Sed0021955 (gene) Chayote v1

Overview


Name	Sed0021955
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PLATZ transcription factor family protein
Location	LG11: 1653261 .. 1654407 (+)
RNA-Seq Expression	Sed0021955
Synteny	Sed0021955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTTGGGGTTTTGGATGTTCAATTCTTGGTGGGGTTTTAAGATTGATTTTTTAATTATGATGTTTGTTTTAGGGAATTCAACAGCCTGCATGGTTAGAAGCACTTTACAGCCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTGAAAAGAAGAATGAGAAGAACATTTATTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCTTGGCACCGATTTCATCGCCTTCTTCAAGTGCGTCGATATGTTTATCACGACGTTGTTCGACTCGAAGATCTTCAAAAGCTTATAGATTGTTCTAATGTTCAGGTTAGTAGTTGAAAAATATGTTAAATTATAATCAATTTTAAATTTCTTCCCCTTCCTCTCATGCAATTGAGCTTAATTAATTAGCTAATTTGGTGGAATTTTATTTGTGTTCTTAGCCTTATACCATAAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAGTAGACAATTTAAAGGGTCGGGAAATAATTGCACTTCTTGTGATCGAAGTCTTCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTACATAATTGTATATTCATTTTGCCCTAAATTTTAACTTCTTTTTTTTAAATCCCTAAATTTCAACTCACTAAGGTTTAAATTGAGTTAATTCTAAAGGTTCTTGCTAAATTTTGTTGATTATTTTTCATAGAAAGCTTCACAAAACATGATATTTGATTTAGTTTTCACATTAAATGTTAAAAGGGTTTTTGAAAGATCATTAATTTTATTGAATTTTAATCAATCAGGTGGATTTTGTGTTGAAGTATAAGGGAGATTTGACTTCCTATCTTAGATCATGCCATTCTCTCCCACTCAATATGGATTTTTTAGGTCCACAAGATATGGGAGACGATGAGATGACAAACGAGACTCCTCGCTCTACCGTTGTTGACTACGACGAACTTATGAGCTCATCTTCAGGATCTGAAAACATGAGCATAACTCACATACCAATCGTTCGAAAGAAGAGAAGTGGACTTTGCAATATGTGTGGAAAATCCTCTACAAAGATATCTAATGAAGACATGGCAACAAGCATAAGTAGAAGGAAAAGCATCCCTCATAGATCTCCTTTGTGTTAA

mRNA sequence

ATGTCTTTTTGGGGTTTTGGATGTTCAATTCTTGGTGGGGGAATTCAACAGCCTGCATGGTTAGAAGCACTTTACAGCCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTGAAAAGAAGAATGAGAAGAACATTTATTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCTTGGCACCGATTTCATCGCCTTCTTCAAGTGCGTCGATATGTTTATCACGACGTTGTTCGACTCGAAGATCTTCAAAAGCTTATAGATTGTTCTAATGTTCAGCCTTATACCATAAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAGTAGACAATTTAAAGGGTCGGGAAATAATTGCACTTCTTGTGATCGAAGTCTTCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTGGATTTTGTGTTGAAGTATAAGGGAGATTTGACTTCCTATCTTAGATCATGCCATTCTCTCCCACTCAATATGGATTTTTTAGGTCCACAAGATATGGGAGACGATGAGATGACAAACGAGACTCCTCGCTCTACCGTTGTTGACTACGACGAACTTATGAGCTCATCTTCAGGATCTGAAAACATGAGCATAACTCACATACCAATCGTTCGAAAGAAGAGAAGTGGACTTTGCAATATGTGTGGAAAATCCTCTACAAAGATATCTAATGAAGACATGGCAACAAGCATAAGTAGAAGGAAAAGCATCCCTCATAGATCTCCTTTGTGTTAA

Coding sequence (CDS)

