HG10016314 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016314
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Endochitinase 1
Location	Chr03: 4151800 .. 4153172 (-)
RNA-Seq Expression	HG10016314
Synteny	HG10016314

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATAATAATAAAAGTTTATGGATTAATATTGTTATGTTTTGCATTGTGGTTGGGAGGCTCTGCAGAGCAATGTGGACGGCAGGCCGGCGGCGCTGTTTGCCCAAACGGGCTGTGTTGCAGCCAGTATGGGTGGTGCGGCGCCACCAAGCCCTACTGTGCAGCTGGTTGTCAAAGCCAGTGTCGATCCAGTGGTTCAACTTCGCCGTCGAGCGGCGGAGGAGACGTTGGCACGGTCATCACTGCCGCTCTTTTCGATCAAATGCTCAAGTATCGAAACGATACACGATGCCCTAGCAATGGATTCTATACTTTGCTTTCATTGCCGCTGCTCGATCCTTTGGAGGCTTTGGTACTACTGGAGACGATAATACACGTAAAAGGGAGCTTGCAGCTTTTTTGGCTCAAACTTCTCATGAGACCACTGGTTAGTAATATATTTTAAAAGAAAATTCACACTATATAATTTAAATTTACCGTAATTTTTTTCCTCCAATTAATATATATTCATTTTAATTTATTGGACCTTTCCAACAAATATTTGAACTTGTATTAAAGTAATGATACAATTTAATTTTTTGATTGATTGATAATTTAACATTGAGATATTATTATTGGTGTTAGGAGGATGGGCAACTGCACCGGATGGTCCATATGCATGGAGATATTGTTTCATAAGAGAACTCAATCAAGATGCTTCCTATTGTGTATCTGATCCACAATGGCCTTGCACTCCCGGTCAGAAATATTATGGCCGTGGACCCATCCAGCTCTCTTAGTAATAATTATTATACCATTTTTTACCTTAATTATAATCTTTATAAATACATGAGTTATTCCTCTTACTGTCAATTAGTTTTGAGATGAAACTTCATGTTTTTCTGATACATTCCTTTTTTTCTTTTTACTTTATTTTTCAAAACATAATTAATTTTTCTTTCGTTTGTAATTCACTAGACTAATTATAATTACTAAATATTTGTTTTTCTTTGTATCATGTTAGCAACTACAACTATGGACAAGCTGGTAGATTTTTAAGGTTGAATTTGTTAAACAATTCAGATTTAGTTGCCAGACTCAGTCATTTCTTTCAAGATAGCCATTTGGTTTTGGATGACACCACAAAGAAACAAACCATCAAGTCATAATATTGTGATTGACAATTGGCAACCGTCAGATGCAGATAGAGCTGCTGGAAGAGTACCTGGCTATGACGTCATCACCAACATCATCAATGGTGGACTTGAATGTGGGCATGGCCTTGATAATAGAGTTGCTGATAGAATTGGATTTTACAAAAAATATTGTGATATATTGGGTGTTAGCTATGGAAATAATTTAGATTGCTACAATCAACAACCTTTTGCCTAA

mRNA sequence

ATGAGAATAATAATAAAAGTTTATGGATTAATATTGTTATGTTTTGCATTGTGGTTGGGAGGCTCTGCAGAGCAATGTGGACGGCAGGCCGGCGGCGCTGTTTGCCCAAACGGGCTGTGTTGCAGCCAGTATGGGTGGTGCGGCGCCACCAAGCCCTACTGTGCAGCTGGTTGTCAAAGCCAGTGTCGATCCAGTGGTTCAACTTCGCCGTCGAGCGGCGGAGGAGACGTTGGCACGGTCATCACTGCCGCTCTTTTCGATCAAATGCTCAAGTATCGAAACGATACACGATGCCCTAGCAATGGATTCTATACTTTGCTTTCATTGCCGCTGCTCGATCCTTTGGAGGCTTTGGTACTACTGGAGACGATAATACACGTAAAAGGGAGCTTGCAGCTTTTTTGGCTCAAACTTCTCATGAGACCACTGATAGCCATTTGGTTTTGGATGACACCACAAAGAAACAAACCATCAAGTCATAATATTGTGATTGACAATTGGCAACCGTCAGATGCAGATAGAGCTGCTGGAAGAGTACCTGGCTATGACGTCATCACCAACATCATCAATGGTGGACTTGAATGTGGGCATGGCCTTGATAATAGAGTTGCTGATAGAATTGGATTTTACAAAAAATATTGTGATATATTGGGTGTTAGCTATGGAAATAATTTAGATTGCTACAATCAACAACCTTTTGCCTAA

Coding sequence (CDS)

