Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGGCGGAACAAATCTTTGATATTTGTAGGAATGGTCCTTATGTTGGTATGTCACTTGAAATTAGAGATTCCATCATAAGTTGCAAACCACGAAGACATATTCGAACTCGACGAAACTCATCAATATTTGTCAAACAAATCAACCTGAATTTCAAAGTTCAACTCAAATGCAGTCGCTACCAAATAGGTGAAGAAGGCAATAGAAATACAACTTTACTCGGTGAACACACAACTTCTGAATATCCCCTTGCAAATTACCGACTTCCTGTCTCTATCTTCAAGCGTCACGACAAAACTTTGGAGCAATATCTTTTTCACCAGTTTCAGATATATCGAGACTTCATCAACATCAAACTTGTGGCTGACAAAATAATACAACATTGGGTTAGAAAAGTCGAAGAAGAAGAAGAGAATGATTTTAATAATATATTTCAAAAGATTTATCCTCTCGAAATTACGTTAGAGATGTTGATTTTTTAA
mRNA sequence
ATGTCAATGGCGGAACAAATCTTTGATATTTGTAGGAATGGTCCTTATGTTGGTATGTCACTTGAAATTAGAGATTCCATCATAAGTTGCAAACCACGAAGACATATTCGAACTCGACGAAACTCATCAATATTTGTCAAACAAATCAACCTGAATTTCAAAGTTCAACTCAAATGCAGTCGCTACCAAATAGGTGAAGAAGGCAATAGAAATACAACTTTACTCGGTGAACACACAACTTCTGAATATCCCCTTGCAAATTACCGACTTCCTGTCTCTATCTTCAAGCGTCACGACAAAACTTTGGAGCAATATCTTTTTCACCAGTTTCAGATATATCGAGACTTCATCAACATCAAACTTGTGGCTGACAAAATAATACAACATTGGGTTAGAAAAGTCGAAGAAGAAGAAGAGAATGATTTTAATAATATATTTCAAAAGATTTATCCTCTCGAAATTACGTTAGAGATGTTGATTTTTTAA
Coding sequence (CDS)
ATGTCAATGGCGGAACAAATCTTTGATATTTGTAGGAATGGTCCTTATGTTGGTATGTCACTTGAAATTAGAGATTCCATCATAAGTTGCAAACCACGAAGACATATTCGAACTCGACGAAACTCATCAATATTTGTCAAACAAATCAACCTGAATTTCAAAGTTCAACTCAAATGCAGTCGCTACCAAATAGGTGAAGAAGGCAATAGAAATACAACTTTACTCGGTGAACACACAACTTCTGAATATCCCCTTGCAAATTACCGACTTCCTGTCTCTATCTTCAAGCGTCACGACAAAACTTTGGAGCAATATCTTTTTCACCAGTTTCAGATATATCGAGACTTCATCAACATCAAACTTGTGGCTGACAAAATAATACAACATTGGGTTAGAAAAGTCGAAGAAGAAGAAGAGAATGATTTTAATAATATATTTCAAAAGATTTATCCTCTCGAAATTACGTTAGAGATGTTGATTTTTTAA
Protein sequence
MSMAEQIFDICRNGPYVGMSLEIRDSIISCKPRRHIRTRRNSSIFVKQINLNFKVQLKCSRYQIGEEGNRNTTLLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIKLVADKIIQHWVRKVEEEEENDFNNIFQKIYPLEITLEMLIF
Homology
BLAST of HG10018777 vs. NCBI nr
Match:
KAA0031411.1 (putative zinc finger protein [Cucumis melo var. makuwa])
HSP 1 Score: 199.9 bits (507), Expect = 1.7e-47
Identity = 107/168 (63.69%), Postives = 131/168 (77.98%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIF+ICRN P+VGMSLEI DSI S + R+ IRTR+NSS +V+ I+LNFKVQLKCS
Sbjct: 1 MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
Query: 63 YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIK 122
+ + E+G TT L EHT+ +PLA Y+LP+SIFK DK LEQYLFH+F +YR+FINI
Sbjct: 61 FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120
Query: 123 LVADKIIQHWVRKVEE-----EEEN---DFNNIFQKIYPLEITLEMLI 161
LVAD++IQHWV++VEE +EEN DF N+FQKIYPLEITLEM I
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDF-NVFQKIYPLEITLEMQI 167
BLAST of HG10018777 vs. NCBI nr
Match:
TYK06862.1 (putative zinc finger protein [Cucumis melo var. makuwa])
HSP 1 Score: 198.0 bits (502), Expect = 6.3e-47
Identity = 106/168 (63.10%), Postives = 130/168 (77.38%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIF+ICRN P+VGMSLEI DSI S + R+ IRTR+NSS +V+ I+LNFKVQLKCS
Sbjct: 1 MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
Query: 63 YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIK 122
+ + E+G TT L EHT+ +PLA Y+LP+SIFK DK LEQYLFH+F +YR+FIN
Sbjct: 61 FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
Query: 123 LVADKIIQHWVRKVEE-----EEEN---DFNNIFQKIYPLEITLEMLI 161
LVAD++IQHWV++VEE +EEN DF N+FQKIYPLEITLEM I
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDF-NVFQKIYPLEITLEMRI 167
BLAST of HG10018777 vs. NCBI nr
Match:
KAA0044491.1 (putative zinc finger protein [Cucumis melo var. makuwa] >TYK29618.1 putative zinc finger protein [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 4.7e-42
Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISCKPRRHIRTRRNSSIFVKQINLNFKVQLKCSRY 62
MAE+I D CR G Y+GMSL I D ++ +PR IRTRRNS FVK+++LNFK+QLKC +
Sbjct: 1 MAEEIIDTCRYGYYMGMSLRIIDPVLRRQPRNQIRTRRNSPTFVKRMDLNFKLQLKCQHF 60
Query: 63 QIGE-EGNRN-TTLLGEHTTSEYPLANYRL-PVSIFKRHDKTLEQYLFHQFQIYRDFINI 122
QI E EGN N TTLL EH +S++ LA L P+SIFK D+TL++ LF +FQ+YRD INI
Sbjct: 61 QICEIEGNTNTTTLLSEHISSQHALATLELIPISIFKHGDRTLKRLLFLEFQMYRDIINI 120
Query: 123 KLVADKIIQHWVRKVEEEEENDFNNIFQKIYPLEITLEMLIF 162
+LV DKII HWV K+EE++EN +F+KIYPLEI LE+++F
Sbjct: 121 ELVVDKIINHWVNKIEEDQENSC-RVFRKIYPLEIVLELVVF 161
BLAST of HG10018777 vs. NCBI nr
Match:
XP_011659722.2 (uncharacterized protein LOC105436242 [Cucumis sativus])
HSP 1 Score: 174.9 bits (442), Expect = 5.7e-40
Identity = 98/169 (57.99%), Postives = 124/169 (73.37%), Query Frame = 0
Query: 2 SMAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCS 61
SMA QIFD+C N P+VGMSL+I+DSI S + R+ IRTRRNSS +V+ I+LNFKVQL+C+
Sbjct: 15 SMAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCT 74
Query: 62 R-YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFIN 121
Q E+G TT L EHT+S +PLA Y+LP+SIFK + TLEQYL + +R+ I+
Sbjct: 75 HVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELID 134
Query: 122 IKLVADKIIQHWVRKVE-------EEEENDFNNIFQKIYPLEITLEMLI 161
I LVAD+IIQHWV+KVE EEE N+ N+FQKI+ LEITLEM I
Sbjct: 135 ITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKI 183
BLAST of HG10018777 vs. NCBI nr
Match:
KGN43806.1 (hypothetical protein Csa_017341 [Cucumis sativus])
HSP 1 Score: 172.9 bits (437), Expect = 2.2e-39
Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIFD+C N P+VGMSL+I+DSI S + R+ IRTRRNSS +V+ I+LNFKVQL+C+
Sbjct: 1 MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
Query: 63 -YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINI 122
Q E+G TT L EHT+S +PLA Y+LP+SIFK + TLEQYL + +R+ I+I
Sbjct: 61 VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
Query: 123 KLVADKIIQHWVRKVE-------EEEENDFNNIFQKIYPLEITLEMLI 161
LVAD+IIQHWV+KVE EEE N+ N+FQKI+ LEITLEM I
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKI 168
BLAST of HG10018777 vs. ExPASy TrEMBL
Match:
A0A5A7SPE2 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001670 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 8.1e-48
Identity = 107/168 (63.69%), Postives = 131/168 (77.98%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIF+ICRN P+VGMSLEI DSI S + R+ IRTR+NSS +V+ I+LNFKVQLKCS
Sbjct: 1 MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
Query: 63 YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIK 122
+ + E+G TT L EHT+ +PLA Y+LP+SIFK DK LEQYLFH+F +YR+FINI
Sbjct: 61 FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120
Query: 123 LVADKIIQHWVRKVEE-----EEEN---DFNNIFQKIYPLEITLEMLI 161
LVAD++IQHWV++VEE +EEN DF N+FQKIYPLEITLEM I
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDF-NVFQKIYPLEITLEMQI 167
BLAST of HG10018777 vs. ExPASy TrEMBL
Match:
A0A5D3C6D9 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001660 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 3.1e-47
Identity = 106/168 (63.10%), Postives = 130/168 (77.38%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIF+ICRN P+VGMSLEI DSI S + R+ IRTR+NSS +V+ I+LNFKVQLKCS
Sbjct: 1 MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
Query: 63 YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIK 122
+ + E+G TT L EHT+ +PLA Y+LP+SIFK DK LEQYLFH+F +YR+FIN
