Moc03g29110 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g29110
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description50S ribosomal protein L7/L12
Locationchr3: 20839262 .. 20839903 (-)
RNA-Seq ExpressionMoc03g29110
SyntenyMoc03g29110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTTGGTTTTAAGAATAAGGCACCTCCTACCCAATGTATTTGCAAACACCATTCGCTCTCCTGCGGTTGCCCTGAATCCTCTCAACTCAAATGGATTACATAGAAATTATGCTCAACCTGCTCGAATAGAGGAGGAAGAGGACGAGGTAGAGATTGACCAGAGAAGGCTTCCAGCTGATTACGATCCAGCAAATTTTGATCCAACAGAGCATCGTAGTCCTCCAACGGATCGTGTTTTTAGGCTTGTGGATGAAATATCTGGACTCACACTAGTTGAAGTAGCTGAATTGTCCACCATTTTGAGGAAAAAATTAGGAATGACGGATATGCCAGTTGTTGGAGTTATGAAACCAGGAGCTGCAGGATTGGGTGGAATGGCGATGAAGGCATCAACAGCTGCCAAGGAGGAGAAGAAGCCAGAAAAGACTGTTTATGAGTTGAAACTAGAGTCTTATGAAGCGTCTGCAAAGATTAAAATTATCAAGGAGGTGAGAAGTTTTACTGATTTAGGTCTAAAGGAAGCAAAGGATCTAGTGGAGAAAACGCCATCAGTGTTGAAGAAGGGACTATCAAAGGAAGAGGGCGAACAATTAATTGAAAAGATGAAGGCACTTGGTGCAAAAGTCATCTTGGAATAG

mRNA sequence

ATGCACTTGGTTTTAAGAATAAGGCACCTCCTACCCAATGTATTTGCAAACACCATTCGCTCTCCTGCGGTTGCCCTGAATCCTCTCAACTCAAATGGATTACATAGAAATTATGCTCAACCTGCTCGAATAGAGGAGGAAGAGGACGAGGTAGAGATTGACCAGAGAAGGCTTCCAGCTGATTACGATCCAGCAAATTTTGATCCAACAGAGCATCGTAGTCCTCCAACGGATCGTGTTTTTAGGCTTGTGGATGAAATATCTGGACTCACACTAGTTGAAGTAGCTGAATTGTCCACCATTTTGAGGAAAAAATTAGGAATGACGGATATGCCAGTTGTTGGAGTTATGAAACCAGGAGCTGCAGGATTGGGTGGAATGGCGATGAAGGCATCAACAGCTGCCAAGGAGGAGAAGAAGCCAGAAAAGACTGTTTATGAGTTGAAACTAGAGTCTTATGAAGCGTCTGCAAAGATTAAAATTATCAAGGAGGTGAGAAGTTTTACTGATTTAGGTCTAAAGGAAGCAAAGGATCTAGTGGAGAAAACGCCATCAGTGTTGAAGAAGGGACTATCAAAGGAAGAGGGCGAACAATTAATTGAAAAGATGAAGGCACTTGGTGCAAAAGTCATCTTGGAATAG

Coding sequence (CDS)

ATGCACTTGGTTTTAAGAATAAGGCACCTCCTACCCAATGTATTTGCAAACACCATTCGCTCTCCTGCGGTTGCCCTGAATCCTCTCAACTCAAATGGATTACATAGAAATTATGCTCAACCTGCTCGAATAGAGGAGGAAGAGGACGAGGTAGAGATTGACCAGAGAAGGCTTCCAGCTGATTACGATCCAGCAAATTTTGATCCAACAGAGCATCGTAGTCCTCCAACGGATCGTGTTTTTAGGCTTGTGGATGAAATATCTGGACTCACACTAGTTGAAGTAGCTGAATTGTCCACCATTTTGAGGAAAAAATTAGGAATGACGGATATGCCAGTTGTTGGAGTTATGAAACCAGGAGCTGCAGGATTGGGTGGAATGGCGATGAAGGCATCAACAGCTGCCAAGGAGGAGAAGAAGCCAGAAAAGACTGTTTATGAGTTGAAACTAGAGTCTTATGAAGCGTCTGCAAAGATTAAAATTATCAAGGAGGTGAGAAGTTTTACTGATTTAGGTCTAAAGGAAGCAAAGGATCTAGTGGAGAAAACGCCATCAGTGTTGAAGAAGGGACTATCAAAGGAAGAGGGCGAACAATTAATTGAAAAGATGAAGGCACTTGGTGCAAAAGTCATCTTGGAATAG