ATGAGAATAATAATAAAAGTTTATGGATTAATATTGTTATGTTTTGCATTGTGGTTGGGAGGCTCTGCAGAGCAATGTGGACGGCAGGCCGGCGGCGCTGTTTGCCCAAACGGGCTGTGTTGCAGCCAGTATGGGTGGTGCGGCGCCACCAAGCCCTACTGTGCAGCTGGTTGTCAAAGCCAGTGTCGATCCAGTGGTTCAACTTCGCCGTCGAGCGGCGGAGGAGACGTTGGCACGGTCATCACTGCCGCTCTTTTCGATCAAATGCTCAAGTATCGAAACGATACACGATGCCCTAGCAATGGATTCTATACTTTGCTTTCATTGCCGCTGCTCGATCCTTTGGAGGCTTTGGTACTACTGGAGACGATAATACACGTAAAAGGGAGCTTGCAGCTTTTTTGGCTCAAACTTCTCATGAGACCACTGATAGCCATTTGGTTTTGGATGACACCACAAAGAAACAAACCATCAAGTCATAATATTGTGATTGACAATTGGCAACCGTCAGATGCAGATAGAGCTGCTGGAAGAGTACCTGGCTATGACGTCATCACCAACATCATCAATGGTGGACTTGAATGTGGGCATGGCCTTGATAATAGAGTTGCTGATAGAATTGGATTTTACAAAAAATATTGTGATATATTGGGTGTTAGCTATGGAAATAATTTAGATTGCTACAATCAACAACCTTTTGCCTAA

Protein sequence

MRIIIKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRSSGSTSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSLPLLDPLEALVLLETIIHVKGSLQLFWLKLLMRPLIAIWFWMTPQRNKPSSHNIVIDNWQPSDADRAAGRVPGYDVITNIINGGLECGHGLDNRVADRIGFYKKYCDILGVSYGNNLDCYNQQPFA

Homology

[Close]

BLAST of HG10016314 vs. NCBI nr
Match: KAF3952281.1 (hypothetical protein CMV_022148 [Castanea mollissima])

HSP 1 Score: 278.9 bits (712), Expect = 4.1e-71
Identity = 156/311 (50.16%), Postives = 174/311 (55.95%), Query Frame = 0


Query: 11  ILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRSSG---- 70
           +LL  A  LG SAEQCGRQAGGAVCPNGLCCSQYGWCG T  YC  GCQSQC S G    
Sbjct: 6   LLLFLAFLLGTSAEQCGRQAGGAVCPNGLCCSQYGWCGNTNDYCGNGCQSQCSSGGSPTT 65

Query: 71  -STSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL---------------P 130
            S +PS GGGDVG++I+A+LFDQMLKYRND RC SNGFYT  +                 
Sbjct: 66  PSPTPSGGGGDVGSLISASLFDQMLKYRNDPRCKSNGFYTYNAFIAAARSFNGFGTTGDV 125

Query: 131 LLDPLEALVLLETIIHV------------------------------------------- 190
                E    L    H                                            
Sbjct: 126 ATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVTEINKQTYCTSTSWPCAPGKQYY 185

Query: 191 -KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPSSHNIV 235
            +G +QL                L+  P +           AIWFWMTPQ NKPSSH+++
Sbjct: 186 GRGPIQLTHNYNYGQAGKAIGADLINNPDLVATDPTISFKTAIWFWMTPQANKPSSHDVI 245

[Close]

BLAST of HG10016314 vs. NCBI nr
Match: XP_030955250.1 (endochitinase-like [Quercus lobata])

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-69
Identity = 152/311 (48.87%), Postives = 174/311 (55.95%), Query Frame = 0


Query: 11  ILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRSSG---- 70
           +LL  A  LG SAEQCG QAGGAVCP+GLCCS++GWCG+T  YC  GCQSQC S G    
Sbjct: 6   LLLFLAFLLGASAEQCGSQAGGAVCPSGLCCSRFGWCGSTSDYCGNGCQSQCTSGGGSPT 65

Query: 71  --STSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL--------------- 130
             S +PS GGGDVG++I+A+LFDQMLKYRND RC SNGFYT  +                
Sbjct: 66  TPSPTPSGGGGDVGSLISASLFDQMLKYRNDPRCKSNGFYTYNAFIAAARSFNGFGTTGD 125

Query: 131 PLLDPLEALVLLETIIHV------------------------------------------ 190
                 E    L    H                                           
Sbjct: 126 VTTRKRELAAFLGQTSHETTGGWASAPDGPYAWGYCFVTENNKQTYCTSTSWPCAPGKQY 185

Query: 191 --KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPSSHNI 234
             +G +QL                L+  P +           AIWFWMTPQ NKPSSH++
Sbjct: 186 YGRGPIQLTHNYNYGQAGKAIGADLINNPDLVATDPTLSFKTAIWFWMTPQANKPSSHDV 245

