HG10015463 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015463
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNL-type domain-containing protein
Location	Chr02: 26859350 .. 26861432 (-)
RNA-Seq Expression	HG10015463
Synteny	HG10015463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCTTCAACTCTTGGGAGACTCGGCGACATCCATCTATCAACCCATTCAAACCTATAGTCTTTTCGCAAGCAAACCCTAGCAATGGCGTCTTCATTAGGTGAATAATCAAATTCTTCTCTTCGTCCTCTCTGTATCTTCAATTTTTGTCTTCTTTATTATTCCTTTTATCTCTTTACACGAGCAAATTGAGCATTTCTTTTCCAGAAGTAGAAACTTCCCTACAGCACCAGTTACTCGGGAACGCGGAAATAAGGTGCTTACGGTTTCCAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATACGGTATGAGTTCCGTAATGAATCTTGAACTGAGCTAGAGATTCTTGAACTTATGTCTTGTATTTATCTTTCTTCGATTTGCAGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACATGTAACCAATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTATGAACGGGGGCTTGTTTTTGTTCAGGTACACCATTACATTTCAATGTTCTATTGTGATGAATGCTACGATCGATTTTGGAATTCTATCAAAGCATTTGATATGATGAACCATTTTGTATTAGCAATTCGAGTAAGCCAATCATTGTTCTTTCTTTTGCTTCAAACAATTGTGTGGATTTGTTCTGACTGAAAATATTGCAATACTATGAAATTACACTCTGAAACCCCAAGCTTCTGCAAACTTTTTTCAAGTTTAAGTATACACCATTCTTTTTGACTGGACTGCTGTAAATAACTCCTCTTGAAATCCCAATTTCTACAACTCATGAAGGGTGGATGGTCAACTGTGCATAGATATAGTTTTTTGCTATAATTCAAAAACATTCTTAGAAAATTAGTATTCATATTTCTCCTTATATGTCTAGAATTTGCGGGAAGATATTTTCTGCTTGTCTCTCGCCCTCTCTGTCTCTCTGTCTCTCTTTGAATTCTTATATAGAGTGAAGCAGCATCTTTCCGGTGGTTATAGAAATGTAACTACTTACAAAAAATGTCCCAATCATATCAAAGAAGAAATTAGAGAATATATGTCCAGGAAAAATGAACTGAAGGCTCAAAGAAATTTTGTACAATAAGTTGAAGATGTGGAACTCACTTTTGATGAGGAAGATGATGAGTTAAATTGTCCAAGGAAGAGGTCGTCATCAAGTCGAAGCCATAAAAAGATTGTTTAGGATCAGTTAAATCTTCTAGGCAGAAGCCAAAGAGTTCAGTAAATGCACAATCATAGTGAATGATGATGCTTATAAAAAAGAAATGAGGGAGCACGCATGTCTACCAGATGGTTTTATGATGCTGGAATACCCATAAATGCTTACAATTGTGATAGATTTGGTCCCATGATTGAAGCCAGATGGTTTCATGTTAGCAACGTCTAGCAAATTAGAATATATATTGTTGTTATGAGTTATGATAGAAACGAAATCGACAAGCAAAGAAAGCGTAAACATTAAAGAACGAGGCACCTGTGGAATTAGAGGGTTTATATATAACACCCCTTTAAACCTTAGTTCCAAAATCGTAAATTACATATAATTTATATACAATTTAGATTTCATAGCTGCAGACAACGAATTCAAGGTTTTGCAACATTTATAATGGCAAACTCTAACAAAGAAGGAAAAACAATGGGTCTAATATTTGAAGATGCTAAGCCAATTGTTTCTTCCCCGTCCCATATAGTGCTTAAGTTTAAGATAACAATAACAATAATAATTGTTTCTTGCAGTTCTGTAGGACCTTTTGATCTCTAAATCCTTGCGATAGTTGGTTGTTTTTATCGTAGTAAATGCTGTTCATTGTTTCTTAATTTGGGTGTTTGATGCTTCCAATTAATATTTTGTACAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAATATGACTTTCGGGAGGAGAACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

mRNA sequence

ATGGCCGTGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCTTCAACTCTTGGGAGACTCGGCGACATCCATCTATCAACCCATTCAAACCTATAGTCTTTTCGCAAGCAAACCCTAGCAATGGCGTCTTCATTAGAAGTAGAAACTTCCCTACAGCACCAGTTACTCGGGAACGCGGAAATAAGGTGCTTACGGTTTCCAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATACGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACATGTAACCAATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTATGAACGGGGGCTTGTTTTTGTTCAGGTACACCATTACATTTCAATGTTCTATTGTGATGAATGCTACGATCGATTTTGGAATTCTATCAAAGCATTTGATATGATGAACCATTTTGTATTAGCAATTCGATGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAATATGACTTTCGGGAGGAGAACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