ATGTCTTTTTGGGGTTTTGGATGTTCAATTCTTGGTGGGGGAATTCAACAGCCTGCATGGTTAGAAGCACTTTACAGCCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTGAAAAGAAGAATGAGAAGAACATTTATTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCTTGGCACCGATTTCATCGCCTTCTTCAAGTGCGTCGATATGTTTATCACGACGTTGTTCGACTCGAAGATCTTCAAAAGCTTATAGATTGTTCTAATGTTCAGCCTTATACCATAAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAGTAGACAATTTAAAGGGTCGGGAAATAATTGCACTTCTTGTGATCGAAGTCTTCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTGGATTTTGTGTTGAAGTATAAGGGAGATTTGACTTCCTATCTTAGATCATGCCATTCTCTCCCACTCAATATGGATTTTTTAGGTCCACAAGATATGGGAGACGATGAGATGACAAACGAGACTCCTCGCTCTACCGTTGTTGACTACGACGAACTTATGAGCTCATCTTCAGGATCTGAAAACATGAGCATAACTCACATACCAATCGTTCGAAAGAAGAGAAGTGGACTTTGCAATATGTGTGGAAAATCCTCTACAAAGATATCTAATGAAGACATGGCAACAAGCATAAGTAGAAGGAAAAGCATCCCTCATAGATCTCCTTTGTGTTAA

Protein sequence

MSFWGFGCSILGGGIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMATSISRRKSIPHRSPLC

Homology

[Close]

BLAST of Sed0021955 vs. NCBI nr
Match: XP_038889372.1 (uncharacterized protein LOC120079291 [Benincasa hispida])

HSP 1 Score: 439.9 bits (1130), Expect = 1.5e-119
Identity = 214/246 (86.99%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 10  ILGGGIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLL 69
           I+  GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLL
Sbjct: 25  IISEGIQKPAWLEALYNQKFFVGCSFHETAKKNEKNICCLDCCISICPHCLSSHRFHRLL 84

Query: 70  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRS 129
           QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRS
Sbjct: 85  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRS 144

Query: 130 LQEPYIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTV 189
           LQEPY+HCSLGCKVDFVLK+K DLTSYLRSC+SLPL+MDFL PQ++GDDEMTNETPRSTV
Sbjct: 145 LQEPYVHCSLGCKVDFVLKHKRDLTSYLRSCNSLPLSMDFLVPQEVGDDEMTNETPRSTV 204

Query: 190 VDYDELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMAT--SISRRKSIP 249
           VDYDE MSSSSGSENMSI   PIVRKKRSGLC +CG+S+ KIS+ED+AT  SISRRK IP
Sbjct: 205 VDYDEPMSSSSGSENMSIAQPPIVRKKRSGLC-LCGRSTRKISSEDIATSMSISRRKGIP 264

Query: 250 HRSPLC 254
           HRSPLC
Sbjct: 265 HRSPLC 269

[Close]

BLAST of Sed0021955 vs. NCBI nr
Match: XP_008456605.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 4.4e-119
Identity = 213/242 (88.02%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMAT--SISRRKSIPHRSP 253
           E MSSSSGSENMSI   PIVRKKRSGLC +CG+SS KIS+ED+AT  SISRRK IPHRSP
Sbjct: 182 EPMSSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKISSEDIATSISISRRKGIPHRSP 241

[Close]

BLAST of Sed0021955 vs. NCBI nr
Match: XP_011648727.1 (uncharacterized protein LOC101202757 [Cucumis sativus] >KGN60754.1 hypothetical protein Csa_019212 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 8.2e-118
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTK-ISNEDMAT--SISRRKSIPHRS 253
           E MSSSSGSENMSI   PIVRKKRSGLC +CG+SS K IS+ED+AT  SISRRK IPHRS
Sbjct: 182 EPMSSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKIISSEDIATSMSISRRKGIPHRS 241

[Close]

BLAST of Sed0021955 vs. NCBI nr
Match: XP_008456613.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 210/239 (87.87%), Postives = 223/239 (93.31%), Query Frame = 0


Query: 17  QPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRRYVY 76
           +PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 77  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIH 136
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 137 CSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDELM 196
           CSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYDE M
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 197 SSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMAT--SISRRKSIPHRSPLC 254
           SSSSGSENMSI   PIVRKKRSGLC +CG+SS KIS+ED+AT  SISRRK IPHRSPLC
Sbjct: 182 SSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKISSEDIATSISISRRKGIPHRSPLC 239

[Close]

BLAST of Sed0021955 vs. NCBI nr
Match: XP_022143189.1 (uncharacterized protein LOC111013118 [Momordica charantia])

