HG10013552 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAGTCTGAATCGCTGCCGGAATCTGAATCTGAATCGCAGCTCTCAGTTCTCATATTCGGTACGTTTCTTTGCTTTGCTTCCCTTTCTCTTTCTCTCTAATGCACACATTCAAAGGCGCCAAAAACGCTAACTACTATACGCTTTCTCGCAATGAAAATCTGCCTGCCTGACATTGTTTGGCGAGGTTATTTGTTAGATTTTGTCGCACCTATTGTGAAAAATTGGCATTGTTAATCGTCTTCTACTTATGCTTAAAGAAGTAAGAAATGCTATAAGATCAAACTCTAGCTAGCTGATGAAATTTCTCTCGATCGCATTCTATAATGTTCGACTGGAAACACCGATTAGGTTAACTTTATTCGCTTCTGATATTATGAGTTCGTGTAGGACGAATCCGAAATAGATAGAGGTTGTTTGTTTTAGACAAATTTTTGAACAAATCGGCAGTTTTAATTAGTTGCAGTTTCTTAAGACGAGAAGGAATTTGTATTCTTAAACTTAAGAGTCTGATTTCTCCAAATGGTGGCATTTTATTCTTAACACTACTTGAATCTGATTTGTGTTTAAAAATGGCCAGTCAATATTCACGTCTTACGATTCTACCTCCATTTATATGTGTAATCCTTCTTTTATTTGATTGTCATGCTTCACTTATCCGTTATTTTTTAGTTGTGTAATTCTAGAAGGAATTTTATTAATTCTCTTGCTTCGAGATGATTGTACTCGGAGAAAGGTTGCTCCTCTGATAATTTATAGGCTTATAATTTACACCAGATCAAATGTGCTCATGAGATTAGATCTGTTTTGGAGAGAGGTGGTAAATCACAGCCGAACACATGTGAAAACTTGAGAGCCTTGAAACAAGCAATATCAGTTCAAAGTCAAACCAAGACGAGCTTGCTTCTATCACAAAATCATTTTCTCGTTTTCTCTTTCCTTCTTAGCTTGTTGGTGTTTATCACGCCCTGATCTTTGGATCATTCTGTGTCATTCAATTAGAGAACGCTGGTTCTGATATTTTTACATCCGCGCAGATATATCACAACAGGCTCAATCGGCTATGGAGAACATGCTTAGAATGATCAGGTTTGTTAATTACGAACCAGTAACTCGTTTCTTTCTTTCCTTTTTGTTTTTTGGATTTTTAGTTTGCGGGAAATGTTGTAAAGTGGTAAGCTGCAAGTGGGGAGAGTGAACATTACTACATGCGAACTTGATGCTTCGATGCTATCATCCTTGCACTGACAACGAAATTTTTTTAATTTTTATAAAAGAGATCTTAAAAGCACGAACTCCTCTAAATAATACATGGAGTTGAAGGAACGCAAATAGTATGATGACATGAAGTTTGCTTCGATGCTTAGATTTCTGGTTCATGCTTTCAATAAATACTATAAACAAATTTGTGCCAGCGAAAGATCGACTACTTTACATGCGGAGCCAATTTAAAGCTATGCTCATAAAACACTGGTTTTGTTTACTTTTTTCTTCTTCTTCGTAATAGAGGATTCTCCCAGTCAGAAAATATGAATATACTTTAGTGAAGTTATCTGTTCTTTGTCGCCCACCAATACTCCTAATGACTCAAATTAATTGCATAAAACATAATAATGGTACGTCTACGTCGTCATGCTAACCTTAGTCTTCTCGTTTTCAACTGTTTGCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTAA ATGGCAACTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAGTCTGAATCGCTGCCGGAATCTGAATCTGAATCGCAGCTCTCAGTTCTCATATTCGTCTTCTCGTTTTCAACTGTTTGCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTAA ATGGCAACTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAGTCTGAATCGCTGCCGGAATCTGAATCTGAATCGCAGCTCTCAGTTCTCATATTCGTCTTCTCGTTTTCAACTGTTTGCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTAA MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFSFSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL Homology
BLAST of HG10013552 vs. NCBI nr
Match: XP_022937053.1 (uncharacterized protein LOC111443468 [Cucurbita moschata]) HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34 Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of HG10013552 vs. NCBI nr
Match: XP_023535872.1 (uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.4 bits (381), Expect = 4.0e-33 Identity = 83/105 (79.05%), Postives = 89/105 (84.76%), Query Frame = 0
BLAST of HG10013552 vs. NCBI nr
Match: KAG7024488.1 (hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32 Identity = 85/107 (79.44%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of HG10013552 vs. NCBI nr
Match: XP_022976221.1 (uncharacterized protein LOC111476676 [Cucurbita maxima]) HSP 1 Score: 147.9 bits (372), Expect = 4.5e-32 Identity = 82/105 (78.10%), Postives = 88/105 (83.81%), Query Frame = 0
BLAST of HG10013552 vs. NCBI nr
Match: XP_004136463.2 (uncharacterized protein LOC101215419 [Cucumis sativus] >KAE8651370.1 hypothetical protein Csa_001898 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 3.8e-31 Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of HG10013552 vs. ExPASy TrEMBL
Match: A0A6J1FEZ1 (uncharacterized protein LOC111443468 OS=Cucurbita moschata OX=3662 GN=LOC111443468 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.3e-34 Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of HG10013552 vs. ExPASy TrEMBL
Match: A0A6J1IGC1 (uncharacterized protein LOC111476676 OS=Cucurbita maxima OX=3661 GN=LOC111476676 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32 Identity = 82/105 (78.10%), Postives = 88/105 (83.81%), Query Frame = 0
BLAST of HG10013552 vs. ExPASy TrEMBL
Match: A0A0A0LJE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881050 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31 Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of HG10013552 vs. ExPASy TrEMBL
Match: A0A5A7TBQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007070 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.9e-30 Identity = 83/106 (78.30%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of HG10013552 vs. ExPASy TrEMBL
Match: A0A1S3CR82 (uncharacterized protein LOC103503784 OS=Cucumis melo OX=3656 GN=LOC103503784 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.9e-30 Identity = 83/106 (78.30%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of HG10013552 vs. TAIR 10
Match: AT5G25570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12 Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of HG10013552 vs. TAIR 10
Match: AT5G25570.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12 Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of HG10013552 vs. TAIR 10
Match: AT5G25570.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 67.8 bits (164), Expect = 5.5e-12 Identity = 31/50 (62.00%), Postives = 42/50 (84.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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