HG10012721.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10012721.1
TypemRNA
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionearly light-induced protein 1, chloroplastic
LocationChr01: 23680788 .. 23681567 (-)
Sequence length576
RNA-Seq ExpressionHG10012721.1
SyntenyHG10012721.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTCTGCAATGATGCTATCCGTGCCGGCAAGTTCGGCTAGTCGAGGTGTTTACAGGACATCAACGAATCGCCTTCTCCCGGCGGCGGTTCGTCCGTGCTCCCGGAGTACGGCCTCCTTTCGAGTGCGATGCACGGCGGAGGTATTCCCATGGCTATTCCATTTTCCTTGTGACTGATTGCACTTCTATTTTTGTAATTGAACTTTCTAGGGCTTTAATCGTGGTGTAATCTGTTTTTTCTGCTTTGATTTTCAGGAGGATCAGAGAGAGCAAGCGATTCCTACATCGATCCCACCGTCATCTCTCAAACCAGAGCCATCTCCCTCGTCACCACCAAAGGTAATTGAACCTGCAACATCACTGGCTGTATTTCGATTAACAGATCGAAACGAAATAGACCGTTAACTAGAGATCTGGCAATTTCCGCAGGTGAGTACGAAATTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGACGGCTTGCGATGATCGGCTTCGTGGCTGCTCTAGCGGTTGAAGTATTGAAGGGGCAGGACGTGTTCGAGCAAATAGCGAACGGAGGGATTCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCTTTGATTCCATTGTTTAAAGGAGTAAGCGCTGAGTCAAACTCGAAGGGGATTATGAATTCGAACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGCCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

mRNA sequence

ATGGCCGCTTCTGCAATGATGCTATCCGTGCCGGCAAGTTCGGCTAGTCGAGGTGTTTACAGGACATCAACGAATCGCCTTCTCCCGGCGGCGGTTCGTCCGTGCTCCCGGAGTACGGCCTCCTTTCGAGTGCGATGCACGGCGGAGGAGGATCAGAGAGAGCAAGCGATTCCTACATCGATCCCACCGTCATCTCTCAAACCAGAGCCATCTCCCTCGTCACCACCAAAGGTGAGTACGAAATTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGACGGCTTGCGATGATCGGCTTCGTGGCTGCTCTAGCGGTTGAAGTATTGAAGGGGCAGGACGTGTTCGAGCAAATAGCGAACGGAGGGATTCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCTTTGATTCCATTGTTTAAAGGAGTAAGCGCTGAGTCAAACTCGAAGGGGATTATGAATTCGAACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGCCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

Coding sequence (CDS)

ATGGCCGCTTCTGCAATGATGCTATCCGTGCCGGCAAGTTCGGCTAGTCGAGGTGTTTACAGGACATCAACGAATCGCCTTCTCCCGGCGGCGGTTCGTCCGTGCTCCCGGAGTACGGCCTCCTTTCGAGTGCGATGCACGGCGGAGGAGGATCAGAGAGAGCAAGCGATTCCTACATCGATCCCACCGTCATCTCTCAAACCAGAGCCATCTCCCTCGTCACCACCAAAGGTGAGTACGAAATTCACAGACATTTTGGCGTTCAGCGGGCCAGGGCCAGAGAGGATCAACGGACGGCTTGCGATGATCGGCTTCGTGGCTGCTCTAGCGGTTGAAGTATTGAAGGGGCAGGACGTGTTCGAGCAAATAGCGAACGGAGGGATTCCATGGTTTGTGGGAACGAGCGTGGTTCTGACATTGGCATCTTTGATTCCATTGTTTAAAGGAGTAAGCGCTGAGTCAAACTCGAAGGGGATTATGAATTCGAACGCGGAGCTGTGGAATGGGAGGTTTGCGATGTTGGGCCTTGTTGCTTTGGCCTTCACTGAATATGTTAAAGGTGGAAGCCTTGTGTAA

Protein sequence

MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTSIPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALAFTEYVKGGSLV
Homology
BLAST of HG10012721.1 vs. NCBI nr
Match: XP_038880321.1 (early light-induced protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 328.6 bits (841), Expect = 3.7e-86
Identity = 176/193 (91.19%), Postives = 182/193 (94.30%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+PASSA+RG+ RTSTNRLLPAA+RP SR  ASFRVRCTAEEDQREQ I TS
Sbjct: 1   MAASAVMQSIPASSANRGISRTSTNRLLPAAIRPYSRRMASFRVRCTAEEDQREQPISTS 60