Protein sequence

MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Homology
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BLAST of Moc03g29110 vs. NCBI nr
Match: XP_022137691.1 (uncharacterized protein LOC111009067 [Momordica charantia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA
Sbjct: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV 180
           AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV
Sbjct: 121 AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV 180

Query: 181 EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 213

[Close]
BLAST of Moc03g29110 vs. NCBI nr
Match: XP_038876937.1 (50S ribosomal protein L7/L12 [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 5.0e-100
Identity = 201/215 (93.49%), Postives = 210/215 (97.67%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLRIRHLLPNVFANTIRSPAVALNPLN NGLHRNYAQPARIE+EE+E+EIDQRRLPA
Sbjct: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNINGLHRNYAQPARIEDEEEELEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKASTA--AKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKD 180
           AAGL GMAMKAS++  AKEEKK EKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKD
Sbjct: 121 AAGLAGMAMKASSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKD 180

Query: 181 LVEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           LVEKTPSVLKKGLSKEEGE++IEKMKALGAKVILE
Sbjct: 181 LVEKTPSVLKKGLSKEEGEKIIEKMKALGAKVILE 215

[Close]
BLAST of Moc03g29110 vs. NCBI nr
Match: XP_022954769.1 (uncharacterized protein LOC111456924 [Cucurbita moschata] >XP_022954770.1 uncharacterized protein LOC111456924 [Cucurbita moschata])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 194/214 (90.65%), Postives = 199/214 (92.99%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLR RHLLP VF N +RSP  A    N NGLHRNYAQPARIEEEE+EVEIDQRRLPA
Sbjct: 1   MHLVLRTRHLLPGVFTNIVRSPVAA---FNLNGLHRNYAQPARIEEEEEEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKAS-TAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GM MKAS  AAKEEKKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMGMKASAAAAKEEKKPEKTVYELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 211

[Close]
BLAST of Moc03g29110 vs. NCBI nr
Match: KAG6584188.1 (50S ribosomal protein L7/L12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019780.1 50S ribosomal protein L7/L12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.4 bits (908), Expect = 7.0e-94
Identity = 195/214 (91.12%), Postives = 203/214 (94.86%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           M LVLRI HLLPNV ANT RSPA+ALNPLN NGLHRN++QPARIEEEE EVEIDQRRLPA
Sbjct: 1   MRLVLRISHLLPNVLANTFRSPALALNPLNVNGLHRNFSQPARIEEEE-EVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMK G
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKAG 120

Query: 121 AAGLGGMAMKASTA-AKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GMA KAS+A AKEEKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMATKASSATAKEEKKTEKTVFELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 213

[Close]
BLAST of Moc03g29110 vs. NCBI nr
Match: XP_023542773.1 (uncharacterized protein LOC111802581 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 7.0e-94
Identity = 194/214 (90.65%), Postives = 199/214 (92.99%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLR RHLLP VF N +RSP VA    N NGL RNYAQPARIEEEE+EVEIDQRRLPA
Sbjct: 1   MHLVLRTRHLLPGVFTNIVRSPVVA---FNLNGLRRNYAQPARIEEEEEEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKASTAA-KEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GM MKAS AA KEEKKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMGMKASAAASKEEKKPEKTVYELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 211

[Close]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match: Q9USJ9 (54S ribosomal protein L12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl12 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-18
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 0 