Sbjct: 61 FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
Query: 123 LVADKIIQHWVRKVEE-----EEEN---DFNNIFQKIYPLEITLEMLI 161
LVAD++IQHWV++VEE +EEN DF N+FQKIYPLEITLEM I
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDF-NVFQKIYPLEITLEMRI 167
BLAST of HG10018777 vs. ExPASy TrEMBL
Match:
A0A5D3E1H7 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002290 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42
Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISCKPRRHIRTRRNSSIFVKQINLNFKVQLKCSRY 62
MAE+I D CR G Y+GMSL I D ++ +PR IRTRRNS FVK+++LNFK+QLKC +
Sbjct: 1 MAEEIIDTCRYGYYMGMSLRIIDPVLRRQPRNQIRTRRNSPTFVKRMDLNFKLQLKCQHF 60
Query: 63 QIGE-EGNRN-TTLLGEHTTSEYPLANYRL-PVSIFKRHDKTLEQYLFHQFQIYRDFINI 122
QI E EGN N TTLL EH +S++ LA L P+SIFK D+TL++ LF +FQ+YRD INI
Sbjct: 61 QICEIEGNTNTTTLLSEHISSQHALATLELIPISIFKHGDRTLKRLLFLEFQMYRDIINI 120
Query: 123 KLVADKIIQHWVRKVEEEEENDFNNIFQKIYPLEITLEMLIF 162
+LV DKII HWV K+EE++EN +F+KIYPLEI LE+++F
Sbjct: 121 ELVVDKIINHWVNKIEEDQENSC-RVFRKIYPLEIVLELVVF 161
BLAST of HG10018777 vs. ExPASy TrEMBL
Match:
A0A0A0K7L5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIISC-KPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MA QIFD+C N P+VGMSL+I+DSI S + R+ IRTRRNSS +V+ I+LNFKVQL+C+
Sbjct: 1 MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
Query: 63 -YQIGEEGNRNTT-LLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINI 122
Q E+G TT L EHT+S +PLA Y+LP+SIFK + TLEQYL + +R+ I+I
Sbjct: 61 VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
Query: 123 KLVADKIIQHWVRKVE-------EEEENDFNNIFQKIYPLEITLEMLI 161
LVAD+IIQHWV+KVE EEE N+ N+FQKI+ LEITLEM I
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKI 168
BLAST of HG10018777 vs. ExPASy TrEMBL
Match:
A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 0
Query: 3 MAEQIFDICRNGPYVGMSLEIRDSIIS-CKPRRHIRTRRNSSIFVKQINLNFKVQLKCSR 62
MAE+IFD CR G Y+GM L I D + +P+ IRTRRNS F KQI+LNF+VQLKC
Sbjct: 1 MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60
Query: 63 YQIGEEGNRN-TTLLGEHTTSEYPLANYRLPVSIFKRHDKTLEQYLFHQFQIYRDFINIK 122
+QI EE N TTL+ EH S++P A +RLP+SI + DKTL+ LF +F +YRD INI+
Sbjct: 61 FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120
Query: 123 LVADKIIQHWVRKVEEEEENDFNN----IFQKIYPLEITLEMLIF 162
+ D+II++WV KVEEEEE+ N+ +F+KIY LEITLE+LIF
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIF 165
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0031411.1 | 1.7e-47 | 63.69 | putative zinc finger protein [Cucumis melo var. makuwa] | [more] |
TYK06862.1 | 6.3e-47 | 63.10 | putative zinc finger protein [Cucumis melo var. makuwa] | [more] |
KAA0044491.1 | 4.7e-42 | 58.64 | putative zinc finger protein [Cucumis melo var. makuwa] >TYK29618.1 putative zin... | [more] |
XP_011659722.2 | 5.7e-40 | 57.99 | uncharacterized protein LOC105436242 [Cucumis sativus] | [more] |
KGN43806.1 | 2.2e-39 | 57.74 | hypothetical protein Csa_017341 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SPE2 | 8.1e-48 | 63.69 | Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
A0A5D3C6D9 | 3.1e-47 | 63.10 | Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A5D3E1H7 | 2.3e-42 | 58.64 | Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A0A0K7L5 | 1.1e-39 | 57.74 | RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 P... | [more] |
A0A0A0K2A5 | 1.8e-39 | 55.76 | RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P... | [more] |
Match Name | E-value | Identity | Description | |