[Close]

BLAST of HG10016314 vs. NCBI nr
Match: KAE8076270.1 (hypothetical protein FH972_014933 [Carpinus fangiana])

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-69
Identity = 152/316 (48.10%), Postives = 184/316 (58.23%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K+Y L+ L  A  LG SAEQCGRQAGGAVCPNGLCCSQ+G+CG+T  YC  GCQSQC++
Sbjct: 3   MKLYTLV-LSLAFLLGASAEQCGRQAGGAVCPNGLCCSQFGYCGSTNDYCGTGCQSQCKT 62

Query: 65  SGSTSPS---SGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTL--------------- 124
            G+ +PS   SGGGDVG++I+ +LFDQ+LKYRND RC SNGFYT                
Sbjct: 63  GGTPTPSPTPSGGGDVGSIISGSLFDQLLKYRNDPRCKSNGFYTYNAFIAAARSYGGFGT 122

Query: 125 --------------------------LSLP---------LLDPLEALVLLETI------- 184
                                      S P          +  +  L    +        
Sbjct: 123 SGDVNTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCFVTEINKLTYCTSSTQWPCAP 182

Query: 185 ---IHVKGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPS 235
               + +G +QL              + LL  P I           +IWFWMT Q NKPS
Sbjct: 183 GKQYYGRGPIQLTHNYNYGQAGKAIGVDLLNNPDIVATDPVISFKTSIWFWMTAQANKPS 242

[Close]

BLAST of HG10016314 vs. NCBI nr
Match: KAF3972599.1 (hypothetical protein CMV_003921 [Castanea mollissima])

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68
Identity = 152/321 (47.35%), Postives = 177/321 (55.14%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K++ LILL  A  LG +AEQCG QAGGAVCPNGLCCSQYGWCG T  YC  GCQSQC S
Sbjct: 1   MKLFSLILLSLAYLLGTTAEQCGTQAGGAVCPNGLCCSQYGWCGNTNDYCGNGCQSQCSS 60

Query: 65  SGSTSPSS---------GGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL------ 124
            GS +P++         GGGDV ++I+A+LFDQMLKYRND RC SNGFYT  +       
Sbjct: 61  GGSPTPTTPSPTTPSGGGGGDVSSLISASLFDQMLKYRNDPRCKSNGFYTYNAFIAAAQS 120

Query: 125 ---------PLLDPLEALVLLETIIHV--------------------------------- 184
                          E    L    H                                  
Sbjct: 121 FNGFGTTGDVTTRKRELAAFLAQTSHETTGGWPSAPDGPYAWGYCFITEGDKQTLCTSPD 180

Query: 185 -----------KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQ 235
                      +G +QL                L+  P +           AIWFWMTPQ
Sbjct: 181 WPCASGQQYYGRGPIQLSHNYNYGQAGNAIGADLINNPDLVATDPTVSFKTAIWFWMTPQ 240

[Close]

BLAST of HG10016314 vs. NCBI nr
Match: KAG2705397.1 (hypothetical protein I3760_05G051100 [Carya illinoinensis])

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-68
Identity = 151/313 (48.24%), Postives = 176/313 (56.23%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K+Y LIL   A  LG SAEQCG+QAGGAVCPNGLCCS++GWCG T  YC   CQSQCR 
Sbjct: 3   MKLYSLILF-LAFLLGTSAEQCGKQAGGAVCPNGLCCSRFGWCGTTTEYCGTDCQSQCRP 62

Query: 65  SGSTSPS-SGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL-------------- 124
            G+ SP+ S GGDV ++I+A+LFDQ+LKYRND RC SNGFYT  +               
Sbjct: 63  GGTPSPTPSAGGDVSSIISASLFDQLLKYRNDGRCKSNGFYTYNAFLAAARSFSGFGTTG 122

Query: 125 -PLLDPLEALVLLETIIHV----------------------------------------- 184
                  E    L    H                                          
Sbjct: 123 DANTRKREIAAFLGQTSHETTGGWPSAPDGPYAWGYCFITENNKADYCTSKDWPCAPGKQ 182

Query: 185 ---KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPSSHN 235
              +G +QL                L+  P +           AIWFWMTPQ NKPSSH+
Sbjct: 183 YYGRGPIQLTHNYNYGQAGKAIGADLIKNPDLVATDPTISFKTAIWFWMTPQANKPSSHD 242

[Close]

BLAST of HG10016314 vs. ExPASy Swiss-Prot
Match: P36907 (Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.5e-63
Identity = 141/320 (44.06%), Postives = 170/320 (53.12%), Query Frame = 0