Query: 79  RVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAKEE 138
           ++  +VD+IS L+L+E +EL   L++KL + ++  +  + P  A     A  +   A EE
Sbjct: 43  QIGEMVDKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVAS----AAPSEEKAPEE 102

Query: 139 KKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQ 198
           KK EKT + LKLES++A +K K+IKEV+S   L L +AK  VE  P VLK+ + KE+ E 
Sbjct: 103 KKEEKTTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEA 162

Query: 199 LIEKMKALGAKVILE 214
           +  K++ L  KV+LE
Sbjct: 163 IKSKLEKLSCKVVLE 173

[Close]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match: P41189 (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.5e-17
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 0 

Query: 83  LVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAKEEKKPE 142
           +V+++S LTL++ AELS  L ++ G++    V V+   AAG    A+            E
Sbjct: 7   IVEKLSSLTLLQAAELSKRLEEEWGVSAAAPVAVV-ASAAGESAAAV-----------AE 66

Query: 143 KTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQLIEK 202
           KT +E+ LE ++A  KI +IKEVR+ T+LGLKEAKD VE  P  LK G+SK+E E+L +K
Sbjct: 67  KTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKK 124

Query: 203 MKALGAKVIL 213
           ++A GA +IL
Sbjct: 127 LEAAGATIIL 124

[Close]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match: P53163 (54S ribosomal protein L12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNP1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.6e-16
Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 0 

Query: 75  PPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTD--MPVVGVMKPGAAGLGGMAMKAS 134
           P   ++ ++V +IS LTL+E + L   L+  L + +  MP+ G M  GAAG G   + +S
Sbjct: 49  PVDPKISKIVQDISQLTLLETSSLINELKTVLNIPEISMPMGGFM-AGAAGAGAGNVPSS 108

Query: 135 T-----AAKEEKKPE-KTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSV 194
           T      A+EE KPE KTV+ +KL+S++   K K+IKEV+    L L EAK  VE  P V
Sbjct: 109 TGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKFVEAAPKV 168

Query: 195 LKKGLSKEEGEQLIEKMKALGAKVILE 214
           LK+ ++K++ E++ + ++ LGAKV LE
Sbjct: 169 LKENVAKDDAEKIKKTLEDLGAKVSLE 194

[Close]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match: A5ELN8 (50S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) OX=288000 GN=rplL PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.9e-16
Identity = 55/132 (41.67%), Postives = 84/132 (63.64%), Query Frame = 0 

Query: 82  RLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAKEEKKP 141
           ++VD++S LT++E AEL+ +L +K G++    V V  PGA G        + AA  E+K 
Sbjct: 6   KIVDDLSALTVLEAAELAKLLEEKWGVSAAAAVAVAAPGAGG--------AAAAPAEEKT 65

Query: 142 EKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQLIE 201
           E TV    + +     KI++IKEVR+ T LGLKEAKDLVE  P  +K+G++K+E E++  
Sbjct: 66  EFTV----VLASAGDKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEAEKIKG 125

Query: 202 KMKALGAKVILE 214
           +++  GAKV L+
Sbjct: 126 QLEKAGAKVELK 125

[Close]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match: A4YSI0 (50S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=rplL PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 0 

Query: 82  RLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAKEEKKP 141
           ++VD++S LT++E AEL+ +L +K G++    V V  PG  G        + AA  E+K 
Sbjct: 6   KIVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAPGGGG--------AAAAPAEEKT 65

Query: 142 EKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEGEQLIE 201
           E TV    + +     KI++IKEVR+ T LGLKEAKDLVE  P  +K+G++KEE E++  
Sbjct: 66  EFTV----VLASAGDKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKEEAEKIKG 125

Query: 202 KMKALGAKVILE 214
           +++  GAKV L+
Sbjct: 126 QLEKAGAKVELK 125

[Close]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match: A0A6J1C7E3 (uncharacterized protein LOC111009067 OS=Momordica charantia OX=3673 GN=LOC111009067 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA
Sbjct: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV 180
           AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV
Sbjct: 121 AAGLGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLV 180