HSP 1 Score: 426.0 bits (1094), Expect = 2.2e-115
Identity = 208/243 (85.60%), Postives = 223/243 (91.77%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALYSQKFFVGCS+HET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYSQKFFVGCSYHETAKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKV++++++K DL SYL+ CHSLPL+MDFL PQDMGDDEMTNETPRSTVVDYD
Sbjct: 122 YVHCSLGCKVEYLVQHKRDLASYLKPCHSLPLSMDFLVPQDMGDDEMTNETPRSTVVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKI-SNEDMAT--SISRRKSIPHRS 253
           E MSSSSGSENMSI    IVRKKRSGLC +CG+S  KI S+EDMAT  SISRRK IPHRS
Sbjct: 182 EPMSSSSGSENMSIAQTSIVRKKRSGLC-LCGRSVRKILSSEDMATSISISRRKGIPHRS 241

[Close]

BLAST of Sed0021955 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-91
Identity = 168/256 (65.62%), Postives = 200/256 (78.12%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWL+ALY++KFFVGC +HET KKNE+N+ CLDCC S+CPHC+  HRFHRLLQVRR
Sbjct: 2   GIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQ+RQFKG+GN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQD-MGDDEM-TNETPRSTVVD 193
           YIHCSLGCKVDFV+K   D+T +L+ CH+L L  D++ PQD + DDE+   ETPRSTVVD
Sbjct: 122 YIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 181

Query: 194 YDELMS-SSSGSEN--------MSITHIPIVRKKRSGLCNMCGKSSTKISN-----EDMA 253
            DE MS SS+ S+N         + T   +VRKKR+G C +C KS+          +D++
Sbjct: 182 GDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFC-LCAKSANSYKEVSEDPDDIS 241

[Close]

BLAST of Sed0021955 vs. ExPASy TrEMBL
Match: A0A1S3C4B1 (uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119
Identity = 213/242 (88.02%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMAT--SISRRKSIPHRSP 253
           E MSSSSGSENMSI   PIVRKKRSGLC +CG+SS KIS+ED+AT  SISRRK IPHRSP
Sbjct: 182 EPMSSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKISSEDIATSISISRRKGIPHRSP 241

[Close]

BLAST of Sed0021955 vs. ExPASy TrEMBL
Match: A0A0A0LI85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.0e-118
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTK-ISNEDMAT--SISRRKSIPHRS 253
           E MSSSSGSENMSI   PIVRKKRSGLC +CG+SS K IS+ED+AT  SISRRK IPHRS
Sbjct: 182 EPMSSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKIISSEDIATSMSISRRKGIPHRS 241

[Close]

BLAST of Sed0021955 vs. ExPASy TrEMBL
Match: A0A1S3C3R2 (uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 210/239 (87.87%), Postives = 223/239 (93.31%), Query Frame = 0


Query: 17  QPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRRYVY 76
           +PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 77  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIH 136
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 137 CSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDELM 196
           CSLGCKVDFVLK+K DLTSYLR C+SLPL+MDFL PQD+GDDEMTNETPRST+VDYDE M
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 197 SSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMAT--SISRRKSIPHRSPLC 254
           SSSSGSENMSI   PIVRKKRSGLC +CG+SS KIS+ED+AT  SISRRK IPHRSPLC
Sbjct: 182 SSSSGSENMSIAQPPIVRKKRSGLC-LCGRSSRKISSEDIATSISISRRKGIPHRSPLC 239

[Close]

BLAST of Sed0021955 vs. ExPASy TrEMBL
Match: A0A6J1CNK9 (uncharacterized protein LOC111013118 OS=Momordica charantia OX=3673 GN=LOC111013118 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 208/243 (85.60%), Postives = 223/243 (91.77%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALYSQKFFVGCS+HET KKNEKNI CLDCCISICPHCLS HRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYSQKFFVGCSYHETAKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           Y+HCSLGCKV++++++K DL SYL+ CHSLPL+MDFL PQDMGDDEMTNETPRSTVVDYD
Sbjct: 122 YVHCSLGCKVEYLVQHKRDLASYLKPCHSLPLSMDFLVPQDMGDDEMTNETPRSTVVDYD 181

Query: 194 ELMSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKI-SNEDMAT--SISRRKSIPHRS 253
           E MSSSSGSENMSI    IVRKKRSGLC +CG+S  KI S+EDMAT  SISRRK IPHRS
Sbjct: 182 EPMSSSSGSENMSIAQTSIVRKKRSGLC-LCGRSVRKILSSEDMATSISISRRKGIPHRS 241

[Close]