Query: 1   MRIIIKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQS 60
           M+  +KV   IL    L+LG  AEQCG QAGGAVCPNGLCCS++G+CG+T PYC  GCQS
Sbjct: 1   MKRTLKVSFFILCLLPLFLGSKAEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQS 60

Query: 61  QCRSSGS---TSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL-------- 120
           QC+SS +    +PS+GGGDVG ++ ++LFDQMLKYRND RC  +GFYT  +         
Sbjct: 61  QCKSSPTPTIPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN 120

Query: 121 -------PLLDPLEALVLLETIIHV----------------------------------- 180
                        E    L    H                                    
Sbjct: 121 GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDW 180

Query: 181 ----------KGSLQL-----FWLK--------------LLMRPLI----AIWFWMTPQR 235
                     +G +QL     + L               L   P +    AIWFWMTPQ 
Sbjct: 181 PCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQA 240

[Close]

BLAST of HG10016314 vs. ExPASy Swiss-Prot
Match: Q39799 (Endochitinase 1 OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-60
Identity = 136/315 (43.17%), Postives = 160/315 (50.79%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAA-GCQSQCR 64
           ++   + LL     + GSAEQCGRQAGGA+CP GLCCSQ+GWCG+T  YC   GCQSQC 
Sbjct: 4   LQALSIFLLLLLYVVVGSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS 63

Query: 65  SSGSTSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYT-------LLSLPLLDPL- 124
            SG   P+ G G +  +I+   F+QML +RND  CP+ GFYT         S P      
Sbjct: 64  GSG---PAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTG 123

Query: 125 -------EALVLLETIIHV----------------------------------------- 184
                  E    L    H                                          
Sbjct: 124 DQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAP 183

Query: 185 ------KGSLQLFW------------LKLLMRPLI-----------AIWFWMTPQRNKPS 234
                 +G +QL W            + LL  P +           A WFWMTPQ  KPS
Sbjct: 184 GKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPS 243

[Close]

BLAST of HG10016314 vs. ExPASy Swiss-Prot
Match: P19171 (Basic endochitinase B OS=Arabidopsis thaliana OX=3702 GN=CHI-B PE=1 SV=3)

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-58
Identity = 132/309 (42.72%), Postives = 160/309 (51.78%), Query Frame = 0


Query: 11  ILLCFALWLG-GSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYC-AAGCQSQCRSSGST 70
           + L F+L L   SAEQCGRQAGGA+CPNGLCCS++GWCG T+PYC   GCQSQC   G  
Sbjct: 20  LFLIFSLLLSLSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGG-- 79

Query: 71  SPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL------------------- 130
           +P    GD+  +I+++ FD MLK+RND  CP+ GFYT  +                    
Sbjct: 80  TPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATR 139

Query: 131 --------------------------------------PLLDPLEALVLLETI----IHV 190
                                                 P  D  E             + 
Sbjct: 140 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYG 199

Query: 191 KGSLQLFW------------LKLLMRPLI-----------AIWFWMTPQRNKPSSHNIVI 234
           +G +QL W            + LL  P +           AIWFWMT Q  KPS H ++ 
Sbjct: 200 RGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIA 259

[Close]

BLAST of HG10016314 vs. ExPASy Swiss-Prot
Match: Q42993 (Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.4e-58
Identity = 127/301 (42.19%), Postives = 153/301 (50.83%), Query Frame = 0


Query: 24  EQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRSS----GSTSPSSGGGD-VG 83
           EQCG QAGGA+CPN LCCSQYGWCG+T  YC +GCQSQC  S    G T PS GGG  V 
Sbjct: 21  EQCGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVA 80

Query: 84  TVITAALFDQMLKYRNDTRCPSNGFYTLLSL---------------PLLDPLEALVLLET 143
           ++++ +LFDQML +RND  CP+  FYT  +                      E    L  
Sbjct: 81  SIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQ 140

Query: 144 IIHV------------------------------------------------KGSLQLFW 203
             H                                                 +G +Q+ +
Sbjct: 141 TSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISY 200

Query: 204 ------------LKLLMRPLI-----------AIWFWMTPQRNKPSSHNIVIDNWQPSDA 234
                         LL  P +           A WFWMTPQ  KPS H ++   W P+  
Sbjct: 201 NYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGN 260

[Close]

BLAST of HG10016314 vs. ExPASy Swiss-Prot
Match: Q09023 (Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.2e-58
Identity = 136/311 (43.73%), Postives = 161/311 (51.77%), Query Frame = 0


Query: 10  LILLCFALWLGGS-AEQCGRQAGGAVCPNGLCCSQYGWCGATKPYC-AAGCQSQCRSSGS 69
           L+ L F+  L  S AEQCGRQAGGA+CPNGLCCS++GWCG T+ YC   GCQSQC   G 
Sbjct: 6   LLFLIFSFLLSFSLAEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC---GG 65

