Moc10g25880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g25880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Location	chr10: 18830049 .. 18831390 (+)
RNA-Seq Expression	Moc10g25880
Synteny	Moc10g25880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCAACGGGAGAAAACCCACTGGATGACGATGAAAATAGCATGGAGGTTCAAGAGAGGTTGGATTCTATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGTTCATGGACGAGAGTTCGAGGAAGAAGATGACAATGACGATATTTCACGATTCAAAGTCTGTATGTTGACTCCAGTCCAAGAAGGAGCATCTGGTCTTGTGGATGCCCCAAATGAAGCCACGGAGTCATCCTCATCTTCTTCCAAAGGTTTGTCTCCCTCCCTTTGAGTACAAACATATCTGATCCTAATTTCGTTGTTGTTGCAAAGAGTTCAGAAAAGGTATGTTTGGCTAAAATGGTGAAGAAAACAAAGAAAGAGAAAAATTCGACCCAAAAAGCGCCAGACACCTTTTCAAGACCGCGCACCCAGGCCGTTGTAGTGAGATTGGCCGTCCAAAAAGCAATTAAGGCTCGTCCATCTAAAAAGGGCCAAGAGGCCTAGGCCAGTTGGAGAGGCAGAAAAGCAACTTGGAGAGAGGTCGATGAAGAGGAGCCCGTTACTACCGAACCAGAATGAGCAAGGGCTAAAACGGTAAGAATAGAAGTGAAAAACCCTAACTTTACAGCCTGAGGACTCTTGCTTGAGAAGGAATTTGATGAGGAACAGGAGCCCGTTCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAGACTTTGTTTGCTCCACCTACACGTGTCTCGGAAGCCTTGGTGAAAGAGTTTTATGTTGTCATTCACCCACACCAAGGAGATGTCGTGAGAGTAAGGGGTAAGTTGGTAAGATTTTCTCCTATGATTATTAATACTAACTTTGGTTTGCCAGATGTGTTGAATGCAGTAGGCAATGAGATTATTGTGCATCCGACGGACGAACAAGTGGAAAATGCGCGGAGGCGCATATGTAGGCCACGCAAGACATAGACCGTCTCGCCTCAGGGAAAGCTTTCACAACATCGCTTGATATCATTGAATAGGGTACAGTGTGGTCTTATGTGGTGAAGAATCGGTTGATCCATACTTCACATGATGCCTCCATCCAACGTAAGAGGGTGATGATGGTGTACATTTTGATGAAGTGCATTGAGTTCAACTTTGGCAAACTCATAAGGAACAAGATTCGGGGTTGCTCCGAGAAAATGGTAGGTTCACTTGTTTTTCCTGTGCTTATAACAAAATTACGTTTGAAAGCATGTGTAGAAGCCAATGTCGAAGATGTGGAGATGCCCAAAAAGTCAGCCACGTCCATGAGAAGAGTTCGGGGATATTCGATAGTTCGTGGGAGGACTTTCCCACAAATGCAGTAG

mRNA sequence

ATGAAGTCAACGGGAGAAAACCCACTGGATGACGATGAAAATAGCATGGAGGTTCAAGAGAGGTTGGATTCTATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGTTCATGGACGAGAGTTCGAGGAAGAAGATGACAATGACGATATTTCACGATTCAAAGTCTGTATGTTGACTCCAGTCCAAGAAGGAGCATCTGGTCTTGTGGATGCCCCAAATGAAGCCACGGAGTCATCCTCATCTTCTTCCAAAGGACTCTTGCTTGAGAAGGAATTTGATGAGGAACAGGAGCCCGTTCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAGACTTTGTTTGCTCCACCTACACGTGTCTCGGAAGCCTTGGTGAAAGAGTTTTATGTTGTCATTCACCCACACCAAGGAGATGTCGTGAGAGTAAGGGTAGGCAATGAGATTATTGTGCATCCGACGGACGAACAAGTGGAAAATGCGCGGAGGCGCATATTGTGGTCTTATGTGGTGAAGAATCGGTTGATCCATACTTCACATGATGCCTCCATCCAACGTAAGAGGGTGATGATGGTGTACATTTTGATGAAGTGCATTGAGTTCAACTTTGGCAAACTCATAAGGAACAAGATTCGGGGTTGCTCCGAGAAAATGGTAGGTTCACTTGTTTTTCCTGTGCTTATAACAAAATTACGTTTGAAAGCATGTGTAGAAGCCAATGTCGAAGATGTGGAGATGCCCAAAAAGTCAGCCACGTCCATGAGAAGAGTTCGGGGATATTCGATAGTTCGTGGGAGGACTTTCCCACAAATGCAGTAG

