PE=1...	[more]
G0SBQ3	6.4e-06	30.13	Nucleoporin NSP1 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI ...	[more]
Q63850	1.6e-04	30.19	Nuclear pore glycoprotein p62 OS=Mus musculus OX=10090 GN=Nup62 PE=1 SV=2	[more]
P17955	3.5e-04	30.95	Nuclear pore glycoprotein p62 OS=Rattus norvegicus OX=10116 GN=Nup62 PE=1 SV=1	[more]

BLAST of HG10010578 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMB1	1.5e-106	64.21	Nuclear pore complex protein NUP62 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CAD4	1.5e-106	64.21	nuclear pore complex protein NUP62 OS=Cucumis melo OX=3656 GN=LOC103498773 PE=3 ...	[more]
A0A0A0KA27	1.3e-105	63.96	Nsp1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108530 PE=3...	[more]
A0A6J1DSI7	1.2e-103	62.44	nuclear pore complex protein NUP62 OS=Momordica charantia OX=3673 GN=LOC11102350...	[more]
A0A6J1L2D4	2.0e-103	62.69	nuclear pore complex protein NUP62 OS=Cucurbita maxima OX=3661 GN=LOC111499220 P...	[more]

BLAST of HG10010578 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45000.1	2.7e-76	48.72	structural constituent of nuclear pore	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..161
None	No IPR available	COILS	Coil	Coil	coord: 321..341
None	No IPR available	GENE3D	1.20.5.170		coord: 104..163 e-value: 1.9E-9 score: 39.3
None	No IPR available	PANTHER	PTHR12084:SF0	NUCLEOPORIN 62-LIKE	coord: 316..403
None	No IPR available	PANTHER	PTHR12084:SF0	NUCLEOPORIN 62-LIKE	coord: 19..182
IPR007758	Nucleoporin, NSP1-like, C-terminal	PFAM	PF05064	Nsp1_C	coord: 61..165 e-value: 2.2E-22 score: 79.0
IPR026010	Nucleoporin NSP1/NUP62	PANTHER	PTHR12084	NUCLEAR PORE GLYCOPROTEIN P62-RELATED	coord: 316..403
IPR026010	Nucleoporin NSP1/NUP62	PANTHER	PTHR12084	NUCLEAR PORE GLYCOPROTEIN P62-RELATED	coord: 19..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010578.1	HG10010578.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0071705	nitrogen compound transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0071702	organic substance transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0017056	structural constituent of nuclear pore