Query: 70  TSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYT-------LLSLPLLDPLEALVL 129
           T P    GD+  +I+ + FD MLK+RND  CP+ GFYT         S P          
Sbjct: 66  TPPGP-TGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTAT 125

Query: 130 LETII------------------------------------------------------H 189
            +  I                                                      +
Sbjct: 126 RKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYY 185

Query: 190 VKGSLQLFW------------LKLLMRPLI-----------AIWFWMTPQRNKPSSHNIV 235
            +G +QL W              LL  P +           AIWFWMTPQ  KPS H ++
Sbjct: 186 GRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVI 245

[Close]

BLAST of HG10016314 vs. ExPASy TrEMBL
Match: A0A7N2L2R1 (Chitin-binding type-1 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 6.4e-70
Identity = 154/312 (49.36%), Postives = 181/312 (58.01%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K+  LILL FA  LG +AEQCG QAGGAVCPNGLCCSQ+GWCG+T  YC  GCQSQC  
Sbjct: 1   MKLVSLILLFFAFLLGTTAEQCGTQAGGAVCPNGLCCSQFGWCGSTNDYCGNGCQSQCSP 60

Query: 65  SGS------TSPS-SGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSLPL------ 124
            GS      T+PS  GGGDV ++I+A+LFDQMLKYRND RC SNGFYT  +         
Sbjct: 61  GGSPTTPSPTTPSGGGGGDVSSLISASLFDQMLKYRNDPRCKSNGFYTYNAFIAAAQSFN 120

Query: 125 --------------LDPLEALVLLETI--------IHVKGSLQLFWLKLLMRPLI----- 184
                         L    A    ET          H+ G + L   K   +P++     
Sbjct: 121 GFGTTGDDTTRKRELAAFLAQTSHETTGGWSSAPDGHMHGDIALL-PKKTSKPIVHQQIG 180

Query: 185 ------------------------------------------AIWFWMTPQRNKPSSHNI 235
                                                     AIWFWMTPQ NKPSSHN+
Sbjct: 181 HVHLANNIMAEDLSNSLSNAIGADLINNPDLVAIDPTISFKTAIWFWMTPQANKPSSHNV 240

[Close]

BLAST of HG10016314 vs. ExPASy TrEMBL
Match: A0A7N2L2C5 (Chitin-binding type-1 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.3e-70
Identity = 152/311 (48.87%), Postives = 174/311 (55.95%), Query Frame = 0


Query: 11  ILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRSSG---- 70
           +LL  A  LG SAEQCG QAGGAVCP+GLCCS++GWCG+T  YC  GCQSQC S G    
Sbjct: 6   LLLFLAFLLGASAEQCGSQAGGAVCPSGLCCSRFGWCGSTSDYCGNGCQSQCTSGGGSPT 65

Query: 71  --STSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL--------------- 130
             S +PS GGGDVG++I+A+LFDQMLKYRND RC SNGFYT  +                
Sbjct: 66  TPSPTPSGGGGDVGSLISASLFDQMLKYRNDPRCKSNGFYTYNAFIAAARSFNGFGTTGD 125

Query: 131 PLLDPLEALVLLETIIHV------------------------------------------ 190
                 E    L    H                                           
Sbjct: 126 VTTRKRELAAFLGQTSHETTGGWASAPDGPYAWGYCFVTENNKQTYCTSTSWPCAPGKQY 185

Query: 191 --KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPSSHNI 234
             +G +QL                L+  P +           AIWFWMTPQ NKPSSH++
Sbjct: 186 YGRGPIQLTHNYNYGQAGKAIGADLINNPDLVATDPTLSFKTAIWFWMTPQANKPSSHDV 245

[Close]

BLAST of HG10016314 vs. ExPASy TrEMBL
Match: A0A5N6REP0 (Chitin-binding type-1 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014933 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69
Identity = 152/316 (48.10%), Postives = 184/316 (58.23%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K+Y L+ L  A  LG SAEQCGRQAGGAVCPNGLCCSQ+G+CG+T  YC  GCQSQC++
Sbjct: 3   MKLYTLV-LSLAFLLGASAEQCGRQAGGAVCPNGLCCSQFGYCGSTNDYCGTGCQSQCKT 62

Query: 65  SGSTSPS---SGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTL--------------- 124
            G+ +PS   SGGGDVG++I+ +LFDQ+LKYRND RC SNGFYT                
Sbjct: 63  GGTPTPSPTPSGGGDVGSIISGSLFDQLLKYRNDPRCKSNGFYTYNAFIAAARSYGGFGT 122

Query: 125 --------------------------LSLP---------LLDPLEALVLLETI------- 184
                                      S P          +  +  L    +        
Sbjct: 123 SGDVNTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCFVTEINKLTYCTSSTQWPCAP 182

Query: 185 ---IHVKGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPS 235
               + +G +QL              + LL  P I           +IWFWMT Q NKPS
Sbjct: 183 GKQYYGRGPIQLTHNYNYGQAGKAIGVDLLNNPDIVATDPVISFKTSIWFWMTAQANKPS 242

[Close]

BLAST of HG10016314 vs. ExPASy TrEMBL
Match: A0A6J1BU42 (endochitinase A-like OS=Momordica charantia OX=3673 GN=LOC111005566 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.1e-68
Identity = 152/313 (48.56%), Postives = 172/313 (54.95%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLG-GSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCR 64
           +K + LI+L FAL+LG  SAEQCGRQA GA+CPN LCCSQ+GWCG+T  YC  GCQSQC 
Sbjct: 1   MKAHTLIILAFALFLGAASAEQCGRQANGALCPNRLCCSQHGWCGSTDEYCKNGCQSQCG 60

Query: 65  SSGSTSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYT---LLSLPLLDP------ 124
                  + G GDVG +IT A+FDQMLKYRND RCPSNGFY+    +S     P      
Sbjct: 61  GQTPPPTNPGSGDVGRIITPAIFDQMLKYRNDARCPSNGFYSYNAFISAARSFPGFGTTG 120

Query: 125 ------LEALVLLETIIHV----------------------------------------- 184
                  E    L    H                                          
Sbjct: 121 DDATRKRELAAFLGQTSHETTGGWATAPDGPYAWGYCFIRERNQDVYCTPSQQWPCAPGQ 180

Query: 185 ----KGSLQL------------FWLKLLMRP-----------LIAIWFWMTPQRNKPSSH 234
               +G +QL              L LL  P             AIWFWMTPQ NKPSSH
Sbjct: 181 KYYGRGPIQLTHNYNYGPAGTALGLNLLNNPDSVVTDATVSFKTAIWFWMTPQGNKPSSH 240

[Close]

BLAST of HG10016314 vs. ExPASy TrEMBL
Match: A0A2I4GDR0 (endochitinase-like OS=Juglans regia OX=51240 GN=LOC109007006 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 150/313 (47.92%), Postives = 176/313 (56.23%), Query Frame = 0


Query: 5   IKVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQSQCRS 64
           +K+Y LIL   A  LG SAEQCGRQAGGAVCPNGLCCS++GWCG T  +C   CQSQC  
Sbjct: 3   MKLYSLILF-LAFLLGTSAEQCGRQAGGAVCPNGLCCSRFGWCGTTTEHCGTECQSQCSP 62

Query: 65  SGSTSPS-SGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL-------------- 124
            G+ SP+ SG GDV ++I+A++FDQ+LKYRND RC SNGFYT  +               
Sbjct: 63  GGTPSPTPSGVGDVSSIISASIFDQLLKYRNDGRCKSNGFYTYNAFIAAARSFSGFGTTG 122

Query: 125 -PLLDPLEALVLLETIIHV----------------------------------------- 184
              +   E    L    H                                          
Sbjct: 123 DANIRKREIAAFLGQTSHETTGGWSSAPDGPYAWGYCFITENNKADYCTSKDWPCAPGKQ 182

Query: 185 ---KGSLQL------------FWLKLLMRPLI-----------AIWFWMTPQRNKPSSHN 235
              +G +QL                L+  P +           AIWFWMTPQ NKPSSH+
Sbjct: 183 YYGRGPIQLTHNYNYGQAGKAIGADLINNPDLVATDPTISFKTAIWFWMTPQANKPSSHD 242

[Close]

BLAST of HG10016314 vs. TAIR 10
Match: AT3G12500.1 (basic chitinase )

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59
Identity = 132/309 (42.72%), Postives = 160/309 (51.78%), Query Frame = 0


Query: 11  ILLCFALWLG-GSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYC-AAGCQSQCRSSGST 70
           + L F+L L   SAEQCGRQAGGA+CPNGLCCS++GWCG T+PYC   GCQSQC   G  
Sbjct: 20  LFLIFSLLLSLSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGG-- 79

Query: 71  SPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL------------------- 130
           +P    GD+  +I+++ FD MLK+RND  CP+ GFYT  +                    
Sbjct: 80  TPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATR 139

Query: 131 --------------------------------------PLLDPLEALVLLETI----IHV 190
                                                 P  D  E             + 
Sbjct: 140 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYG 199

Query: 191 KGSLQLFW------------LKLLMRPLI-----------AIWFWMTPQRNKPSSHNIVI 234
           +G +QL W            + LL  P +           AIWFWMT Q  KPS H ++ 
Sbjct: 200 RGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIA 259

[Close]

BLAST of HG10016314 vs. TAIR 10
Match: AT4G01700.1 (Chitinase family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 145 AIWFWMTPQRNKPSSHNIVIDNWQPSDADRAAGRVPGYDVITNIINGGLECGHGLDNRVA 204
           A+WFWMT Q  KPS HN++++ ++P+ ADRAA R  GY ++TNIINGGLECG   D RV 
Sbjct: 191 ALWFWMTEQTPKPSCHNVMVNRYRPTKADRAANRTVGYGLVTNIINGGLECGIPGDGRVT 250

Query: 205 DRIGFYKKYCDILGVSYGNNLDCYNQQPFA 235
           DR+G++++Y  +  V+ G NLDC NQ+PF+
Sbjct: 251 DRVGYFQRYAQLFKVTTGPNLDCENQRPFS 280

[Close]

BLAST of HG10016314 vs. TAIR 10
Match: AT1G02360.1 (Chitinase family protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.6e-26
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 145 AIWFWMTPQRNKPSSHNIVIDNWQPSDADRAAGRVPGYDVITNIINGGLECGHGLDNRVA 204
           A+WFWMTPQ  KPS H+++I  ++P+ AD AA R  G+ + TNIINGGLECG   D RV 
Sbjct: 183 ALWFWMTPQSPKPSCHDVMIGKYRPTAADLAANRTGGFGLTTNIINGGLECGIPGDGRVN 242

Query: 205 DRIGFYKKYCDILGVSYGNNLDCYNQQPFA 235
           DRIGF+++Y  +  V+ G NLDC NQ+P+A
Sbjct: 243 DRIGFFQRYTGLFKVATGPNLDCENQRPYA 272

[Close]

BLAST of HG10016314 vs. TAIR 10
Match: AT2G43590.1 (Chitinase family protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 75/292 (25.68%), Postives = 104/292 (35.62%), Query Frame = 0


Query: 6   KVYGLILLCFALWLGGSAEQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQS-QCRS 65
           K+  ++LLC    LG  +E    Q  G  C   LCCSQ+G+CG    YC  GC+S  CR 
Sbjct: 5   KISLVLLLCL---LGFFSETVKSQNCG--CAPNLCCSQFGYCGTDDAYCGVGCRSGPCRG 64

Query: 66  SGSTSPSSGGGDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL-----------PLLD 125
           SG+ +    GG VG+++T   F+ ++    +  C    FYT  S              + 
Sbjct: 65  SGTPT----GGSVGSIVTQGFFNNIINQAGN-GCAGKRFYTRDSFVNAANTFPNFANSVT 124

Query: 126 PLEALVLLETIIHV-----------------------------------KGSLQLFW--- 185
             E   +     H                                    +G +QL W   
Sbjct: 125 RREIATMFAHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYN 184

Query: 186 ---------LKLLMRPLI-----------AIWFWMTPQRNKPSSHNIVIDNWQPSDADRA 228
                    L LL +P +            +WFWM   R        V++          
Sbjct: 185 YGACGQSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRP-------VLNQ--------- 244

[Close]

BLAST of HG10016314 vs. TAIR 10
Match: AT2G43610.1 (Chitinase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 74/281 (26.33%), Postives = 108/281 (38.43%), Query Frame = 0


Query: 10  LILLCFALW-LGGSA--EQCGRQAGGAVCPNGLCCSQYGWCGATKPYCAAGCQS-QCRSS 69
           LI+  F L  + G+A  + CG       C   +CCS++G+CG TK YC  GCQS  C S 
Sbjct: 12  LIIFLFTLTIMTGTAFSQNCGTNG----CKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSK 71

Query: 70  GSTSPS---SGG------GDVGTVITAALFDQMLKYRNDTRCPSNGFYTLLSL------- 129
              +P+   SGG      G + +VIT A F+ ++  +  + CP+ GFYT  +        
Sbjct: 72  PKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMS-KVGSGCPAKGFYTRQAFIAAAESF 131

Query: 130 ----PLLDPLEALVLLETIIHVKGS--------------------------------LQL 189
                 +   E   +L    H  GS                                +Q+
Sbjct: 132 AAYKGTVAKREIAAMLAQFSHESGSFCYKEEIARGRYCSPSTTYPCQPGKNYYGRGPIQI 191

Query: 190 FWL-------KLLMRPLIAIWFWMTPQRNKPSSHNIVIDNWQPSDADRAAGRVPGYDVIT 228
            W        K L  PL+     +   R+   +    +  W  +     +    G+   T
Sbjct: 192 TWNYNYGAAGKFLGLPLLKDPDMVA--RSPTVAFQCAMWFWNKNVRPVLS---QGFGATT 251