Coding sequence (CDS)

ATGGCCGTGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCTTCAACTCTTGGGAGACTCGGCGACATCCATCTATCAACCCATTCAAACCTATAGTCTTTTCGCAAGCAAACCCTAGCAATGGCGTCTTCATTAGAAGTAGAAACTTCCCTACAGCACCAGTTACTCGGGAACGCGGAAATAAGGTGCTTACGGTTTCCAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATACGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACATGTAACCAATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTATGAACGGGGGCTTGTTTTTGTTCAGGTACACCATTACATTTCAATGTTCTATTGTGATGAATGCTACGATCGATTTTGGAATTCTATCAAAGCATTTGATATGATGAACCATTTTGTATTAGCAATTCGATGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAATATGACTTTCGGGAGGAGAACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

Protein sequence

MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

Homology

[Close]

BLAST of HG10015463 vs. NCBI nr
Match: XP_038891803.1 (uncharacterized protein C24H6.02c [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 8.5e-73
Identity = 152/205 (74.15%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKTV+FSSPALLH SFNS ETR   SIN FK I+FS+ANPSNGVFIRSRNF T PVT
Sbjct: 1   MAAAKTVYFSSPALLHHSFNSSETRPLSSINSFKSILFSKANPSNGVFIRSRNFRTVPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RER  KVLTVSRLVDGYPGDDDESAQRNSDT AAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RERRYKVLTVSRLVDGYPGDDDESAQRNSDTAAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE+MD+DSNSDQV
Sbjct: 181 DNLGLIVEYDFREEDMDMDSNSDQV 170

[Close]

BLAST of HG10015463 vs. NCBI nr
Match: XP_008446529.1 (PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA0034513.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa] >TYK09067.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 2.0e-69
Identity = 146/205 (71.22%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R R  KVLTVS LVDGY GDDDES+QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE+ D+DSNSDQV
Sbjct: 181 DNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of HG10015463 vs. NCBI nr
Match: XP_004135125.1 (uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypothetical protein Csa_008252 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-68
Identity = 144/205 (70.24%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA A TV FSSP LL  SFN  +TR HPSI  FKPIV S+ANPSNGVFIRSRNF TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RER  KVLTVS LVDGY GDDDE +QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 124 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 173

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE++D+DS+SDQV
Sbjct: 184 DNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of HG10015463 vs. NCBI nr
Match: KAG7032119.1 (DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 143/205 (69.76%), Postives = 153/205 (74.63%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKT+ FSSPALL QSFN  +TR HPSIN F+PIV S+ANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RE  NKVLTVSRLVDG  GDDDESAQRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGC KYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCLKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFRE+++DV+SNSDQV
Sbjct: 181 DNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of HG10015463 vs. NCBI nr
Match: KAG6601335.1 (DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-67
Identity = 142/205 (69.27%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKT++FSSPALL QSFNS +TR HPSI  F+PIV S+ANPSN  FIRSR+F TAPVT
Sbjct: 1   MAAAKTLWFSSPALLQQSFNSSQTRPHPSIKAFRPIVSSKANPSNDFFIRSRSFRTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RE  NKVLTVSRLVDG  GDDDESAQRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGC KYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCLKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFRE+++DV+SNSDQV
Sbjct: 181 DNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of HG10015463 vs. ExPASy TrEMBL
Match: A0A5A7SVJ1 (Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00560 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.5e-70
Identity = 146/205 (71.22%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R R  KVLTVS LVDGY GDDDES+QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE+ D+DSNSDQV
Sbjct: 181 DNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of HG10015463 vs. ExPASy TrEMBL
Match: A0A1S3BG31 (uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.5e-70
Identity = 146/205 (71.22%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R R  KVLTVS LVDGY GDDDES+QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE+ D+DSNSDQV
Sbjct: 181 DNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of HG10015463 vs. ExPASy TrEMBL
Match: A0A0A0KR03 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.8e-68
Identity = 144/205 (70.24%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA A TV FSSP LL  SFN  +TR HPSI  FKPIV S+ANPSNGVFIRSRNF TAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RER  KVLTVS LVDGY GDDDE +QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 124 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 173