Query: 181 EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 EKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 213

[Close]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match: A0A6J1GU05 (uncharacterized protein LOC111456924 OS=Cucurbita moschata OX=3662 GN=LOC111456924 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 194/214 (90.65%), Postives = 199/214 (92.99%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLR RHLLP VF N +RSP  A    N NGLHRNYAQPARIEEEE+EVEIDQRRLPA
Sbjct: 1   MHLVLRTRHLLPGVFTNIVRSPVAA---FNLNGLHRNYAQPARIEEEEEEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKAS-TAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GM MKAS  AAKEEKKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMGMKASAAAAKEEKKPEKTVYELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 211

[Close]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match: A0A6J1JZ85 (uncharacterized protein LOC111490181 OS=Cucurbita maxima OX=3661 GN=LOC111490181 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           MHLVLR RHLLP VF N +RSP  A    N NGLHRNYAQPA IEEEE+EVEIDQRRLPA
Sbjct: 1   MHLVLRTRHLLPGVFTNIVRSPVAA---FNLNGLHRNYAQPAWIEEEEEEVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLGMTDMPVVGVMKPG
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGMTDMPVVGVMKPG 120

Query: 121 AAGLGGMAMKAS-TAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GM MKAS  AAKE KKPEKTVYELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMGMKASAAAAKEVKKPEKTVYELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 211

[Close]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match: A0A6J1KHE7 (uncharacterized protein LOC111495277 OS=Cucurbita maxima OX=3661 GN=LOC111495277 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.9e-92
Identity = 193/214 (90.19%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           M LVLRI HLLPNV ANT RSPA+ALNPLN NGLHRN+AQPARIEEE  EVEIDQRRLPA
Sbjct: 1   MRLVLRISHLLPNVLANTFRSPALALNPLNVNGLHRNFAQPARIEEE--EVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYD ANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRKKLG+TDMPVVGVMK G
Sbjct: 61  DYDLANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKKLGLTDMPVVGVMKAG 120

Query: 121 AAGLGGMAMKASTA-AKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GMA KAS+A AKEEKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMATKASSATAKEEKKTEKTVFELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 212

[Close]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match: A0A6J1E822 (uncharacterized protein LOC111431646 OS=Cucurbita moschata OX=3662 GN=LOC111431646 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92
Identity = 192/214 (89.72%), Postives = 202/214 (94.39%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           M LVLRI HLLPNV ANT RSPA+ALNPLN NGLHR+++QPA IEEEE EVEIDQRRLPA
Sbjct: 1   MRLVLRISHLLPNVLANTFRSPALALNPLNVNGLHRDFSQPAWIEEEE-EVEIDQRRLPA 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPANFDPT+HRSPPTDRVFRLVDEISGLTLVEVAELS+ILRK+LGMTDMPVVGVMK G
Sbjct: 61  DYDPANFDPTQHRSPPTDRVFRLVDEISGLTLVEVAELSSILRKRLGMTDMPVVGVMKAG 120

Query: 121 AAGLGGMAMKASTA-AKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDL 180
           AAGL GMA KAS+A AKEEKK EKTV+ELKLESYEA+AKIKIIKEVRSFTDLGLKEAKDL
Sbjct: 121 AAGLAGMATKASSATAKEEKKTEKTVFELKLESYEAAAKIKIIKEVRSFTDLGLKEAKDL 180

Query: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE
Sbjct: 181 VEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 213

[Close]
BLAST of Moc03g29110 vs. TAIR 10
Match: AT1G70190.1 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like )

HSP 1 Score: 244.6 bits (623), Expect = 7.3e-65
Identity = 139/217 (64.06%), Postives = 168/217 (77.42%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           M LVLR R  L    +         L+ L+  G +R+Y QPA+IE+EE+E E DQR+LP 
Sbjct: 1   MSLVLRFRQHLSQTSSR--------LSLLSRIGGYRSYTQPAKIEDEEEE-EFDQRKLPT 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPA FDPTEHRSPPTDRVFRLVDEIS LTL+E++EL +I+ KK GMT++P V VMKPG
Sbjct: 61  DYDPATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPG 120

