Moc04g36880 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCCAAAACGAAGATTCTCCCAAATCCTCTCAGAAATGTCAGAAGAAGAATCAAAAGGAGGTTTTGCCGCCGTCCCTGCGCTTTCGGAGGCCGGAATCCCGTCAAATATGGCGAAACAACGTCGTCGTCGTCGCTGCCGTGCTCCTCCTCCGACGTGGCGGCTAAATTGGAGGCTCTGGAGAGCCTCATTCCGGCGCAAACTGCCGGCGAAGCCCGCAAAACGGAGCAGTTGTTCAAGGAAACTGCGGATTACATTGTTCTATTGAAAACCCAGGTCGTGATTTTGCAGAAGCTGGTCGATTTTTTTGGATCCAGCTGCAGTGACGACGCAGAAAACGCCGTCGTTTCATAG ATGAGCTCCAAAACGAAGATTCTCCCAAATCCTCTCAGAAATGTCAGAAGAAGAATCAAAAGGAGGTTTTGCCGCCGTCCCTGCGCTTTCGGAGGCCGGAATCCCGTCAAATATGGCGAAACAACGTCGTCGTCGTCGCTGCCGTGCTCCTCCTCCGACGTGGCGGCTAAATTGGAGGCTCTGGAGAGCCTCATTCCGGCGCAAACTGCCGGCGAAGCCCGCAAAACGGAGCAGTTGTTCAAGGAAACTGCGGATTACATTGTTCTATTGAAAACCCAGGTCGTGATTTTGCAGAAGCTGGTCGATTTTTTTGGATCCAGCTGCAGTGACGACGCAGAAAACGCCGTCGTTTCATAG ATGAGCTCCAAAACGAAGATTCTCCCAAATCCTCTCAGAAATGTCAGAAGAAGAATCAAAAGGAGGTTTTGCCGCCGTCCCTGCGCTTTCGGAGGCCGGAATCCCGTCAAATATGGCGAAACAACGTCGTCGTCGTCGCTGCCGTGCTCCTCCTCCGACGTGGCGGCTAAATTGGAGGCTCTGGAGAGCCTCATTCCGGCGCAAACTGCCGGCGAAGCCCGCAAAACGGAGCAGTTGTTCAAGGAAACTGCGGATTACATTGTTCTATTGAAAACCCAGGTCGTGATTTTGCAGAAGCTGGTCGATTTTTTTGGATCCAGCTGCAGTGACGACGCAGAAAACGCCGTCGTTTCATAG MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAVVS Homology
BLAST of Moc04g36880 vs. NCBI nr
Match: XP_022993697.1 (uncharacterized protein LOC111489609 [Cucurbita maxima]) HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20 Identity = 72/114 (63.16%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of Moc04g36880 vs. NCBI nr
Match: KAA0039441.1 (transcription factor UPBEAT1-like [Cucumis melo var. makuwa] >TYK00630.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 6.3e-20 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of Moc04g36880 vs. NCBI nr
Match: KAG7016112.1 (hypothetical protein SDJN02_21216, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.5 bits (267), Expect = 8.2e-20 Identity = 70/111 (63.06%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Moc04g36880 vs. NCBI nr
Match: KAG6578552.1 (hypothetical protein SDJN03_23000, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19 Identity = 69/111 (62.16%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Moc04g36880 vs. NCBI nr
Match: XP_021605600.1 (uncharacterized protein LOC110610041 [Manihot esculenta] >OAY56902.1 hypothetical protein MANES_02G054200v8 [Manihot esculenta]) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Moc04g36880 vs. ExPASy TrEMBL
Match: A0A6J1JTK8 (uncharacterized protein LOC111489609 OS=Cucurbita maxima OX=3661 GN=LOC111489609 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 72/114 (63.16%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of Moc04g36880 vs. ExPASy TrEMBL
Match: A0A5D3BNP5 (Transcription factor UPBEAT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002510 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 3.1e-20 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of Moc04g36880 vs. ExPASy TrEMBL
Match: A0A2C9WB72 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G054200 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 8.1e-13 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Moc04g36880 vs. ExPASy TrEMBL
Match: B9SJE1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0525880 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.6e-11 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Moc04g36880 vs. ExPASy TrEMBL
Match: A0A5A7UT08 (Transcription factor UPBEAT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001870 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.8e-11 Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0
BLAST of Moc04g36880 vs. TAIR 10
Match: AT3G29370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39240.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Moc04g36880 vs. TAIR 10
Match: AT5G39240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G29370.1); Has 15 Blast hits to 15 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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