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE++D+DS+SDQV
Sbjct: 184 DNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of HG10015463 vs. ExPASy TrEMBL
Match: A0A6J1GZ90 (uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458229 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 143/205 (69.76%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKT  FSSPALL QSFN  +TR HPSIN F+PIV S+ANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RE  NKVLTVSRLVDG  GDDDESAQRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGC KYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCLKYHKLV 170

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFRE+++DV+SNSDQV
Sbjct: 181 DNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of HG10015463 vs. ExPASy TrEMBL
Match: A0A1S4DWZ3 (mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.4e-67
Identity = 144/205 (70.24%), Postives = 150/205 (73.17%), Query Frame = 0


Query: 1   MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVT 60
           MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFI  RNF TAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFI--RNFCTAPVT 60

Query: 61  RERGNKVLTVSRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R R  KVLTVS LVDGY GDDDES+QRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLV 180
           INRLAYERGLVFVQ                                   CAGCQKYHKLV
Sbjct: 121 INRLAYERGLVFVQ-----------------------------------CAGCQKYHKLV 168

Query: 181 DNLGLIVEYDFREENMDVDSNSDQV 206
           DNLGLIVEYDFREE+ D+DSNSDQV
Sbjct: 181 DNLGLIVEYDFREEDTDLDSNSDQV 168

[Close]

BLAST of HG10015463 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 79/204 (38.73%), Postives = 104/204 (50.98%), Query Frame = 0


Query: 3   VAKTVFFSSPAL--LHQSFNSWETRRHPSINPFKP--IVFSQANPSNGVFIRSRNFPTAP 62
           +A T    SP L  ++   N+     H S + +KP    + Q NP + +           
Sbjct: 1   MANTAAGWSPVLAPIYSPVNTKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEV 60

Query: 63  VTRERGNKVLTV-SRLVDGYPGDDDESAQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERT 122
           VT ++ N+  +V   L D    + DE +  +++  A+IDIKLPRRSL V FTCN C ERT
Sbjct: 61  VTPKQRNRSFSVFGSLADDSKLNPDEESNDSAEV-ASIDIKLPRRSLQVEFTCNSCGERT 120

Query: 123 KRLINRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYH 182
           KRLINR AYE+GLVFVQ                                   CAGC K+H
Sbjct: 121 KRLINRHAYEKGLVFVQ-----------------------------------CAGCLKHH 168

Query: 183 KLVDNLGLIVEYDFREENMDVDSN 202
           KLVDNLGLIVEYDFRE + D+ ++
Sbjct: 181 KLVDNLGLIVEYDFRETSKDLGTD 168

[Close]

BLAST of HG10015463 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 35/102 (34.31%), Postives = 40/102 (39.22%), Query Frame = 0


Query: 98  KLPRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQVHHYISMFYCDECYDRFWNSIKA 157
           K PRR + V FTCN C +RT R IN  AY  G VFVQ                       
Sbjct: 115 KSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQ----------------------- 174

Query: 158 FDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVD 200
                       C GC  +HKLVDNL L  E  +   +   D
Sbjct: 175 ------------CCGCNVFHKLVDNLNLFHEVKYYVSSSSFD 181

The following BLAST results are available for this feature:

BLAST of HG10015463 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891803.1	8.5e-73	74.15	uncharacterized protein C24H6.02c [Benincasa hispida]	[more]
XP_008446529.1	2.0e-69	71.22	PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA00345...	[more]
XP_004135125.1	3.7e-68	70.24	uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypot...	[more]
KAG7032119.1	1.1e-67	69.76	DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601335.1	1.4e-67	69.27	DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10015463 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10015463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVJ1	9.5e-70	71.22	Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3BG31	9.5e-70	71.22	uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0KR03	1.8e-68	70.24	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE...	[more]
A0A6J1GZ90	1.2e-67	69.76	uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S4DWZ3	3.4e-67	70.24	mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of HG10015463 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68730.1	1.1e-25	38.73	Zim17-type zinc finger protein	[more]
AT5G27280.1	4.6e-08	34.31	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 106..134 e-value: 5.8E-7 score: 29.4 coord: 141..188 e-value: 1.0E-4 score: 22.2
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 99..205 score: 9.881968
None	No IPR available	PANTHER	PTHR20922:SF19	F24J5.3	coord: 21..204
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 21..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015463.1	HG10015463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding