HG10020554 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTGGTGCTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGACGTTCTTGCTGGGTATCTCTCTGACTCTCTACGTTCCTTTGTTTGCTTGCTTCTTGTGCGCCTGATTGAAGCAGTAAAAAAAAAAAAAAAAAAAAAACCCCATAATGGGGAATTAGTTTCTTAATGTTCCCAGATATTGATACATTGGCATGATTTGATTTGCAGGCCTGTTGTCGGTCTTGTCTATCCTCTGTAAGTTCTTTTTTCACTCCCACCTTCAAAATTTATTGCCAATTGGGCTGATTTCGATCTTTTTAATATTGGGTTTTGGGCTTTTTTTGTAGATATGCCTCAATCAGAGCCATCGAGACCAAATCTCATGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACCCTCTTCGAACTGACCTTCGCCAAGGTTCTTGAATGGTAAGCGTTTAGGGGGTTTCTTCTTTCTCAATTGCTTTGAATTTGATCTGTTCACTGAAAATTTCTCATGGCAGGATTCCAATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTATGAGCATTACTTAAGACCTTTAATGGTGAACCAGCAGAGAGTCAACGTTTGGTATGTTCCTAAAGGAAAAGACCCTTTGAACAAGCGTGAGGACATTATCACTGCTGCAGAGAAGTACATTCAGGAGCATGGAACTGGTGAACTTCAATACATGCTCGACAATGTGAGGATGATTTTGGTTGAAATTGGTGCTTCTCCCTTTAATTCACAAAGCTTTACAAAGTTTTCTAATGACTAAATTGGTGCATTTCTTCTTGTTTTTGTTCTACTTCTACAGGCCGAAGTGCACAGGAGAAATAGCAGCAGTTATTATGGTTATACAGAGGACTATGGATACTGA ATGGGATCTGGTGCTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGACGTTCTTGCTGGGCCTGTTGTCGGTCTTGTCTATCCTCTATATGCCTCAATCAGAGCCATCGAGACCAAATCTCATGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACCCTCTTCGAACTGACCTTCGCCAAGGTTCTTGAATGGATTCCAATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTATGAGCATTACTTAAGACCTTTAATGGTGAACCAGCAGAGAGTCAACGTTTGGTATGTTCCTAAAGGAAAAGACCCTTTGAACAAGCGTGAGGACATTATCACTGCTGCAGAGAAGTACATTCAGGAGCATGGAACTGGTGAACTTCAATACATGCTCGACAATGCCGAAGTGCACAGGAGAAATAGCAGCAGTTATTATGGTTATACAGAGGACTATGGATACTGA ATGGGATCTGGTGCTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGACGTTCTTGCTGGGCCTGTTGTCGGTCTTGTCTATCCTCTATATGCCTCAATCAGAGCCATCGAGACCAAATCTCATGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTGCACTCCATGATTACCCTCTTCGAACTGACCTTCGCCAAGGTTCTTGAATGGATTCCAATATGGCCATATGCGAAGCTGGTTCTGCTCTGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTATGAGCATTACTTAAGACCTTTAATGGTGAACCAGCAGAGAGTCAACGTTTGGTATGTTCCTAAAGGAAAAGACCCTTTGAACAAGCGTGAGGACATTATCACTGCTGCAGAGAAGTACATTCAGGAGCATGGAACTGGTGAACTTCAATACATGCTCGACAATGCCGAAGTGCACAGGAGAAATAGCAGCAGTTATTATGGTTATACAGAGGACTATGGATACTGA MGSGAGNFFKVVLKNFDVLAGPVVGLVYPLYASIRAIETKSHVDDQQWLTYWVLHSMITLFELTFAKVLEWIPIWPYAKLVLLCWLSGFSGASYVYEHYLRPLMVNQQRVNVWYVPKGKDPLNKREDIITAAEKYIQEHGTGELQYMLDNAEVHRRNSSSYYGYTEDYGY Homology
BLAST of HG10020554 vs. NCBI nr
Match: XP_038893618.1 (HVA22-like protein a [Benincasa hispida]) HSP 1 Score: 350.5 bits (898), Expect = 8.1e-93 Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of HG10020554 vs. NCBI nr
Match: XP_008440737.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >KAA0036071.1 HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98878.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91 Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of HG10020554 vs. NCBI nr
Match: XP_004137404.1 (HVA22-like protein a [Cucumis sativus] >KGN63983.1 hypothetical protein Csa_013507 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 3.4e-91 Identity = 164/170 (96.47%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of HG10020554 vs. NCBI nr
Match: XP_022137380.1 (HVA22-like protein a [Momordica charantia]) HSP 1 Score: 332.0 bits (850), Expect = 3.0e-87 Identity = 156/170 (91.76%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of HG10020554 vs. NCBI nr
Match: XP_022924017.1 (HVA22-like protein a [Cucurbita moschata]) HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84 Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 6.7e-58 Identity = 105/172 (61.05%), Postives = 133/172 (77.33%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.6e-43 Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-42 Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.5e-21 Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy TrEMBL
Match: A0A5D3BL17 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00740 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 5.6e-92 Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy TrEMBL
Match: A0A1S3B2F5 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103485036 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 5.6e-92 Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy TrEMBL
Match: A0A0A0LQD1 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G033020 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 164/170 (96.47%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy TrEMBL
Match: A0A6J1C6H3 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111008847 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87 Identity = 156/170 (91.76%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of HG10020554 vs. ExPASy TrEMBL
Match: A0A6J1E7Q1 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431566 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.1e-85 Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of HG10020554 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 224.9 bits (572), Expect = 4.8e-59 Identity = 105/172 (61.05%), Postives = 133/172 (77.33%), Query Frame = 0
BLAST of HG10020554 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 176.0 bits (445), Expect = 2.5e-44 Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of HG10020554 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43 Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of HG10020554 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of HG10020554 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 102.1 bits (253), Expect = 4.6e-22 Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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