BLAST of Sed0021955 vs. ExPASy TrEMBL
Match: A0A6J1FHQ2 (uncharacterized protein LOC111444245 OS=Cucurbita moschata OX=3662 GN=LOC111444245 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.3e-112
Identity = 204/243 (83.95%), Postives = 222/243 (91.36%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWLEALY+QKFFVGCSFHET KKNEKNI CLDCCISICPHC+S HRFHRLLQVRR
Sbjct: 5   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 64

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQ+RQFKGSGN CTSC RSLQEP
Sbjct: 65  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 124

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYD 193
           YIHCSLGCKVDFVLK+K +L+SYL+ C+SLPL+MDFL  QDMGDDEMTNETP ST+VDYD
Sbjct: 125 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFL-VQDMGDDEMTNETPHSTIVDYD 184

Query: 194 ELM-SSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMATSIS--RRKSIPHRS 253
           E M SSSSGSE MSI H PI+RKKR+G+  +CG+S++KISNEDM TSIS  RRK IPHRS
Sbjct: 185 EPMSSSSSGSETMSIPHTPIIRKKRTGV-YLCGRSTSKISNEDMTTSISINRRKGIPHRS 244

[Close]

BLAST of Sed0021955 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-92
Identity = 168/256 (65.62%), Postives = 200/256 (78.12%), Query Frame = 0


Query: 14  GIQQPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRR 73
           GIQ+PAWL+ALY++KFFVGC +HET KKNE+N+ CLDCC S+CPHC+  HRFHRLLQVRR
Sbjct: 2   GIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRR 61

Query: 74  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEP 133
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQ+RQFKG+GN CTSCDRSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 121

Query: 134 YIHCSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQD-MGDDEM-TNETPRSTVVD 193
           YIHCSLGCKVDFV+K   D+T +L+ CH+L L  D++ PQD + DDE+   ETPRSTVVD
Sbjct: 122 YIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 181

Query: 194 YDELMS-SSSGSEN--------MSITHIPIVRKKRSGLCNMCGKSSTKISN-----EDMA 253
            DE MS SS+ S+N         + T   +VRKKR+G C +C KS+          +D++
Sbjct: 182 GDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFC-LCAKSANSYKEVSEDPDDIS 241

[Close]

BLAST of Sed0021955 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-61
Identity = 123/249 (49.40%), Postives = 155/249 (62.25%), Query Frame = 0


Query: 18  PAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRRYVYH 77
           PAWLE L   KFF  C  HE +KKNEKNI C+DCC++ICPHCLS H  HRLLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 78  DVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIHC 137
           DV+R+ED  KL+DCS +QPYT NS+KVVFI +RPQSRQF+GSGN C +CDRSLQ PY+ C
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYLFC 126

Query: 138 SLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTV--VDYDEL 197
            L CK+  V+  +  L+ +LR C+ L L            DE+T  TP ST+     +  
Sbjct: 127 CLSCKISDVIMRQRGLSGFLRVCNVLDLT-----------DEVTTTTPSSTLEPTGSNRT 186

Query: 198 MSSSSGSENMSI---------THIPIVRKKRSGLCNMCGKSSTKIS---NEDMATSISRR 253
            S SSG+E   +             IVRKKRS L   C + +  +S    E     ++RR
Sbjct: 187 SSESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRR 244

[Close]

BLAST of Sed0021955 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-52
Identity = 113/236 (47.88%), Postives = 148/236 (62.71%), Query Frame = 0


Query: 17  QPAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCCISICPHCLSWHRFHRLLQVRRYVY 76
           +PAWLE L ++ FF  C  HET +K+EKN++CL CC+S+CPHCL  HR H LLQVRRYVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 77  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIH 136
           HDVVRL DL+KLIDCS VQPYTIN AKV+F+ +R QSR  K S N C +CDR LQEP+  
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRA-KVSSNVCFTCDRILQEPFHF 137

Query: 137 CSLGCKVDFVLKYKG-DLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDEL 196
           CSL CKVD+ L Y+G DL+S L        +  F G +  G D++      ST+ D +++
Sbjct: 138 CSLSCKVDY-LSYQGDDLSSILYRIDE--SDFTFEGLRMDGHDQLGE---ISTMEDGEDI 197

Query: 197 MSSSSGSENMSITHIPIVRKKRSGLCNMCGKSSTKISNEDMATSISRRKSIPHRSP 252
           +  S  SE  + +H     KK           S  +    +++  +RRK  PHR+P
Sbjct: 198 LVISDESEQGNNSH-----KKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of Sed0021955 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-34
Identity = 91/239 (38.08%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 18  PAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCC-ISICPHCLSWHRFHRLLQVRRYVY 77
           P WL  +    +FV CS H    KNE N++CLDC   + C +CL  H+ HR++Q+RR  Y
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSY 75

Query: 78  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIH 137
           H+VVR+ ++QK ID + VQ Y INSAK+VF+ +RPQ R  KG  N C  C RSL + +  
Sbjct: 76  HNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRF 135

Query: 138 CSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDELM 197
           CSLGCK+  + +    LT  L+  H      ++LG  +   DE T  T       ++ LM
Sbjct: 136 CSLGCKLGGMRRGDLSLTFSLKGKH----GREYLGGSE--SDEATTPTKMRKTNAFNRLM 195

Query: 198 SSSSGSENMSITHIPIVRKKRSGLCNMCGKS----STKISNEDMATSISRRKSIPHRSP 252
           S  S S      + P   ++ S   +  G S    +  I N     + SRRK +PHR+P
Sbjct: 196 SGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNH---RNSSRRKGVPHRAP 245

[Close]

BLAST of Sed0021955 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-34
Identity = 91/239 (38.08%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 18  PAWLEALYSQKFFVGCSFHETEKKNEKNIYCLDCC-ISICPHCLSWHRFHRLLQVRRYVY 77
           P WL  +    +FV CS H    KNE N++CLDC   + C +CL  H+ HR++Q+RR  Y
Sbjct: 13  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSY 72

Query: 78  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQSRQFKGSGNNCTSCDRSLQEPYIH 137
           H+VVR+ ++QK ID + VQ Y INSAK+VF+ +RPQ R  KG  N C  C RSL + +  
Sbjct: 73  HNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRF 132

Query: 138 CSLGCKVDFVLKYKGDLTSYLRSCHSLPLNMDFLGPQDMGDDEMTNETPRSTVVDYDELM 197
           CSLGCK+  + +    LT  L+  H      ++LG  +   DE T  T       ++ LM
Sbjct: 133 CSLGCKLGGMRRGDLSLTFSLKGKH----GREYLGGSE--SDEATTPTKMRKTNAFNRLM 192

Query: 198 SSSSGSENMSITHIPIVRKKRSGLCNMCGKS----STKISNEDMATSISRRKSIPHRSP 252
           S  S S      + P   ++ S   +  G S    +  I N     + SRRK +PHR+P
Sbjct: 193 SGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNH---RNSSRRKGVPHRAP 242

The following BLAST results are available for this feature:

BLAST of Sed0021955 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889372.1	1.5e-119	86.99	uncharacterized protein LOC120079291 [Benincasa hispida]	[more]
XP_008456605.1	4.4e-119	88.02	PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo]	[more]
XP_011648727.1	8.2e-118	87.65	uncharacterized protein LOC101202757 [Cucumis sativus] >KGN60754.1 hypothetical ...	[more]
XP_008456613.1	2.4e-117	87.87	PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo]	[more]
XP_022143189.1	2.2e-115	85.60	uncharacterized protein LOC111013118 [Momordica charantia]	[more]

BLAST of Sed0021955 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.8e-91	65.63	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0021955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C4B1	2.1e-119	88.02	uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LI85	4.0e-118	87.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1	[more]
A0A1S3C3R2	1.2e-117	87.87	uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CNK9	1.1e-115	85.60	uncharacterized protein LOC111013118 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1FHQ2	3.3e-112	83.95	uncharacterized protein LOC111444245 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]

BLAST of Sed0021955 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12646.1	1.3e-92	65.63	PLATZ transcription factor family protein	[more]
AT3G60670.1	3.4e-61	49.40	PLATZ transcription factor family protein	[more]
AT1G31040.1	8.4e-52	47.88	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.6e-34	38.08	PLATZ transcription factor family protein	[more]
AT1G21000.2	1.6e-34	38.08	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 72..143 e-value: 1.6E-26 score: 92.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..253
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 14..253
None	No IPR available	PANTHER	PTHR31065:SF11	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 14..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0021955.1	Sed0021955.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010078	maintenance of root meristem identity
biological_process	GO:2000377	regulation of reactive oxygen species metabolic process
biological_process	GO:2000280	regulation of root development
biological_process	GO:0043434	response to peptide hormone
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008270	zinc ion binding