Query: 61  IPPSSLKPE--PSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQD 120
           IPPSSLKPE  PSPS PPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVE LKGQD
Sbjct: 61  IPPSSLKPEPTPSPSPPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVETLKGQD 120

Query: 121 VFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVA 180
           VFEQIANGGIPWFVGTSVVLTLASLIPLF+GVSAESNSKGIMNSNAELWNGRFAMLGLVA
Sbjct: 121 VFEQIANGGIPWFVGTSVVLTLASLIPLFRGVSAESNSKGIMNSNAELWNGRFAMLGLVA 180

Query: 181 LAFTEYVKGGSLV 192
           LAFTEYVKGGSLV
Sbjct: 181 LAFTEYVKGGSLV 193

BLAST of HG10012721.1 vs. NCBI nr
Match: XP_004134120.1 (early light-induced protein 1, chloroplastic [Cucumis sativus] >KGN56941.1 hypothetical protein Csa_009586 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83
Identity = 171/192 (89.06%), Postives = 182/192 (94.79%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+ +++A+RGVYRT+TNRLLPAA+RPCSRSTA+FRVRC AEEDQREQAIP+S
Sbjct: 1   MAASAVMQSILSTTATRGVYRTTTNRLLPAALRPCSRSTAAFRVRCMAEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  KPEPSPS P KV STK TDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKPEPSPSPPSKVTSTKLTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. NCBI nr
Match: KAA0049329.1 (early light-induced protein 1 [Cucumis melo var. makuwa] >TYK17229.1 early light-induced protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 172/192 (89.58%), Postives = 182/192 (94.79%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+P+S+ASRGVYRT+TNRLLPAAVR CSR+T +FRVRCTAEEDQREQAIP+S
Sbjct: 1   MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTAEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  K EP+PSS  KV STKFTDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKLEPAPSSTSKVTSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. NCBI nr
Match: XP_008438620.1 (PREDICTED: early light-induced protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 5.0e-83
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+P+S+ASRGVYRT+TNRLLPAAVR CSR+T +FRVRCT EEDQREQAIP+S
Sbjct: 1   MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTGEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  K EP+PSS  KV STKFTDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKLEPAPSSTSKVTSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. NCBI nr
Match: XP_022974396.1 (early light-induced protein 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 147/191 (76.96%), Postives = 160/191 (83.77%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MA SA++ ++P SSASR  +RT TNRL       CSR TASFRVRCTAEE+QREQAIPT 
Sbjct: 1   MATSALLQAIPVSSASRTTFRTPTNRL-------CSRRTASFRVRCTAEEEQREQAIPTP 60

Query: 61  IPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVF 120
            PP+S    P PS  PKVSTKF+D+LAFSGP PERINGRLAMIGFVAA+AVE  KGQDV 
Sbjct: 61  APPTSNPSPPPPSPKPKVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVAVEAWKGQDVL 120

Query: 121 EQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALA 180
           EQI NGGIPWFVGTSVVLTLASLIPLFKGVS ES SKG+M S+AELWNGRFAMLGLVALA
Sbjct: 121 EQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGRFAMLGLVALA 180

Query: 181 FTEYVKGGSLV 192
           FTE+VKGGSLV
Sbjct: 181 FTEFVKGGSLV 184

BLAST of HG10012721.1 vs. ExPASy Swiss-Prot
Match: P93735 (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-50
Identity = 106/176 (60.23%), Postives = 129/176 (73.30%), Query Frame = 0

Query: 21  RTSTNRLLPAAVRPCSRSTASFRVRCTAE-----EDQREQAIPTSIPPSSLKPEPSPSSP 80
           + +TN+L  A   P  +      VRC AE     ED       ++  P    P P P   
Sbjct: 20  KINTNKLFSAGSFPNLKRNYPVGVRCMAEGGPTNEDSSPAPSTSAAQPLPKSPSPPPPMK 79

Query: 81  PKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVFEQIANGGIPWFVGTS 140
           PKVSTKF+D+LAFSGP PERINGRLAM+GFVAALAVE+ KG++V  QI++GG+ WF+GT+
Sbjct: 80  PKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENVLAQISDGGVSWFLGTT 139

Query: 141 VVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALAFTEYVKGGSLV 192
            +LTLASL+PLFKG+S ES SKGIM S+AELWNGRFAMLGLVALAFTE+VKGG+LV
Sbjct: 140 AILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 195

BLAST of HG10012721.1 vs. ExPASy Swiss-Prot
Match: P11432 (Early light-induced protein, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 0

Query: 2   AASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQA----I 61
           +  ++M +   + +SR      TN  +P+   P  R   S +VR  AE + +EQ+     
Sbjct: 5   SCQSIMSNSMTNISSRSRVNQFTN--IPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVD 64

Query: 62  PTSIPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQ 121
           PT+   S+  P+P+ + PPK+STKF+D++AFSGP PERINGRLAMIGFVAA+ VE+ KGQ
Sbjct: 65  PTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQ 124

Query: 122 DVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLV 181
            + EQ++ GG+ WF+GTSV+L+LASLIP F+GVS ES SK IM+S+AE WNGR AMLGLV
Sbjct: 125 GLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLV 184

Query: 182 ALAFTEYVKGGSLV 192
           ALAFTE+VKG SLV
Sbjct: 185 ALAFTEFVKGTSLV 196

BLAST of HG10012721.1 vs. ExPASy Swiss-Prot
Match: Q94K66 (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.0e-47
Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = 0

Query: 3   ASAMMLSVPASSASRGVYRT----STNRLLPAAVRPCSRSTASFRVRCTAEED--QREQA 62
           AS  M SV A  A  GV  T    +TN+L    + P         VRC A+ D  + + +
Sbjct: 4   ASFNMQSVFA--APSGVLTTRNIRNTNQLFFKRIAPVG-------VRCMAQGDPIKEDPS 63

Query: 63  IP----TSIPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVE 122
           +P    ++ PP   +  P P S PKVSTKF D+LAFSGP PERINGRLAM+GFVAA+A+E
Sbjct: 64  VPSTSTSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAME 123

Query: 123 VLKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFA 182
           + KG++VF QI++GG+ WF+GT+ +LTLAS++PLFKG+ AE+ SKG M S+AELWNGRFA
Sbjct: 124 LSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFA 183

Query: 183 MLGLVALAFTEYVKGGSLV 192
           MLGLVALAFTEYV GG+LV
Sbjct: 184 MLGLVALAFTEYVTGGTLV 193

BLAST of HG10012721.1 vs. ExPASy Swiss-Prot
Match: Q01931 (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum OX=4153 GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-35
Identity = 91/198 (45.96%), Postives = 124/198 (62.63%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRG---VYRTSTNRLL---PAAVRPCSRSTASFRVRCTAEEDQR- 60
           MA+S    ++PA S  RG   + R   N L     +   P  R  A F VR   E++++ 
Sbjct: 1   MASSTCYATIPAMSC-RGQSTITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKE 60

Query: 61  EQAIPTSIPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEV 120
           EQ            P+ +P+     + +  D+ +F G  PERINGR AMIGFVAA+ VE+
Sbjct: 61  EQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVEL 120

Query: 121 LKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAM 180
             G+DVF Q+ NGG+ WF+ TS VL LA+LIP+++G+S E+ + G  NS+AE+WNGRFAM
Sbjct: 121 ATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAM 180

Query: 181 LGLVALAFTEYVKGGSLV 192
           +GLVALAFTEYVKGG L+
Sbjct: 181 IGLVALAFTEYVKGGPLI 197

BLAST of HG10012721.1 vs. ExPASy Swiss-Prot
Match: P14897 (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-32
Identity = 72/125 (57.60%), Postives = 87/125 (69.60%), Query Frame = 0

Query: 68  PEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVFEQIANG- 127
           P   P + PK ST   D +AFSGP PERINGRLAM+GFV ALAVE  +G  +  Q+ +G 
Sbjct: 46  PSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGT 105

Query: 128 GIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALAFTEYVK 187
           G  WF  T  VL++ASL+PL +G SAE  +  IMN+NAELWNGRFAMLGLVALA TE + 
Sbjct: 106 GQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIIT 165

Query: 188 GGSLV 192
           G   +
Sbjct: 166 GAPFI 170

BLAST of HG10012721.1 vs. ExPASy TrEMBL
Match: A0A0A0LA49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145780 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.9e-84
Identity = 171/192 (89.06%), Postives = 182/192 (94.79%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+ +++A+RGVYRT+TNRLLPAA+RPCSRSTA+FRVRC AEEDQREQAIP+S
Sbjct: 1   MAASAVMQSILSTTATRGVYRTTTNRLLPAALRPCSRSTAAFRVRCMAEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  KPEPSPS P KV STK TDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKPEPSPSPPSKVTSTKLTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. ExPASy TrEMBL
Match: A0A5D3D3B2 (Early light-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00800 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.3e-84
Identity = 172/192 (89.58%), Postives = 182/192 (94.79%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+P+S+ASRGVYRT+TNRLLPAAVR CSR+T +FRVRCTAEEDQREQAIP+S
Sbjct: 1   MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTAEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  K EP+PSS  KV STKFTDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKLEPAPSSTSKVTSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. ExPASy TrEMBL
Match: A0A1S3AXH6 (early light-induced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483676 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+P+S+ASRGVYRT+TNRLLPAAVR CSR+T +FRVRCT EEDQREQAIP+S
Sbjct: 1   MAASAVMQSIPSSTASRGVYRTTTNRLLPAAVRLCSRNTGAFRVRCTGEEDQREQAIPSS 60

Query: 61  IPPSSLKPEPSPSSPPKV-STKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDV 120
           IPPS  K EP+PSS  KV STKFTDILAFSGPGPERINGRLAMIGFVAALAVEV KGQDV
Sbjct: 61  IPPSPPKLEPAPSSTSKVTSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVSKGQDV 120

Query: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVAL 180
           FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIM+SNAELWNGRFAMLGLVAL
Sbjct: 121 FEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMSSNAELWNGRFAMLGLVAL 180

Query: 181 AFTEYVKGGSLV 192
           AFTEYVKGGSLV
Sbjct: 181 AFTEYVKGGSLV 192

BLAST of HG10012721.1 vs. ExPASy TrEMBL
Match: A0A6J1IB88 (early light-induced protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473077 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 147/191 (76.96%), Postives = 160/191 (83.77%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MA SA++ ++P SSASR  +RT TNRL       CSR TASFRVRCTAEE+QREQAIPT 
Sbjct: 1   MATSALLQAIPVSSASRTTFRTPTNRL-------CSRRTASFRVRCTAEEEQREQAIPTP 60

Query: 61  IPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVF 120
            PP+S    P PS  PKVSTKF+D+LAFSGP PERINGRLAMIGFVAA+AVE  KGQDV 
Sbjct: 61  APPTSNPSPPPPSPKPKVSTKFSDVLAFSGPAPERINGRLAMIGFVAAVAVEAWKGQDVL 120

Query: 121 EQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALA 180
           EQI NGGIPWFVGTSVVLTLASLIPLFKGVS ES SKG+M S+AELWNGRFAMLGLVALA
Sbjct: 121 EQIGNGGIPWFVGTSVVLTLASLIPLFKGVSVESKSKGLMTSDAELWNGRFAMLGLVALA 180

Query: 181 FTEYVKGGSLV 192
           FTE+VKGGSLV
Sbjct: 181 FTEFVKGGSLV 184

BLAST of HG10012721.1 vs. ExPASy TrEMBL
Match: A0A6J1GV79 (early light-induced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457488 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.9e-70
Identity = 146/191 (76.44%), Postives = 158/191 (82.72%), Query Frame = 0

Query: 1   MAASAMMLSVPASSASRGVYRTSTNRLLPAAVRPCSRSTASFRVRCTAEEDQREQAIPTS 60
           MAASA+M S+ ASSASR   RT  NRLLPAAVRP SR  A+FRVRCTAEEDQRE A P+S
Sbjct: 1   MAASAVMQSILASSASRNACRTPANRLLPAAVRPFSRRAANFRVRCTAEEDQREPATPSS 60

Query: 61  IPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVF 120
           +   S +P PSP+  PK+STK TDILAFSGP PERINGRLAM+GFVAALAVE  KGQDV 
Sbjct: 61  VSLPSPQPGPSPTPSPKMSTKLTDILAFSGPAPERINGRLAMVGFVAALAVEAAKGQDVL 120

Query: 121 EQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALA 180
           EQI NGGIPWFVGTS +LTLASLIP  +GVS ESNSKG M S AELWNGRFAMLGL+ALA
Sbjct: 121 EQIGNGGIPWFVGTSAILTLASLIPFIRGVSVESNSKGFMTSKAELWNGRFAMLGLLALA 180

Query: 181 FTEYVKGGSLV 192
           FTEYV GGSLV
Sbjct: 181 FTEYVTGGSLV 191

BLAST of HG10012721.1 vs. TAIR 10
Match: AT3G22840.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 106/176 (60.23%), Postives = 129/176 (73.30%), Query Frame = 0