The following BLAST results are available for this feature:

BLAST of HG10016314 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3952281.1	4.1e-71	50.16	hypothetical protein CMV_022148 [Castanea mollissima]	[more]
XP_030955250.1	1.7e-69	48.87	endochitinase-like [Quercus lobata]	[more]
KAE8076270.1	2.9e-69	48.10	hypothetical protein FH972_014933 [Carpinus fangiana]	[more]
KAF3972599.1	1.1e-68	47.35	hypothetical protein CMV_003921 [Castanea mollissima]	[more]
KAG2705397.1	1.9e-68	48.24	hypothetical protein I3760_05G051100 [Carya illinoinensis]	[more]

BLAST of HG10016314 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36907	1.5e-63	44.06	Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q39799	5.8e-60	43.17	Endochitinase 1 OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]
P19171	4.1e-58	42.72	Basic endochitinase B OS=Arabidopsis thaliana OX=3702 GN=CHI-B PE=1 SV=3	[more]
Q42993	5.4e-58	42.19	Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1	[more]
Q09023	9.2e-58	43.73	Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of HG10016314 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7N2L2R1	6.4e-70	49.36	Chitin-binding type-1 domain-containing protein OS=Quercus lobata OX=97700 PE=4 ...	[more]
A0A7N2L2C5	8.3e-70	48.87	Chitin-binding type-1 domain-containing protein OS=Quercus lobata OX=97700 PE=4 ...	[more]
A0A5N6REP0	1.4e-69	48.10	Chitin-binding type-1 domain-containing protein OS=Carpinus fangiana OX=176857 G...	[more]
A0A6J1BU42	2.1e-68	48.56	endochitinase A-like OS=Momordica charantia OX=3673 GN=LOC111005566 PE=4 SV=1	[more]
A0A2I4GDR0	1.3e-67	47.92	endochitinase-like OS=Juglans regia OX=51240 GN=LOC109007006 PE=4 SV=1	[more]

BLAST of HG10016314 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12500.1	2.9e-59	42.72	basic chitinase	[more]
AT4G01700.1	1.3e-27	54.44	Chitinase family protein	[more]
AT1G02360.1	5.6e-26	55.56	Chitinase family protein	[more]
AT2G43590.1	2.3e-11	25.68	Chitinase family protein	[more]
AT2G43610.1	8.7e-11	26.33	Chitinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001002	Chitin-binding, type 1	PRINTS	PR00451	CHITINBINDNG	coord: 48..55 score: 48.67 coord: 41..48 score: 79.0 coord: 33..41 score: 65.93
IPR001002	Chitin-binding, type 1	SMART	SM00270	ChitinBD_3	coord: 25..62 e-value: 9.0E-17 score: 71.7
IPR001002	Chitin-binding, type 1	PFAM	PF00187	Chitin_bind_1	coord: 25..62 e-value: 1.6E-14 score: 54.0
IPR001002	Chitin-binding, type 1	PROSITE	PS50941	CHIT_BIND_I_2	coord: 23..64 score: 11.039977
IPR036861	Endochitinase-like superfamily	GENE3D	3.30.60.10		coord: 23..63 e-value: 2.3E-17 score: 64.8
IPR036861	Endochitinase-like superfamily	SUPERFAMILY	57016	Plant lectins/antimicrobial peptides	coord: 25..68
None	No IPR available	GENE3D	1.10.530.10		coord: 145..233 e-value: 5.4E-41 score: 142.7
None	No IPR available	GENE3D	1.10.530.10		coord: 64..109 e-value: 2.3E-6 score: 29.4
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 10..105
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 145..234
None	No IPR available	PANTHER	PTHR22595:SF171	CHITINASE (CLASS IB) / HEVEIN	coord: 10..105 coord: 145..234
None	No IPR available	CDD	cd00325	chitinase_GH19	coord: 126..227 e-value: 1.18722E-37 score: 129.472
None	No IPR available	CDD	cd06921	ChtBD1_GH19_hevein	coord: 24..62 e-value: 1.88296E-18 score: 74.0628
IPR000726	Glycoside hydrolase, family 19, catalytic	PFAM	PF00182	Glyco_hydro_19	coord: 145..227 e-value: 4.2E-44 score: 151.1
IPR018371	Chitin-binding, type 1, conserved site	PROSITE	PS00026	CHIT_BIND_I_1	coord: 35..54
IPR023346	Lysozyme-like domain superfamily	SUPERFAMILY	53955	Lysozyme-like	coord: 143..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016314.1	HG10016314.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006032	chitin catabolic process
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0008061	chitin binding