Coding sequence (CDS)

ATGAAGTCAACGGGAGAAAACCCACTGGATGACGATGAAAATAGCATGGAGGTTCAAGAGAGGTTGGATTCTATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGTTCATGGACGAGAGTTCGAGGAAGAAGATGACAATGACGATATTTCACGATTCAAAGTCTGTATGTTGACTCCAGTCCAAGAAGGAGCATCTGGTCTTGTGGATGCCCCAAATGAAGCCACGGAGTCATCCTCATCTTCTTCCAAAGGACTCTTGCTTGAGAAGGAATTTGATGAGGAACAGGAGCCCGTTCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAGACTTTGTTTGCTCCACCTACACGTGTCTCGGAAGCCTTGGTGAAAGAGTTTTATGTTGTCATTCACCCACACCAAGGAGATGTCGTGAGAGTAAGGGTAGGCAATGAGATTATTGTGCATCCGACGGACGAACAAGTGGAAAATGCGCGGAGGCGCATATTGTGGTCTTATGTGGTGAAGAATCGGTTGATCCATACTTCACATGATGCCTCCATCCAACGTAAGAGGGTGATGATGGTGTACATTTTGATGAAGTGCATTGAGTTCAACTTTGGCAAACTCATAAGGAACAAGATTCGGGGTTGCTCCGAGAAAATGGTAGGTTCACTTGTTTTTCCTGTGCTTATAACAAAATTACGTTTGAAAGCATGTGTAGAAGCCAATGTCGAAGATGTGGAGATGCCCAAAAAGTCAGCCACGTCCATGAGAAGAGTTCGGGGATATTCGATAGTTCGTGGGAGGACTTTCCCACAAATGCAGTAG

Protein sequence

MKSTGENPLDDDENSMEVQERLDSIREDEILEDLPQEVHGREFEEEDDNDDISRFKVCMLTPVQEGASGLVDAPNEATESSSSSSKGLLLEKEFDEEQEPVPDYVKRQLVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDVVRVRVGNEIIVHPTDEQVENARRRILWSYVVKNRLIHTSHDASIQRKRVMMVYILMKCIEFNFGKLIRNKIRGCSEKMVGSLVFPVLITKLRLKACVEANVEDVEMPKKSATSMRRVRGYSIVRGRTFPQMQ

Homology

[Close]

BLAST of Moc10g25880 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-58
Identity = 158/371 (42.59%), Postives = 196/371 (52.83%), Query Frame = 0


Query: 19   QERLDSIREDEILEDLPQEVHGREFEEEDDNDDISRFKVCMLTPV--------------Q 78
            +E+L+  REDE   +LPQEVHG EFE+E+DNDDIS+++V + TPV              Q
Sbjct: 968  REQLNVDREDEDFGELPQEVHGDEFEDEEDNDDISQYEVKVRTPVHESQQVDEEPPTKEQ 1027

Query: 79   EGASGLVDAPNEATESSSSSS--------------------------------------- 138
            EG SG VD P+EA E SSSSS                                       
Sbjct: 1028 EGTSGPVDVPSEAMEESSSSSSQGAVSRPRTRTAVARLAAQKEAEAGPSKKAKTARVQRV 1087

Query: 139  -------------------------------------KGLLLEKEFDEEQEPVPDYVKRQ 198
                                                 + +LLE+ FDE QEPVP+YV+++
Sbjct: 1088 AEEPLEEANEEEPDSTEQTPSRVKRVRLEVRRPTFTTRDILLERGFDEAQEPVPEYVRKR 1147

Query: 199  LVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDVVRVRVGNEIIVHPTDEQVENARRRI 258
            +VE GWETLFAP TRVSEALVKEFY  I+P++GD VRVR GNEI+VHP+DEQVE ARR I
Sbjct: 1148 IVENGWETLFAPITRVSEALVKEFYTAINPNRGDEVRVR-GNEILVHPSDEQVEEARRLI 1207

Query: 259  ---------------------------LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKC 273
                                       +W YVVKNRLI TS+D+SI+R R M+VYIL+K 
Sbjct: 1208 CRPHKTWTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKG 1267

[Close]

BLAST of Moc10g25880 vs. NCBI nr
Match: XP_022159289.1 (uncharacterized protein LOC111025702 [Momordica charantia])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-28
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 169 LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKCIEFNFGKLIRNKIRGCSEKMVGSLVFP 228
           +WSYVVKN LI TS+D+SIQ+ RVM+VYILMK IEFNF +LIRN+I  C+EKMVG L+FP
Sbjct: 1   MWSYVVKNLLISTSYDSSIQQIRVMIVYILMKGIEFNFSELIRNEIWVCAEKMVGPLIFP 60

Query: 229 VLITKLRLKACVEANVEDVEMPKKSATSMRRVRGYSIVRGRTFP 273
             I +L LKA VEA+VEDV M KKSATS+RRVRGY IVR    P
Sbjct: 61  ARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLIVREEDSP 104

[Close]

BLAST of Moc10g25880 vs. NCBI nr
Match: XP_022158483.1 (uncharacterized protein LOC111024964 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 6.0e-21
Identity = 86/200 (43.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 2   KSTGENPLDDDENSMEVQERLDSIREDEILEDLPQEVHGREFEEEDDNDDISRFKVCM-- 61
           ++TGE+PL+DD NS E Q RL+   EDE L DLPQEVHG E EEE++NDDIS+++V +  
Sbjct: 193 EATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDISQYEVRIHI 252

Query: 62  ------------LTPVQEGASGLVDAPNEATESSSSSSKGLLLEKEFDEEQEPVPDYVKR 121
                          V EGAS  VD PNEAT  SSSSS     ++E +EE+   P   ++
Sbjct: 253 LVHESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSSKDNSKEEVNEEE---PTSTEQ 312

Query: 122 QLVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDVVRVRVGNEIIVHPTDEQVENARRR 181
           Q          +   RV EALVKEFY  IHP+QGD VRVR      +   DE V   ++ 
Sbjct: 313 QA---------SKAKRVLEALVKEFYAAIHPNQGDAVRVRG-----MKANDEDVVTPKKS 372

Query: 182 ILWSYVVKNRLIHTSHDASI 188
                 V+  LI    D+SI
Sbjct: 373 ATSMRRVRGYLIVREEDSSI 375

[Close]

BLAST of Moc10g25880 vs. NCBI nr
Match: XP_022156786.1 (uncharacterized protein LOC111023620 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-13
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 84  SSKGLLLEKEFDEEQEPVPDYVKRQLVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDV 143
           +++ +L+EK FDE QEPVP Y+KR+L+E GWETLFAP  RVSE LVKEFY  I+P++GD 
Sbjct: 159 TAREILVEKGFDEAQEPVPKYIKRRLLENGWETLFAPTMRVSETLVKEFYATINPNRGDA 218

Query: 144 VRVRV 149
           +  RV
Sbjct: 219 LVFRV 223

[Close]

BLAST of Moc10g25880 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum])

HSP 1 Score: 62.0 bits (149), Expect = 9.3e-06
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 169 LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKCIEFNFGKLIRNKIRGCSEKMVGSLVFP 228
           +W Y V+   +  SH  +I  +R++++Y ++     N GK+I  +I  C++K  GS+ FP
Sbjct: 170 VWFYFVQYSFMPISHSYTISMERMLLLYAILTEKSINVGKIILKEIHNCAKKKAGSVYFP 229

Query: 229 VLITKLRLKACV--EANVE 246
            LIT L LKACV  +ANV+
Sbjct: 230 SLITSLCLKACVKTQANVK 248

[Close]

BLAST of Moc10g25880 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 158/371 (42.59%), Postives = 196/371 (52.83%), Query Frame = 0


Query: 19   QERLDSIREDEILEDLPQEVHGREFEEEDDNDDISRFKVCMLTPV--------------Q 78
            +E+L+  REDE   +LPQEVHG EFE+E+DNDDIS+++V + TPV              Q
Sbjct: 968  REQLNVDREDEDFGELPQEVHGDEFEDEEDNDDISQYEVKVRTPVHESQQVDEEPPTKEQ 1027

Query: 79   EGASGLVDAPNEATESSSSSS--------------------------------------- 138
            EG SG VD P+EA E SSSSS                                       
Sbjct: 1028 EGTSGPVDVPSEAMEESSSSSSQGAVSRPRTRTAVARLAAQKEAEAGPSKKAKTARVQRV 1087

Query: 139  -------------------------------------KGLLLEKEFDEEQEPVPDYVKRQ 198
                                                 + +LLE+ FDE QEPVP+YV+++
Sbjct: 1088 AEEPLEEANEEEPDSTEQTPSRVKRVRLEVRRPTFTTRDILLERGFDEAQEPVPEYVRKR 1147

Query: 199  LVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDVVRVRVGNEIIVHPTDEQVENARRRI 258
            +VE GWETLFAP TRVSEALVKEFY  I+P++GD VRVR GNEI+VHP+DEQVE ARR I
Sbjct: 1148 IVENGWETLFAPITRVSEALVKEFYTAINPNRGDEVRVR-GNEILVHPSDEQVEEARRLI 1207

