Moc06g32460 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTCGGAGCCGCCGCATGCGACGGAACCGAGCTCTACTCCGACGCTATCTCTCTCTCAGCTTCTGCCGGAGCCGCCGTGGATGCCCACGCCGCCGCGTTTAACTCTGGCCTCAATCCCCTTCCTGTGGGAGGAGGCGCCGGGCAAGCCCCGCCAATGCGCCGGATCACAAGCTCCGCCGTCGCCACCGCTGCCGCCGGGAGAGAGAACGTTGGAGCTGCCTCCGCGGCTGCAGACCGCTCTGCCGTCGCCTACAACGGTGCTCGACGGCCCGGAAATTAGGAGGGCAGGGGGATCCAACTCCAAGAGATGGGGCAGTTTCAGGAAGTGTAAGGAAATCGCCGTCGCCGGCGGCGGCGGCGGGAGGCTTAGAAGGAAGAGAAATGTATTGCTATCAGTTTCATCTTATTCAAAATCACACTTCTTGGTAAACTGCTCCAAACATTTCCTCTCTCTTTTTTATTAGTCAAAACACATTTCAAATAGATGTTGTTTGGTCTTAAATTTTTTAATATTTTTATTCGTAATTAAAAGTACTAATTGCATGGTTAAATAAGATTTTAATAGGAGAGATTTAAGTTCAAATCGATAAATCGAATTCAGATTTAATATCAACCTAACTTAACAGTAAATGACATCTATTTTATCCTTGAGGTTGAAGTTGAAAGTTTAAATTTTTAGTACTTAAACTATAAATACCTCTTTTATTTACAATTTCACGTATCATTAACTGAAATATGATATTTTATTTTTCATAAGGTACATTTTCTATACTCATTTTTTTAGGGCATTCCACAACCATAAATACTACTAAAAATTTACCATACCTCCGTAGTACTAAAAATTTTCACCATGACGAAGCAGCTCCTTGCCTGTAAAATTTTTACCCAACTAGTCTATGTTATTTATTTTCAAAATGACAAGTGTCATTGTTTTATAATCGTTGAGTTTTAGTGAAAATTTAAATATTTTAACAAATATATTAATGATATAATTGAATGAATTGAATTGCAGGTGAGCATCTATGA ATGTGGTCGGAGCCGCCGCATGCGACGGAACCGAGCTCTACTCCGACGCTATCTCTCTCTCAGCTTCTGCCGGAGCCGCCGTGGATGCCCACGCCGCCGCGTTTAACTCTGGCCTCAATCCCCTTCCTGTGGGAGGAGGCGCCGGGCAAGCCCCGCCAATGCGCCGGATCACAAGCTCCGCCGTCGCCACCGCTGCCGCCGGGAGAGAGAACGTTGGAGCTGCCTCCGCGGCTGCAGACCGCTCTGCCGTCGCCTACAACGGTGCTCGACGGCCCGGAAATTAGGAGGGCAGGGGGATCCAACTCCAAGAGATGGGGCAGTTTCAGGAAGTGTGAGCATCTATGA ATGTGGTCGGAGCCGCCGCATGCGACGGAACCGAGCTCTACTCCGACGCTATCTCTCTCTCAGCTTCTGCCGGAGCCGCCGTGGATGCCCACGCCGCCGCGTTTAACTCTGGCCTCAATCCCCTTCCTGTGGGAGGAGGCGCCGGGCAAGCCCCGCCAATGCGCCGGATCACAAGCTCCGCCGTCGCCACCGCTGCCGCCGGGAGAGAGAACGTTGGAGCTGCCTCCGCGGCTGCAGACCGCTCTGCCGTCGCCTACAACGGTGCTCGACGGCCCGGAAATTAGGAGGGCAGGGGGATCCAACTCCAAGAGATGGGGCAGTTTCAGGAAGTGTGAGCATCTATGA MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGSNSKRWGSFRKCEHL Homology
BLAST of Moc06g32460 vs. NCBI nr
Match: XP_022158043.1 (uncharacterized protein At4g00950-like [Momordica charantia]) HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of Moc06g32460 vs. NCBI nr
Match: XP_022995989.1 (uncharacterized protein At4g00950-like [Cucurbita maxima]) HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29 Identity = 79/118 (66.95%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of Moc06g32460 vs. NCBI nr
Match: KAG6605789.1 (hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035754.1 hypothetical protein SDJN02_02552, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 9.4e-29 Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Moc06g32460 vs. NCBI nr
Match: XP_022958693.1 (uncharacterized protein LOC111459844 [Cucurbita moschata]) HSP 1 Score: 137.1 bits (344), Expect = 9.4e-29 Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Moc06g32460 vs. NCBI nr
Match: XP_038875428.1 (uncharacterized protein LOC120067888 [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 2.6e-23 Identity = 71/118 (60.17%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Moc06g32460 vs. ExPASy TrEMBL
Match: A0A6J1DV06 (uncharacterized protein At4g00950-like OS=Momordica charantia OX=3673 GN=LOC111024622 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of Moc06g32460 vs. ExPASy TrEMBL
Match: A0A6J1K7H0 (uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC111491336 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 79/118 (66.95%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of Moc06g32460 vs. ExPASy TrEMBL
Match: A0A6J1H3S6 (uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC111459844 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.5e-29 Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Moc06g32460 vs. ExPASy TrEMBL
Match: A0A5A7TKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00430 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.4e-22 Identity = 70/120 (58.33%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Moc06g32460 vs. ExPASy TrEMBL
Match: A0A1S3AU39 (uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.4e-22 Identity = 70/120 (58.33%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Moc06g32460 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 48/125 (38.40%), Postives = 57/125 (45.60%), Query Frame = 0
BLAST of Moc06g32460 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 48/125 (38.40%), Postives = 57/125 (45.60%), Query Frame = 0
BLAST of Moc06g32460 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 37/78 (47.44%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Moc06g32460 vs. TAIR 10
Match: AT5G51680.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 34/88 (38.64%), Postives = 44/88 (50.00%), Query Frame = 0
BLAST of Moc06g32460 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 41.2 bits (95), Expect = 6.5e-04 Identity = 42/113 (37.17%), Postives = 53/113 (46.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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