Query: 21  RTSTNRLLPAAVRPCSRSTASFRVRCTAE-----EDQREQAIPTSIPPSSLKPEPSPSSP 80
           + +TN+L  A   P  +      VRC AE     ED       ++  P    P P P   
Sbjct: 20  KINTNKLFSAGSFPNLKRNYPVGVRCMAEGGPTNEDSSPAPSTSAAQPLPKSPSPPPPMK 79

Query: 81  PKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVEVLKGQDVFEQIANGGIPWFVGTS 140
           PKVSTKF+D+LAFSGP PERINGRLAM+GFVAALAVE+ KG++V  QI++GG+ WF+GT+
Sbjct: 80  PKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENVLAQISDGGVSWFLGTT 139

Query: 141 VVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFAMLGLVALAFTEYVKGGSLV 192
            +LTLASL+PLFKG+S ES SKGIM S+AELWNGRFAMLGLVALAFTE+VKGG+LV
Sbjct: 140 AILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 195

BLAST of HG10012721.1 vs. TAIR 10
Match: AT4G14690.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 188.7 bits (478), Expect = 4.2e-48
Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = 0

Query: 3   ASAMMLSVPASSASRGVYRT----STNRLLPAAVRPCSRSTASFRVRCTAEED--QREQA 62
           AS  M SV A  A  GV  T    +TN+L    + P         VRC A+ D  + + +
Sbjct: 4   ASFNMQSVFA--APSGVLTTRNIRNTNQLFFKRIAPVG-------VRCMAQGDPIKEDPS 63

Query: 63  IP----TSIPPSSLKPEPSPSSPPKVSTKFTDILAFSGPGPERINGRLAMIGFVAALAVE 122
           +P    ++ PP   +  P P S PKVSTKF D+LAFSGP PERINGRLAM+GFVAA+A+E
Sbjct: 64  VPSTSTSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAME 123

Query: 123 VLKGQDVFEQIANGGIPWFVGTSVVLTLASLIPLFKGVSAESNSKGIMNSNAELWNGRFA 182
           + KG++VF QI++GG+ WF+GT+ +LTLAS++PLFKG+ AE+ SKG M S+AELWNGRFA
Sbjct: 124 LSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFA 183

Query: 183 MLGLVALAFTEYVKGGSLV 192
           MLGLVALAFTEYV GG+LV
Sbjct: 184 MLGLVALAFTEYVTGGTLV 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880321.13.7e-8691.19early light-induced protein 1, chloroplastic [Benincasa hispida][more]
XP_004134120.11.0e-8389.06early light-induced protein 1, chloroplastic [Cucumis sativus] >KGN56941.1 hypot... [more]
KAA0049329.11.7e-8389.58early light-induced protein 1 [Cucumis melo var. makuwa] >TYK17229.1 early light... [more]
XP_008438620.15.0e-8389.06PREDICTED: early light-induced protein 1, chloroplastic [Cucumis melo][more]
XP_022974396.16.3e-7076.96early light-induced protein 1, chloroplastic-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P937352.0e-5060.23Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
P114321.6e-4754.64Early light-induced protein, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1[more]
Q94K666.0e-4755.78Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q019311.8e-3545.96Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum O... [more]
P148975.4e-3257.60Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum ... [more]
Match NameE-valueIdentityDescription
A0A0A0LA494.9e-8489.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145780 PE=4 SV=1[more]
A0A5D3D3B28.3e-8489.58Early light-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3AXH62.4e-8389.06early light-induced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1IB883.1e-7076.96early light-induced protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1GV798.9e-7076.44early light-induced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 ... [more]
Match NameE-valueIdentityDescription
AT3G22840.11.4e-5160.23Chlorophyll A-B binding family protein [more]
AT4G14690.14.2e-4855.78Chlorophyll A-B binding family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 149..183
e-value: 1.4E-4
score: 22.4
coord: 93..132
e-value: 3.3E-5
score: 24.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..79
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTICcoord: 1..181
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 1..181
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 70..187

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
HG10012721HG10012721gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
HG10012721.1-cdsHG10012721.1-cds-Chr01:23680788..23681132CDS
HG10012721.1-cdsHG10012721.1-cds-Chr01:23681223..23681306CDS
HG10012721.1-cdsHG10012721.1-cds-Chr01:23681421..23681567CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
HG10012721.1HG10012721.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009535 chloroplast thylakoid membrane