Query: 259  ---------------------------LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKC 273
                                       +W YVVKNRLI TS+D+SI+R R M+VYIL+K 
Sbjct: 1208 CRPHKTWTISTMGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKG 1267

[Close]

BLAST of Moc10g25880 vs. ExPASy TrEMBL
Match: A0A6J1E204 (uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025702 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.2e-28
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 169 LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKCIEFNFGKLIRNKIRGCSEKMVGSLVFP 228
           +WSYVVKN LI TS+D+SIQ+ RVM+VYILMK IEFNF +LIRN+I  C+EKMVG L+FP
Sbjct: 1   MWSYVVKNLLISTSYDSSIQQIRVMIVYILMKGIEFNFSELIRNEIWVCAEKMVGPLIFP 60

Query: 229 VLITKLRLKACVEANVEDVEMPKKSATSMRRVRGYSIVRGRTFP 273
             I +L LKA VEA+VEDV M KKSATS+RRVRGY IVR    P
Sbjct: 61  ARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLIVREEDSP 104

[Close]

BLAST of Moc10g25880 vs. ExPASy TrEMBL
Match: A0A6J1DW79 (uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024964 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-21
Identity = 86/200 (43.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 2   KSTGENPLDDDENSMEVQERLDSIREDEILEDLPQEVHGREFEEEDDNDDISRFKVCM-- 61
           ++TGE+PL+DD NS E Q RL+   EDE L DLPQEVHG E EEE++NDDIS+++V +  
Sbjct: 193 EATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDISQYEVRIHI 252

Query: 62  ------------LTPVQEGASGLVDAPNEATESSSSSSKGLLLEKEFDEEQEPVPDYVKR 121
                          V EGAS  VD PNEAT  SSSSS     ++E +EE+   P   ++
Sbjct: 253 LVHESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSSKDNSKEEVNEEE---PTSTEQ 312

Query: 122 QLVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDVVRVRVGNEIIVHPTDEQVENARRR 181
           Q          +   RV EALVKEFY  IHP+QGD VRVR      +   DE V   ++ 
Sbjct: 313 QA---------SKAKRVLEALVKEFYAAIHPNQGDAVRVRG-----MKANDEDVVTPKKS 372

Query: 182 ILWSYVVKNRLIHTSHDASI 188
                 V+  LI    D+SI
Sbjct: 373 ATSMRRVRGYLIVREEDSSI 375

[Close]

BLAST of Moc10g25880 vs. ExPASy TrEMBL
Match: A0A6J1DW11 (uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023620 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-13
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 84  SSKGLLLEKEFDEEQEPVPDYVKRQLVEQGWETLFAPPTRVSEALVKEFYVVIHPHQGDV 143
           +++ +L+EK FDE QEPVP Y+KR+L+E GWETLFAP  RVSE LVKEFY  I+P++GD 
Sbjct: 159 TAREILVEKGFDEAQEPVPKYIKRRLLENGWETLFAPTMRVSETLVKEFYATINPNRGDA 218

Query: 144 VRVRV 149
           +  RV
Sbjct: 219 LVFRV 223

[Close]

BLAST of Moc10g25880 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-06
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 169 LWSYVVKNRLIHTSHDASIQRKRVMMVYILMKCIEFNFGKLIRNKIRGCSEKMVGSLVFP 228
           +W Y V+   +  SH  +I  +R++++Y ++     N GK+I  +I  C++K  GS+ FP
Sbjct: 170 VWFYFVQYSFMPISHSYTISMERMLLLYAILTEKSINVGKIILKEIHNCAKKKAGSVYFP 229

Query: 229 VLITKLRLKACV--EANVE 246
            LIT L LKACV  +ANV+
Sbjct: 230 SLITSLCLKACVKTQANVK 248

The following BLAST results are available for this feature:

BLAST of Moc10g25880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154847.1	2.1e-58	42.59	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]	[more]
XP_022159289.1	8.6e-28	69.23	uncharacterized protein LOC111025702 [Momordica charantia]	[more]
XP_022158483.1	6.0e-21	43.00	uncharacterized protein LOC111024964 [Momordica charantia]	[more]
XP_022156786.1	7.8e-13	61.54	uncharacterized protein LOC111023620 [Momordica charantia]	[more]
TYH88163.1	9.3e-06	39.24	hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]	[more]

BLAST of Moc10g25880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g25880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMT3	1.0e-58	42.59	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia...	[more]
A0A6J1E204	4.2e-28	69.23	uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DW79	2.9e-21	43.00	uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DW11	3.8e-13	61.54	uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5D2MA47	4.5e-06	39.24	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 P...	[more]

BLAST of Moc10g25880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g25880.1	Moc10g25880.1	mRNA