Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAAGTAAAAACATTATCATTGGTGGCTTATATGGCGTAAGAAATTTTTTCCTTCTTTTCTTTATCATATTAAATTATAATAGACTTTTTTTTAAAAGAAAATTAACTATCATCTTAATCTTTGTAGGTATTGTACTCATATTGCGTTGATTCAGGGCGAGCTCAAAAGTATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGGTGAGTAAAAGTTTATTCATTACAAACATAGTTTATCACTTAATTACTTTTAGTTTGATAATCTAGCACTTGTGGATTTTTGTTTAGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACGTAAGTTCTGTTTTCACTTTGAATATGTTGTCTATTCATTTTGGTTGTTTTATTTTTTTCTTTTTTAATATGCTAAGTATTTATGTAGGGCACTTGCAATATTTCAAGCTTAGAAAAAAATAAAAGTGGATAGAAATAAAACATTATGGAAAAATGTTAAGGCAAGTATAATAATTTTTTCTTTTTCTTATTTTCATTTTTTTTCTTTTTAATTTGTTTGTGAAAATAAAAGTGTTCTCTTTGTTTTTGTAGTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA
mRNA sequence
ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAATATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA
Coding sequence (CDS)
ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAATATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA
Protein sequence
MLDLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMKEYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNPGGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVTCTVHYNQVQWNVGIM
Homology
BLAST of Sed0002737 vs. NCBI nr
Match:
KAA0046260.1 (hypothetical protein E6C27_scaffold284G00640 [Cucumis melo var. makuwa])
HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE+IM +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 548 NLPIQLKYILRYAETIMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 607
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 608 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 667
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 668 GDHWSLVIINPYDDLVYHLDSLRTSSRDDIKYVT 701
BLAST of Sed0002737 vs. NCBI nr
Match:
KAA0032194.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 655 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 714
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+YIF+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 715 AYITYLYSLIIDLKKVSKYIFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 774
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 775 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 808
BLAST of Sed0002737 vs. NCBI nr
Match:
TYK01269.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 210 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 269
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 270 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 329
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 330 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 363
BLAST of Sed0002737 vs. NCBI nr
Match:
TYK22869.1 (hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 1324 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1383
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 1384 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1443
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1444 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1477
BLAST of Sed0002737 vs. NCBI nr
Match:
TYK18940.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 1327 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1386
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 1387 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1446
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1447 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1480
BLAST of Sed0002737 vs. ExPASy TrEMBL
Match:
A0A5A7TSY7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00640 PE=3 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 5.2e-38
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE+IM +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 548 NLPIQLKYILRYAETIMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 607
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 608 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 667
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 668 GDHWSLVIINPYDDLVYHLDSLRTSSRDDIKYVT 701
BLAST of Sed0002737 vs. ExPASy TrEMBL
Match:
A0A5A7SLX6 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 PE=3 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 6.9e-38
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 655 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 714
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+YIF+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 715 AYITYLYSLIIDLKKVSKYIFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 774
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 775 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 808
BLAST of Sed0002737 vs. ExPASy TrEMBL
Match:
A0A5D3DFW8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00510 PE=3 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 857 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 916
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 917 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 976
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 977 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1010
BLAST of Sed0002737 vs. ExPASy TrEMBL
Match:
A0A5D3D5Z2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00230 PE=3 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 1327 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1386
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 1387 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1446
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1447 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1480
BLAST of Sed0002737 vs. ExPASy TrEMBL
Match:
A0A5D3DHZ4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00040 PE=3 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0
Query: 3 DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
+LP L I R+AE +M +S S QLP LFG SRKS VL +D+IDFCNM+
Sbjct: 1324 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1383
Query: 63 -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
+Y+F+DPSLIS G T +IR NLCSRL T+++DQLVVAPYNP
Sbjct: 1384 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1443
Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1444 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1477
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0046260.1 | 1.1e-37 | 55.19 | hypothetical protein E6C27_scaffold284G00640 [Cucumis melo var. makuwa] | [more] |
| KAA0032194.1 | 1.4e-37 | 55.19 | transposase [Cucumis melo var. makuwa] | [more] |
| TYK01269.1 | 1.8e-37 | 54.55 | transposase [Cucumis melo var. makuwa] | [more] |
| TYK22869.1 | 1.8e-37 | 54.55 | hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa] | [more] |
| TYK18940.1 | 1.8e-37 | 54.55 | transposase [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TSY7 | 5.2e-38 | 55.19 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7SLX6 | 6.9e-38 | 55.19 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 P... | [more] |
| A0A5D3DFW8 | 9.0e-38 | 54.55 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00510 PE... | [more] |
| A0A5D3D5Z2 | 9.0e-38 | 54.55 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00230 PE... | [more] |
| A0A5D3DHZ4 | 9.0e-38 | 54.55 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