Query: 121 AAG----LGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEA 180
           A G     GG  M + +   EE K EKTV+E+KLES+EASAKIKIIKE+RSFTDLGLKEA
Sbjct: 121 AGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEA 180

Query: 181 KDLVEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           K LVEKTP++LK GLSKEEGE+++EK+KALGAKV+LE
Sbjct: 181 KALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 208

[Close]
BLAST of Moc03g29110 vs. TAIR 10
Match: AT1G70190.2 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like )

HSP 1 Score: 244.6 bits (623), Expect = 7.3e-65
Identity = 139/217 (64.06%), Postives = 168/217 (77.42%), Query Frame = 0 

Query: 1   MHLVLRIRHLLPNVFANTIRSPAVALNPLNSNGLHRNYAQPARIEEEEDEVEIDQRRLPA 60
           M LVLR R  L    +         L+ L+  G +R+Y QPA+IE+EE+E E DQR+LP 
Sbjct: 1   MSLVLRFRQHLSQTSSR--------LSLLSRIGGYRSYTQPAKIEDEEEE-EFDQRKLPT 60

Query: 61  DYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPG 120
           DYDPA FDPTEHRSPPTDRVFRLVDEIS LTL+E++EL +I+ KK GMT++P V VMKPG
Sbjct: 61  DYDPATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPG 120

Query: 121 AAG----LGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEA 180
           A G     GG  M + +   EE K EKTV+E+KLES+EASAKIKIIKE+RSFTDLGLKEA
Sbjct: 121 AGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEA 180

Query: 181 KDLVEKTPSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           K LVEKTP++LK GLSKEEGE+++EK+KALGAKV+LE
Sbjct: 181 KALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 208

[Close]
BLAST of Moc03g29110 vs. TAIR 10
Match: AT4G36420.1 (Ribosomal protein L12 family protein )

HSP 1 Score: 134.8 bits (338), Expect = 8.1e-32
Identity = 75/145 (51.72%), Postives = 110/145 (75.86%), Query Frame = 0 

Query: 72  HRSPPT--DRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLG-GMA 131
           + SP T  + V ++V+E+S LTL+E  +L+ ILR+KL ++++PV+  M PG +  G G +
Sbjct: 35  YSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSLPGSGAS 94

Query: 132 MKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLK 191
             A    KE+KK  KT +++ L++Y+A +KIK+IKEVR+ T LGLKEAKDLVEK P++LK
Sbjct: 95  KSAGGEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAPTLLK 154

Query: 192 KGLSKEEGEQLIEKMKALGAKVILE 214
           KG+SKEE E++IEK+KA+GAKV +E
Sbjct: 155 KGVSKEEAEKIIEKLKAVGAKVAME 179

[Close]
BLAST of Moc03g29110 vs. TAIR 10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 59/137 (43.07%), Postives = 94/137 (68.61%), Query Frame = 0 

Query: 77  TDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAGLGGMAMKASTAAK 136
           T ++ R+ D++  L  +E+ + S +   K+G+         + G+A     ++  ++A+ 
Sbjct: 39  TKKLERIADDLLKLNRIELYDYSLLFSHKIGLN--------RYGSAVAVTGSVGDASAST 98

Query: 137 EEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKTPSVLKKGLSKEEG 196
           E K  EKT +++KLE +EA++KIK+IKE+R+FTDLGLKEAK LVEK P ++K GL+KEE 
Sbjct: 99  ETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAPVIVKNGLTKEEA 158

Query: 197 EQLIEKMKALGAKVILE 214
           E+++EK+KA+GA V LE
Sbjct: 159 EKIMEKLKAVGAIVALE 167

[Close]
BLAST of Moc03g29110 vs. TAIR 10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.4e-22
Identity = 59/150 (39.33%), Postives = 96/150 (64.00%), Query Frame = 0 

Query: 64  PANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAELSTILRKKLGMTDMPVVGVMKPGAAG 123
           P+ +DP   R  P+ ++  L + I+ L+  E  ++   L + L +    ++      + G
Sbjct: 44  PSVYDPYGPRPQPSSKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMI-----SSDG 103

Query: 124 LGGMAMKASTAAKEEKKPEKTVYELKLESYEASAKIKIIKEVRSFTDLGLKEAKDLVEKT 183
           +G  A + + A   E+K EKT +++KLE + AS KIK+IKEVR+FT LGLKEAK+LVEK 
Sbjct: 104 IG--AKQDTGAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKV 163

Query: 184 PSVLKKGLSKEEGEQLIEKMKALGAKVILE 214
           P++LK+G++KEE  ++I K+KA+G   ++E
Sbjct: 164 PAILKQGVTKEEANEIIAKIKAVGGIAVME 186

The following BLAST results are available for this feature:
BLAST of Moc03g29110 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137691.12.5e-107100.00uncharacterized protein LOC111009067 [Momordica charantia][more]
XP_038876937.15.0e-10093.4950S ribosomal protein L7/L12 [Benincasa hispida][more]
XP_022954769.12.4e-9490.65uncharacterized protein LOC111456924 [Cucurbita moschata] >XP_022954770.1 unchar... [more]
KAG6584188.17.0e-9491.1250S ribosomal protein L7/L12, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
XP_023542773.17.0e-9490.65uncharacterized protein LOC111802581 [Cucurbita pepo subsp. pepo][more]
BLAST of Moc03g29110 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9USJ93.8e-1840.7454S ribosomal protein L12, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
P411895.5e-1743.8550S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=... [more]
P531633.6e-1640.8254S ribosomal protein L12, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
A5ELN87.9e-1641.6750S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182... [more]
A4YSI01.0e-1541.6750S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN... [more]
BLAST of Moc03g29110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C7E31.2e-107100.00uncharacterized protein LOC111009067 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1GU051.2e-9490.65uncharacterized protein LOC111456924 OS=Cucurbita moschata OX=3662 GN=LOC1114569... [more]
A0A6J1JZ856.4e-9389.72uncharacterized protein LOC111490181 OS=Cucurbita maxima OX=3661 GN=LOC111490181... [more]
A0A6J1KHE71.9e-9290.19uncharacterized protein LOC111495277 OS=Cucurbita maxima OX=3661 GN=LOC111495277... [more]
A0A6J1E8222.4e-9289.72uncharacterized protein LOC111431646 OS=Cucurbita moschata OX=3662 GN=LOC1114316... [more]
BLAST of Moc03g29110 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G70190.17.3e-6564.06Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/a... [more]
AT1G70190.27.3e-6564.06Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/a... [more]
AT4G36420.18.1e-3251.72Ribosomal protein L12 family protein [more]
AT4G37660.12.6e-2243.07Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
AT3G06040.13.4e-2239.33Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 83..123
e-value: 1.9E-9
score: 37.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 143..212
e-value: 5.2E-21
score: 76.5
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 146..212
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilyGENE3D1.20.5.710Single helix bincoord: 81..142
e-value: 1.6E-6
score: 30.0
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILY48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 82..123
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 147..212
e-value: 1.8E-20
score: 73.1
IPR000206Ribosomal protein L7/L12PANTHERPTHR4598739S RIBOSOMAL PROTEIN L12coord: 7..213
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 77..213
score: 17.219284
IPR000206Ribosomal protein L7/L12CDDcd00387Ribosomal_L7_L12coord: 79..212
e-value: 3.33807E-46
score: 147.302
NoneNo IPR availablePANTHERPTHR45987:SF1450S RIBOSOMAL PROTEIN L7/L12coord: 7..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g29110.1Moc03g29110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome