Moc08g18720 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g18720
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr8: 14133232 .. 14141097 (+)
RNA-Seq Expression	Moc08g18720
Synteny	Moc08g18720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTTGCAACGTCCTGCTCAACCATCTCATTCCAATCCTTGTCAGTCATCCCCGTTGGTCTCTCCCCAAAGTTTTGTGTATCTTCTTGCACGTAAGAAGGTCTTTTATTTGCATCTTCCAAAAACTGAAATTCTCTCCAGTGATCTTCAGAATCCCTTCATATTAATAGTGTGCATGATATTTGTCTCCCATGATTCTGCAACCTACGCTCCGATACCACTTATTAAGGACAACAGTACCCCTCATACCCCGAGTATCTCCATAGTGGTATGATATTGTCCGCTTTGGGCATAGCCTTTACGGCTTTACTTTTGGTTCCTCCCAAAAGACCTCAGACCAATGAAGATAATTGTCCTCTCTTATATACCATGGATCATTCCCTAGCCAATGTGGGACTTTGTTTGCACTCCTTAGAAACCCAACAATCCTCCCCTCGAACAAAGTGTCACTTGTATATTGCCTCGAATAGTCATTCATGATAATATAAAATACAACACTAACTATGTCTAGAAGCTTCTCGAGGTATCTACACAACATAATTTTTCTCTAGAATGTTGTAAATAAATATCTAAAGAAAATTATCTATAAATGTCTTAGCTTTTCCTTAGGCTCCAAGGGATTCTAGTGAATTCCTTTGGATAAGGATATATTGATTAGAAGTATCTAGAATATGTGAGTTACAAGAAGGGCATAGATCGATCCTTTTCGTCCTATAAATAGGAGAGATGTACCCATAAATCAATCAGGTGAATCAAGTGAAGAGAGTTAATCAAGTGAAGTGAGTGAAGAAAGAGAGAAAAGTTAGAAAGTGTGAGAGAGTTTTCCATCAAATAGTGTTGATAATTTTTCATACGAGTGCGTTTTATGACATAATTTGGGCAATTTTGTAGTGTAAATGTGAGAGTCATTATCAAAAGGGCATGGAAAATAGAAGAAATCACTTAGTTATGTCCCTGAGCTATTAGAATTCTCAATTCTCTTATTTCGAATGAATTATGCTTAATTATGGATATTTTGTATAGGAATTGGAGAATTTGTTGAAGGCAAGCCAAGTGCTTCCAAGGCTGTGAAATTGTTACTGGAGCATGGCAGGAAGATGCATTTATGCTAGAGCCGAAAGCCATTCAGAATGCTCTAGAGCGTGTGACCGCGCAATAATTTATTTGCTCCAGTTTTACCGTGTCCGTACAGCCTCCTGGTGGTGCCCTAATTTTTAAGGATGCGATATAAATAGAAGAACAGTGCCCAGCCGCCACAAAGAGCCCCAGAACAGAAAATCCATTTGGGCATCGAAATTAGAGAACATTCCTCACCCATTTCGAAGAGAAGTCAACGAAGAAGAAGTCGAACATTGCATCTCACTGAGCTGGGGGAATCTTCACTGTTGCTGAAGCTTCCTTACTCAATGGTCTACATTTCTTCTCTACCCATTCTTCTCTTTTTCTTTTTTTGTGTTATGAACTAAACCCCACTTTCATGGGGGATGAACTCGTTGTAGCTCTTGTTTATTTATGTTTTAGTAACTCACATATATTTAGGGTGATTTAATAGAGGTGTTTTTATTCTTTCATCACACTGATTTTGTTTGGCCAACATTATTAGTTTGCTATGCTCACTTGAGGCTTGGAAAAGTTCTGGTGTTGCGTGTTTGCCTCTATTTAAGTTAGATTTCTCTCTTTGAAGTAGAATGATGAGTACTCATCGATGAGACTCACCCTTTCATGCCTATAAACTGTATGTATTGTTTGTTTAGTCTACAACAGGAGTTGGGGTTAAACATGTTTAGGTATCTCGGGAGAGAGCCATGTCTGTTTGGGCATTCAGTATTTTGAGTTTACTAGAGCATAGCTAGACGTGAGTGAGAGCATTAGAGTGATTCCCCCTCGATTTACCCTCATTTTGGCATTTTTTGCTTGTTTTTCGTTTTCAGATGCTCTAGAGCAGAATCGCAAAATATTTATGTTCTTGCTCATTAACTGTTTTTGTTGATTTCCTTTACAGCATCCATACAACATTAATATTTTATTTTTAATTTTGCTTTTTGGTATTCAAATTTACTATTTTAAGTAAAACTGTAATCCCTGTGGAGATGACCTTGTTTTTATACTACAACAGATTGTTTTGGTGTATACTTGCACCAATTTTCTCCTAGTTGTGAGGAAGCGAACAAGTGTCCATATTCATATTTCCCTAATAAAAGTTTCTTTCTTCAAGCAATTGTCTCTTTCCTTTTTGTGCTAATTTATTCAACAAGTGGTATCAAAACCAAGCTAACATAACTTGTTTTGGTGGAGCTTCTGAAGATGGTAAACAGTTTGAGATTGTGAAGCTTGTTGTCTGGGACATAGCCGTGGTGTGCATCCATCACTACAAGATGATGGGAGGAGACCTTCAAGTTGTTGGAGGAGTCAAGAAGCTCAACACGCAAAATTACAAAATATGGTCCACTTGCATGGAATTGTATCTCCAAGAGCAAGACTTATGGGAAGTCTTTGGAGCTAGTGAAGTCACGCCACCGGAAGATGCAATAGCCTTGAAGAAATGGAAGGTCAAGGCAGGTAAGGCCATGATTACTATCAAAAGTACTATTGATGAAGAAATGGTGGAGCACATTAGGAATGCAGAGACCCAAAAAGTGGCATGGGACACATTTGCTTCACTCTTTTTAAAGAAAAATGTTGCAAAGTTGCAGCTTCTGGAGAACAAGCTTCTTTCGATTGCTCAGTGGGAGATGATAATAAATAAGTACTAATAAATAAGTACTTCAACAAGGTAAAAACCTCTTTATCGTGAAATCTCTGAATTAGATGCTACTACTACTATTTCTGAATCAAGAATGAGGAGAATTGTTATTCATGGCTTTAAACCGGAATATAGAAACTTCATTATTGCTATTCAAGGTTGGTTAGTCCAACCTTCTCTTATTGACATAGAAAATATGCTTGTCGATTAAGAAGCATTGACCAAGCAAATTTCAGGGGTCACACTAAAGAGCAATCATGAAGAAGCGCTCTTTAGTGGTAAAAGAAAGGCCATCCAAAGTATAAAAAAAAAGTAGTATCAAAAGTGGAGGAGCTCAAGAACGCTTTCAAGTAAGGGAGTGCTAATAAAAATAATAAAAAAATATGATCATAGAAGAAAAGACGAATACTATAATTGTGGAAAATAGGCCATTATGCTCGAGATTGTCGCCTACAAAAGAAGCCTGTAGAAAGTAATGCAGCGACCTCCCAAATGGAGAGTACTAGTGAAGAGGAGTGGGATGCAGAGGCATTATTTGCTTCAGCAAAACCTAACTCACAATCAACATCCAGTACGATGGAGAAAGAAGACTCGGCTCTCAATGCAAAACAGGTAAATTGTGAGAAAAATCGAATTGTTGTTTCAAGCTGCTCTAACTATATGACAGGTGGTAAAAAGAAGCTGTAAATAAATATGATAGAGTACAAAGGGAGTCGAGTTATTGTAACTGGAAGCAACTCGAAATTGTCTATAACTGATGTTGGCAGGACAATATTGCCTTGCTCCAATTCCAATCAAGTGGAGTTAAAGAACGAATTTTGTGTAACTTTGTCTTGTTTGGTCCTGACGGTATTAAGGTGTATCAAGATCTCAAAGTCAATAGTACGCCATTGATGAAATGGAGAAAAATATACTCCATTTATGACATGTTAGTAAAGGCCGCTTACGTGAATCATACACGGAAAAGTGAGGCAACAAATTTGTTGCATGCAAGACTAGTCATGTCAGCTACAACAAATTGAAAATGATAACGAGCAATTCTATTCTTAAGGGGCTGCCTCAACTTCATGTTGGAGAAGATATGGCATGTTGGATACTAGCATGAGAAGGCACATCAACTACCATTTAATGAGTATGAATTCAAGGCAAGGCAAACGTTGGAGTTAGTGCACTCTTAATGTTGGAGATGAAAACACTTTCAAAGAAAGATCATACAAAAGATGAGTAAAGTACGACAAGCTTTAATAAAAGTTGAAGAAGATCTTCTAGAAGAAAACAACAAAGAGGAAGAAGAGAACAGTTAAGCACACCGGATCCTTGGAAAAGTGGAATAGATGATCAAGAGCCACAATTACTGAGGTCAACGAGAGAAAGAAAACCAAATCCCAGATATGTTAATGCAGCATTAGCAACATATAAAGCGCCGAGACATACGAAGAAACATCTCAAAGCATCCAATGGAGAAAGGCCGTGAAGGATGTTAGGGTTGACTTTTTACTGTAGAAACATGTGTCGGTAGCCCTGTTTGACCACGTTTTTGACCCATTTCCCATTATTATTTACCAAAAAGAACCACATATTCTTAAAGTAGAACATGCATAGATTATTTCTGCATAAAAGTCAAACTATTGTACTTTAGGAAAAATATGAGATAAATACGGTCAAAGTTGGAAGAAAATAACAGAATTCTGTTTTTGTAGAATTGCGCCCAGCGCATTTTTGGACGGCAATTTGTCAAAACGCACGTTTTGATTAATGAATGGCAAGGAGGACATTTCCCACATGTTCAAAATCGTGAGTCCAAGTCCAAGTGAGGTGGTTAGGTGAATCTCAACCCTTTTCCACCTAAAATGGAGGGGAGTTTCAACCAACCTATGGTGCTATAAAAGGAAGTCATCCATCCCTCAGTAAAACATCCCTTCCAAGCTTCATTTCATCTTCTTTTAGATGCTCTCTAATTGTAGAACACGTTTTTAGGGTTTATGTTCATGTTCTAGTTGTTCATTTCTTCGTTTTTCACGCTTTTACCTTTCGTAGTGCTTTTAATTTGAGTTCTTATTTCTGTTCTTTGTTCATTCTATTATCTTAAAGTTCTTTAGCGAGTTTCAACTCCCCTCACGCTCGAGAGAGAAGAGGGTCAAGCTAGAACTTCTTGTACGGCTTATTTATTTATTTAAATTCAATGAAAAATACTTTCTTTATGTTTTCGTGCATTTACTTTCATTTAATTATGTTCTAAATTAGTTATCAACCTCCATGTGGAATGTCTTAGTCAAATTATTTGATTTTCAACATGCTCTGGATTTTGGCCAGATTGCGCCTAGCACTTTTTTGGGTTGGTTTCTAAAAACTTCTCTTTACGTCTTTTTTCCATTTGGCCAGTGGGAACTTGATTTATACACCAAAGCCCAACCTTGGGAAAGGTGAGTAAGGTACAATAATAGGAAACCAATATGGGATGTGACTTAGGAATAAGGGCATAAAACATGGTCCTAAGCATAGGCCCTCTGACCCATAATGCAAATGAGTTGGTAGATATTCTCTAGGACTGTAATCACACATAGAAATATGATTGTAGGTTACGTTAGCCTCTGCAGCAACCAAAAGCGGTAGTGAAATAAGAGAACTCAAATCCCAAGAAAAGTCAGGAATTGCGCATGGCGCATTTTCCAAACATAGTGTGTTTTCCACGTTTTGCATCAAACCAAGGTAAGAGACAAGGAGGTTGAGTTTTATTAAATTGCTTGTTAGTTAAAAGCTCAAACAACAACATTTCATCACATTTTTCTTTTTAAATCACAATTGCATATTTGAACCTTTCACTTCTTAAAAATTGTTTTGAAAAGCAACAAGTCCCTGAAGATTCGACCTTGGATTACTTCCGAGTATTCCTTGTGACCGTGTGCGCTTGCACGAGTCTCTAATCTTTTAAAAGGTAGAGAAAGTCCCAATAAAGGAAGAAGTGGATGCATCAAGAAGAAATCGAACACGTGTTTTGGTGCCAAAGGGCTAGGACCATCAAAGCATACAGAGTTCCAGCAACAACTCAGATGATTGAAAGAGATAGAATAGTCAGTGTTGAGGGGGAGTGTTAAAAAAAAATACAACACTAACTATGTCTAGAAGCTTCTTGAGGTATCTACACAGCATAAGTTTTCTCTAGAATATTGTAAATAAATATCTAAAGAAAATGATCTAGAAATGTTTCAGCTTTTCCTTGGGCTCCGAGGAATTCTAGAGAATTCTTTTGGATAAGGATAGATTAATTAGAAGTATCTAGAATATGTGAGTTACAAGAAGGGCTTAGAAAAATCTATCTATTGGGATACTTTTCCTCCTAAGAGATGTACCCATAAGTGAATCAAGTGAATTAAGTGAAGTGAGTAACAAAAGAGAGGGAAGTTAAAAGTGTGAGATAGTCTTCCATCAAATAGTGTCCATATTCATACTTCCCTAATAAAACTTTCATTCTTCAAGCGATTGTCTCTTTCCTTTTGTGCTAATTTATTCAACAATGTACTCATCTAGTTGAGTTAGGAACGAGAGCCTACTTCTTTCTAGAACATCCAGATAAAGCACTCATTACACGAACCACCTTGTGGGAACACCAGGTGTCTTTCTATCGCACCTTCAATCTCCTCCCCTCGAACAAAGATACATCACTCATCCTATCAGTCTACCCGATTGTGATTGGCTTTCTATCAATCTACCCCAACTTTATAGGGCATATCTTGCTCGTCAACTGAGCCCAAAGCATGTCTTGGCTCGCCACTTTGAGCACTTTTTGTTTGATTTTGAGATCCATCCACGAGTTCCGTAATGACTATTAGGCTTACCAATCCCTCTTGTCTGGTTCCTGAGGATTCCTCTCACACATCTAGTTTTTTTTACCATGGCTCTTGTCATATGGAACAATACGGTTCATACGAGAATGGAAATGGACTGTAAAAGAAGGAGGAAGAACTGAGACCACCGATGACTGAGGTCGGCCTAAAGTATAAGGGTCGGCCCACGTAAGAGGCGACCCCACCTCGGCACTGAGGTGTCGAGCCCTTCTCGGCTCTAGGTTGAGAAGGTTCTCGACCTCTTTCTCTCTCAATCGCAGCGCCAATCAAACGATGTTTGAGCCTAAACCTCGATTAAAGGGCCCGCAAGTGTCACGACCCAGTAAGCCCGACTATCTGGAGATGACCTAGGGCTGGAGTTCGTGAAACCCTATGAGGAAGATCAACCATAAATATAGAGGGAACCTCCCATTGAAGGTAAGCAAAAATAACACTTCAAGTACCCTACTTGCTCAGTGATTCTCCTATGACTAACTTAGGCATCAGAGCTCGTGTGATGGTAGTCACACCGGTTTAGGGTTGTTCAGTTTTACTGGTATTCGGTCCTTGGATAATCAAGTTTGGTAAGCAGTTTGGAGGAAGCCGATCAACCAAAATCCAAGCATCAATAATTGGCACCGTCTGTGGGGAGGATAAGATTAGCCGAGACGAAGCCCAGATCTGAGGAGGGATGGAATGAAGCAAGTTGATACAAACCCTGGTGGAAGTCAACAATGTTTCGAAAAGAAGAGCCCAAATGTGGTAGTCGGCTGCTCGAGGGAAATATGCCCGAGCCCTGGTCATCAACTAAATCCGACCAGCTTCGACAAGGGAGAACCGGCTGAAGAGGTGGAGTCTATCCCCTTAACATCCGAGGATCGACAGGTCAATATTGGAACCAAGTTGGGGAATGAGAAAATAATGAGCCTTATAAGTTTCCTCAGAAGCAACACTGATGTGTTCACTGATTACGCTTGTTTACATGCGTAAAACGAAGGTTTTAGATGCTGTTTTTACTATGTTTCAGCTTTGTTTCGGATTTTTCTCGGTCGTTTGAGTTCCAATTCATGCAAAATTCATATATTATGGTTTTTGGTTGGCTTATATTGTATTTATGACATTTTAGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGTCGGAAATACCTACATGGGAGGCGCCTGGCGCCTGGGAAGGCTGCAGAAAACAGTTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCCATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAG

mRNA sequence

ATGTGTTTGCAACGTCCTGCTCAACCATCTCATTCCAATCCTTGTCAGTCATCCCCGTTGGTCTCTCCCCAAAGTTTTGTGTATCTTCTTGCACGTAAGAAGGTCTTTTATTTGCATCTTCCAAAAACTGAAATTCTCTCCAGTGATCTTCAGAATCCCTTCATATTAATAGTGTGCATGATATTTGTCTCCCATGATTCTGCAACCTACGCTCCGATACCACTTATTAAGGACAACAGTACCCCTCATACCCCGAGTATCTCCATAGTGTGGTATCAAAACCAAGCTAACATAACTTGTTTTGGTGGAGCTTCTGAAGATGGTAAACAGTTTGAGATTGTGAAGCTTGTTGTCTGGGACATAGCCGTGGTGTGCATCCATCACTACAAGATGATGGGAGGAGACCTTCAAGTTGTTGGAGGAGTCAAGAAGCTCAACACGCAAAATTACAAAATATGGTCCACTTGCATGGAATTGTATCTCCAAGAGCAAGACTTATGGGAAGTCTTTGGAGCTAGTGAAGTCACGCCACCGGAAGATGCAATAGCCTTGAAGAAATGGAAGGTCAAGGCAGGTAAGGCCATGATTACTATCAAAAGTACTATTGATGAAGAAATGGTGGAGCACATTAGGAATGCAGAGACCCAAAAAGTGGCATGGGACACATTTGCTTCACTCTTTTTAAAGAAAAATGTTGCAAAGTTGCAGCTTCTGGAGAACAAGCTTCTTTCGATTGCTCAGTGGGAGATGATAATAAATAAAATGAGGAGAATTGTTATTCATGGCTTTAAACCGGAATATAGAAACTTCATTATTGCTATTCAAGGCCATTATGCTCGAGATTGTCGCCTACAAAAGAAGCCTGTAGAAAGTAATGCAGCGACCTCCCAAATGGAGAGTACTAGTGAAGAGGAGTGGGATGCAGAGGCATTATTTGCTTCAGCAAAACCTAACTCACAATCAACATCCAGTACGATGGAGAAAGAAGACTCGGCTCTCAATGCAAAACAGGACAATATTGCCTTGCTCCAATTCCAATCAAGTGGAGTTAAAGAACGAATTTTGTGTAACTTTGTCTTGTTTGGTCCTGACGGTATTAAGGTTACGTTAGCCTCTGCAGCAACCAAAAGCGGTAGTGAAATAAGAGAACTCAAATCCCAAGAAAAGTCAGGAATTGCGCATGGCGCATTTTCCAAACATAGTGTGTTTTCCACGTTTTGCATCAAACCAAGGCATCAGAGCTCGTGTGATGGTAGTCACACCGGTTTAGGGTTGTTCAGTTTTACTGGTATTCGGTCCTTGGATAATCAACCGAGACGAAGCCCAGATCTGAGGAGGGATGGAATGAAGCAAGTTGATACAAACCCTGGTGGAAGTCAACAATGTTTCGAAAAGAAGAGCCCAAATGTGGTAGTCGGCTGCTCGAGGGAAATATGCCCGAGCCCTGGTCATCAACTAAATCCGACCAGCTTCGACAAGGGAGAACCGGCTGAAGAGGTGGAGTCTATCCCCTTAACATCCGAGGATCGACAGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGTCGGAAATACCTACATGGGAGGCGCCTGGCGCCTGGGAAGGCTGCAGAAAACAGTTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCCATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAG

Coding sequence (CDS)

ATGTGTTTGCAACGTCCTGCTCAACCATCTCATTCCAATCCTTGTCAGTCATCCCCGTTGGTCTCTCCCCAAAGTTTTGTGTATCTTCTTGCACGTAAGAAGGTCTTTTATTTGCATCTTCCAAAAACTGAAATTCTCTCCAGTGATCTTCAGAATCCCTTCATATTAATAGTGTGCATGATATTTGTCTCCCATGATTCTGCAACCTACGCTCCGATACCACTTATTAAGGACAACAGTACCCCTCATACCCCGAGTATCTCCATAGTGTGGTATCAAAACCAAGCTAACATAACTTGTTTTGGTGGAGCTTCTGAAGATGGTAAACAGTTTGAGATTGTGAAGCTTGTTGTCTGGGACATAGCCGTGGTGTGCATCCATCACTACAAGATGATGGGAGGAGACCTTCAAGTTGTTGGAGGAGTCAAGAAGCTCAACACGCAAAATTACAAAATATGGTCCACTTGCATGGAATTGTATCTCCAAGAGCAAGACTTATGGGAAGTCTTTGGAGCTAGTGAAGTCACGCCACCGGAAGATGCAATAGCCTTGAAGAAATGGAAGGTCAAGGCAGGTAAGGCCATGATTACTATCAAAAGTACTATTGATGAAGAAATGGTGGAGCACATTAGGAATGCAGAGACCCAAAAAGTGGCATGGGACACATTTGCTTCACTCTTTTTAAAGAAAAATGTTGCAAAGTTGCAGCTTCTGGAGAACAAGCTTCTTTCGATTGCTCAGTGGGAGATGATAATAAATAAAATGAGGAGAATTGTTATTCATGGCTTTAAACCGGAATATAGAAACTTCATTATTGCTATTCAAGGCCATTATGCTCGAGATTGTCGCCTACAAAAGAAGCCTGTAGAAAGTAATGCAGCGACCTCCCAAATGGAGAGTACTAGTGAAGAGGAGTGGGATGCAGAGGCATTATTTGCTTCAGCAAAACCTAACTCACAATCAACATCCAGTACGATGGAGAAAGAAGACTCGGCTCTCAATGCAAAACAGGACAATATTGCCTTGCTCCAATTCCAATCAAGTGGAGTTAAAGAACGAATTTTGTGTAACTTTGTCTTGTTTGGTCCTGACGGTATTAAGGTTACGTTAGCCTCTGCAGCAACCAAAAGCGGTAGTGAAATAAGAGAACTCAAATCCCAAGAAAAGTCAGGAATTGCGCATGGCGCATTTTCCAAACATAGTGTGTTTTCCACGTTTTGCATCAAACCAAGGCATCAGAGCTCGTGTGATGGTAGTCACACCGGTTTAGGGTTGTTCAGTTTTACTGGTATTCGGTCCTTGGATAATCAACCGAGACGAAGCCCAGATCTGAGGAGGGATGGAATGAAGCAAGTTGATACAAACCCTGGTGGAAGTCAACAATGTTTCGAAAAGAAGAGCCCAAATGTGGTAGTCGGCTGCTCGAGGGAAATATGCCCGAGCCCTGGTCATCAACTAAATCCGACCAGCTTCGACAAGGGAGAACCGGCTGAAGAGGTGGAGTCTATCCCCTTAACATCCGAGGATCGACAGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGTCGGAAATACCTACATGGGAGGCGCCTGGCGCCTGGGAAGGCTGCAGAAAACAGTTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCCATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAG

Protein sequence

MCLQRPAQPSHSNPCQSSPLVSPQSFVYLLARKKVFYLHLPKTEILSSDLQNPFILIVCMIFVSHDSATYAPIPLIKDNSTPHTPSISIVWYQNQANITCFGGASEDGKQFEIVKLVVWDIAVVCIHHYKMMGGDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPPEDAIALKKWKVKAGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEMIINKMRRIVIHGFKPEYRNFIIAIQGHYARDCRLQKKPVESNAATSQMESTSEEEWDAEALFASAKPNSQSTSSTMEKEDSALNAKQDNIALLQFQSSGVKERILCNFVLFGPDGIKVTLASAATKSGSEIRELKSQEKSGIAHGAFSKHSVFSTFCIKPRHQSSCDGSHTGLGLFSFTGIRSLDNQPRRSPDLRRDGMKQVDTNPGGSQQCFEKKSPNVVVGCSREICPSPGHQLNPTSFDKGEPAEEVESIPLTSEDRQDHLGVQINQKKQKVGNTYMGGAWRLGRLQKTVFLPTLPLMKRVFPCVLVVPTDAYV

Homology

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BLAST of Moc08g18720 vs. NCBI nr
Match: KAA0037350.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ97557.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-54
Identity = 136/278 (48.92%), Postives = 156/278 (56.12%), Query Frame = 0


Query: 131 MMGGDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPPEDAIALKKWKVK 190
           MM GDLQ V G+KKLNTQNYK WSTCM+ YLQ QDLW+V G +EV PPEDA  LKKW +K
Sbjct: 1   MMMGDLQ-VKGIKKLNTQNYKTWSTCMKSYLQGQDLWDVVGGTEVNPPEDAATLKKWNIK 60

Query: 191 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 250
           AGKA   IK+TIDEEM+EHI   ET K  WDTF SLF KKN A+LQ LEN+LLSI Q E 
Sbjct: 61  AGKATFAIKTTIDEEMLEHISIMETPKKVWDTFTSLFSKKNDARLQFLENELLSITQREK 120

Query: 251 IIN-------------------------KMRRIVIHGFKPEYRNFIIAIQ---------- 310
            IN                         +MRRI+IHG K EYR+FI AIQ          
Sbjct: 121 TINQYFTKVKFLCCEISELDPTSAISESRMRRIIIHGLKSEYRSFIAAIQGWAVQPSLID 180

Query: 311 ----------------------------------GHYARDCRLQKKPVESNAATSQMEST 340
                                             GHYAR+CR +KK  ESNA TSQ +S 
Sbjct: 181 LESMLASQEALAKQISEVTIKSNNGEALFSGQRRGHYARECRCKKKIAESNAVTSQAKSI 240

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BLAST of Moc08g18720 vs. NCBI nr
Match: KAE8726439.1 (hypothetical protein F3Y22_tig00006888pilonHSYRG00009 [Hibiscus syriacus])

HSP 1 Score: 203.0 bits (515), Expect = 6.9e-48
Identity = 131/341 (38.42%), Postives = 176/341 (51.61%), Query Frame = 0


Query: 93  QNQANITCFGGASEDGKQFEIVKLVVW---DIAVVCIHHYKMMGGDLQVVGGVKKLNTQN 152
           ++++ +T    A+++ K  ++V L+V    DI V C     +  GDLQVVGG+KKLN +N
Sbjct: 234 KDRSGLTALQVAAKE-KHNQMVNLLVTNGADILVRCSQSLAVKMGDLQVVGGIKKLNNKN 293

Query: 153 YKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAIA-LKKWKVKAGKAMITIKSTIDEEM 212
           Y  W+TCME YLQ QDLWEV G  EVT P  EDA   L+KWK+KAGKAM  +K+TI+EEM
Sbjct: 294 YNTWATCMESYLQGQDLWEVVGGGEVTQPATEDANGILRKWKIKAGKAMFALKTTIEEEM 353

Query: 213 VEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEMII-------------- 272
           +EHIR+A+T K AWDTF +LF K+N  KLQLLEN+LLS+AQ +M +              
Sbjct: 354 LEHIRDAKTPKEAWDTFVTLFSKRNDTKLQLLENELLSMAQRDMAVAQYFHKVKSICREI 413

Query: 273 -----------NKMRRIVIHGFKPEYRNFIIAIQ-------------------------- 331
                       +++RI++HG +PEYR F+ A+Q                          
Sbjct: 414 SELDPTADIGEARIKRIIVHGLRPEYRGFVAAVQGWPTQPSLVEFENLLAGQEAMAKQMG 473

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BLAST of Moc08g18720 vs. NCBI nr
Match: KAE8692620.1 (tir-nbs resistance protein [Hibiscus syriacus])

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-46
Identity = 121/286 (42.31%), Postives = 153/286 (53.50%), Query Frame = 0


Query: 134 GDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAIA-LKKWKVK 193
           GDLQVVGG+KKLN +NY  W+TCME YLQ QDLWEV G  EVT P  EDA   L+KWK+K
Sbjct: 2   GDLQVVGGIKKLNNKNYNTWATCMESYLQGQDLWEVVGGGEVTQPATEDANGILRKWKIK 61

Query: 194 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 253
           AGKAM  +K+TI+EEM+EHIR+A+T K AWDTF + F K+N  KLQLLEN+LLS+AQ +M
Sbjct: 62  AGKAMFALKTTIEEEMLEHIRDAKTPKEAWDTFVTHFSKRNDTKLQLLENELLSMAQRDM 121

Query: 254 II-------------------------NKMRRIVIHGFKPEYRNFIIAIQ---------- 313
            I                          +++RI++HG +PEYR F+ A+Q          
Sbjct: 122 AIAQYFHKVKSICREISELDPTAAIGEARIKRIIVHGLRPEYRGFVAAVQGWPTQPSLVE 181

Query: 314 ---------------------------------------------------GHYARDCRL 331
                                                              GH A+DC  
Sbjct: 182 FENLLAGQEAMAKQMGGVSLKGEEKALYTSKSRGTFQRYTGNGSKNDGDKMGHMAKDCWT 241

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BLAST of Moc08g18720 vs. NCBI nr
Match: KAE8673149.1 (hypothetical protein F3Y22_tig00111810pilonHSYRG00151 [Hibiscus syriacus])

HSP 1 Score: 196.4 bits (498), Expect = 6.5e-46
Identity = 119/286 (41.61%), Postives = 153/286 (53.50%), Query Frame = 0


Query: 134 GDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAIA-LKKWKVK 193
           GDLQVVGG+KKLN +NY  W+TCME YLQ QDLWEV G  EVT P  EDA   L+KWK+K
Sbjct: 2   GDLQVVGGIKKLNNKNYNTWATCMESYLQGQDLWEVVGGGEVTQPATEDANGILRKWKIK 61

Query: 194 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 253
           AGKAM  +K+TI+EEM+EHIR+A+T K AWDTF +LF K+N  KLQLLEN+LLS+AQ +M
Sbjct: 62  AGKAMFALKTTIEEEMLEHIRDAKTPKEAWDTFVTLFSKRNDTKLQLLENELLSMAQRDM 121

Query: 254 II-------------------------NKMRRIVIHGFKPEYRNFIIAIQ---------- 313
            +                          +++RI++H  +PEYR F+ A+Q          
Sbjct: 122 AVAQYFHKVKSICREISELDPTAAIGEARIKRIIVHSLRPEYRGFVAAVQGWPTQPSLVE 181

Query: 314 ---------------------------------------------------GHYARDCRL 331
                                                              GH A++C  
Sbjct: 182 FENFLAGQEAMAKQMGGVSLKGEEEALYTSKSRGTFQRYTGNGSKKDGDKLGHMAKECWT 241

[Close]

BLAST of Moc08g18720 vs. NCBI nr
Match: XP_023761520.1 (uncharacterized protein LOC111909959 [Lactuca sativa])

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-43
Identity = 95/172 (55.23%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 132 MGGDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPPEDAI--ALKKWKV 191
           M GDLQV+GG+KKLN  NYK W TCM+ YLQ QDLWEV G SE TPPE+ +  AL+KWK+
Sbjct: 1   MMGDLQVIGGIKKLNNNNYKTWETCMKSYLQGQDLWEVVGGSETTPPEEDVNGALRKWKI 60

Query: 192 KAGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWE 251
           KAGKAM  +K+TI+EEM+EHIR+  T K AWDTF  LF KKN  +LQLLEN+LLSI+Q +
Sbjct: 61  KAGKAMFALKTTIEEEMLEHIRDENTLKEAWDTFVMLFSKKNDTRLQLLENELLSISQRD 120

Query: 252 MII-------------------------NKMRRIVIHGFKPEYRNFIIAIQG 277
           M I                          +M+RI+IHG +PEYR+F+ A+QG
Sbjct: 121 MTIAQYFHKVKSICREITELDLQSVIAEARMKRIIIHGLRPEYRSFVTAVQG 172

[Close]

BLAST of Moc08g18720 vs. ExPASy TrEMBL
Match: A0A5A7T1U9 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00800 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.1e-54
Identity = 136/278 (48.92%), Postives = 156/278 (56.12%), Query Frame = 0


Query: 131 MMGGDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPPEDAIALKKWKVK 190
           MM GDLQ V G+KKLNTQNYK WSTCM+ YLQ QDLW+V G +EV PPEDA  LKKW +K
Sbjct: 1   MMMGDLQ-VKGIKKLNTQNYKTWSTCMKSYLQGQDLWDVVGGTEVNPPEDAATLKKWNIK 60

Query: 191 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 250
           AGKA   IK+TIDEEM+EHI   ET K  WDTF SLF KKN A+LQ LEN+LLSI Q E 
Sbjct: 61  AGKATFAIKTTIDEEMLEHISIMETPKKVWDTFTSLFSKKNDARLQFLENELLSITQREK 120

Query: 251 IIN-------------------------KMRRIVIHGFKPEYRNFIIAIQ---------- 310
            IN                         +MRRI+IHG K EYR+FI AIQ          
Sbjct: 121 TINQYFTKVKFLCCEISELDPTSAISESRMRRIIIHGLKSEYRSFIAAIQGWAVQPSLID 180

Query: 311 ----------------------------------GHYARDCRLQKKPVESNAATSQMEST 340
                                             GHYAR+CR +KK  ESNA TSQ +S 
Sbjct: 181 LESMLASQEALAKQISEVTIKSNNGEALFSGQRRGHYARECRCKKKIAESNAVTSQAKSI 240

[Close]

BLAST of Moc08g18720 vs. ExPASy TrEMBL
Match: A0A6A3CH52 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00006888pilonHSYRG00009 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.4e-48
Identity = 131/341 (38.42%), Postives = 176/341 (51.61%), Query Frame = 0


Query: 93  QNQANITCFGGASEDGKQFEIVKLVVW---DIAVVCIHHYKMMGGDLQVVGGVKKLNTQN 152
           ++++ +T    A+++ K  ++V L+V    DI V C     +  GDLQVVGG+KKLN +N
Sbjct: 234 KDRSGLTALQVAAKE-KHNQMVNLLVTNGADILVRCSQSLAVKMGDLQVVGGIKKLNNKN 293

Query: 153 YKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAIA-LKKWKVKAGKAMITIKSTIDEEM 212
           Y  W+TCME YLQ QDLWEV G  EVT P  EDA   L+KWK+KAGKAM  +K+TI+EEM
Sbjct: 294 YNTWATCMESYLQGQDLWEVVGGGEVTQPATEDANGILRKWKIKAGKAMFALKTTIEEEM 353

Query: 213 VEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEMII-------------- 272
           +EHIR+A+T K AWDTF +LF K+N  KLQLLEN+LLS+AQ +M +              
Sbjct: 354 LEHIRDAKTPKEAWDTFVTLFSKRNDTKLQLLENELLSMAQRDMAVAQYFHKVKSICREI 413

Query: 273 -----------NKMRRIVIHGFKPEYRNFIIAIQ-------------------------- 331
                       +++RI++HG +PEYR F+ A+Q                          
Sbjct: 414 SELDPTADIGEARIKRIIVHGLRPEYRGFVAAVQGWPTQPSLVEFENLLAGQEAMAKQMG 473

[Close]

BLAST of Moc08g18720 vs. ExPASy TrEMBL
Match: A0A2N9IHF5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51365 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.3e-47
Identity = 124/298 (41.61%), Postives = 155/298 (52.01%), Query Frame = 0


Query: 134 GDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAI-ALKKWKVK 193
           GDLQVVGG+KKLN +NY  W+TC+E YLQ QDLWEV G SEVT P  EDA   L+KWK+K
Sbjct: 2   GDLQVVGGIKKLNNKNYNTWATCIESYLQGQDLWEVVGGSEVTQPAVEDASGTLRKWKIK 61

Query: 194 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 253
           AGKAM  +K+TI+EEM+EHIR+A+T K AWDTF +LF KKN  +LQLLEN+LLS+AQ +M
Sbjct: 62  AGKAMFALKTTIEEEMLEHIRDAKTPKEAWDTFVTLFSKKNDTRLQLLENELLSMAQRDM 121

Query: 254 II-------------------------NKMRRIVIHGFKPEYRNFIIAIQ---------- 313
            I                         ++++RI+IHG +PEYR F+ AIQ          
Sbjct: 122 TIAQYFHKVKAICREISQLDPTAPIGESRIKRIIIHGLRPEYRGFVTAIQGWPTQPSLVE 181

Query: 314 ------------------------------------------------------------ 331
                                                                       
Sbjct: 182 FENLLADQEAMAKQMGGVSLKGEEEALYTSKTRGTFKRNTGGVSKNRGNSRKFDGKCYNC 241

[Close]

BLAST of Moc08g18720 vs. ExPASy TrEMBL
Match: A0A2N9IFS6 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50936 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.3e-47
Identity = 124/298 (41.61%), Postives = 155/298 (52.01%), Query Frame = 0


Query: 134 GDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAI-ALKKWKVK 193
           GDLQVVGG+KKLN +NY  W+TC+E YLQ QDLWEV G SEVT P  EDA   L+KWK+K
Sbjct: 2   GDLQVVGGIKKLNNKNYNTWATCIESYLQGQDLWEVVGGSEVTQPAVEDASGTLRKWKIK 61

Query: 194 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 253
           AGKAM  +K+TI+EEM+EHIR+A+T K AWDTF +LF KKN  +LQLLEN+LLS+AQ +M
Sbjct: 62  AGKAMFALKTTIEEEMLEHIRDAKTPKEAWDTFVTLFSKKNDTRLQLLENELLSMAQRDM 121

Query: 254 II-------------------------NKMRRIVIHGFKPEYRNFIIAIQ---------- 313
            I                         ++++RI+IHG +PEYR F+ AIQ          
Sbjct: 122 TIAQYFHKVKAICREISQLDPTAPIGESRIKRIIIHGLRPEYRGFVTAIQGWPTQPSLVE 181

Query: 314 ------------------------------------------------------------ 331
                                                                       
Sbjct: 182 FENLLADQEAMAKQMGGVSLKGEEEALYTSKTRGTFKRNTGGVSKNRGNSRKFDGKCYNC 241

[Close]

BLAST of Moc08g18720 vs. ExPASy TrEMBL
Match: A0A6A2ZLP4 (Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110831pilonHSYRG00205 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-46
Identity = 121/286 (42.31%), Postives = 153/286 (53.50%), Query Frame = 0


Query: 134 GDLQVVGGVKKLNTQNYKIWSTCMELYLQEQDLWEVFGASEVTPP--EDAIA-LKKWKVK 193
           GDLQVVGG+KKLN +NY  W+TCME YLQ QDLWEV G  EVT P  EDA   L+KWK+K
Sbjct: 2   GDLQVVGGIKKLNNKNYNTWATCMESYLQGQDLWEVVGGGEVTQPATEDANGILRKWKIK 61

Query: 194 AGKAMITIKSTIDEEMVEHIRNAETQKVAWDTFASLFLKKNVAKLQLLENKLLSIAQWEM 253
           AGKAM  +K+TI+EEM+EHIR+A+T K AWDTF + F K+N  KLQLLEN+LLS+AQ +M
Sbjct: 62  AGKAMFALKTTIEEEMLEHIRDAKTPKEAWDTFVTHFSKRNDTKLQLLENELLSMAQRDM 121

Query: 254 II-------------------------NKMRRIVIHGFKPEYRNFIIAIQ---------- 313
            I                          +++RI++HG +PEYR F+ A+Q          
Sbjct: 122 AIAQYFHKVKSICREISELDPTAAIGEARIKRIIVHGLRPEYRGFVAAVQGWPTQPSLVE 181

Query: 314 ---------------------------------------------------GHYARDCRL 331
                                                              GH A+DC  
Sbjct: 182 FENLLAGQEAMAKQMGGVSLKGEEKALYTSKSRGTFQRYTGNGSKNDGDKMGHMAKDCWT 241

The following BLAST results are available for this feature:

BLAST of Moc08g18720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037350.1	6.5e-54	48.92	Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ97557.1 Integrase, cata...	[more]
KAE8726439.1	6.9e-48	38.42	hypothetical protein F3Y22_tig00006888pilonHSYRG00009 [Hibiscus syriacus]	[more]
KAE8692620.1	2.2e-46	42.31	tir-nbs resistance protein [Hibiscus syriacus]	[more]
KAE8673149.1	6.5e-46	41.61	hypothetical protein F3Y22_tig00111810pilonHSYRG00151 [Hibiscus syriacus]	[more]
XP_023761520.1	1.0e-43	55.23	uncharacterized protein LOC111909959 [Lactuca sativa]	[more]

BLAST of Moc08g18720 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g18720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1U9	3.1e-54	48.92	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6A3CH52	3.4e-48	38.42	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00006888pilon...	[more]
A0A2N9IHF5	8.3e-47	41.61	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51365 PE=4 SV=1	[more]
A0A2N9IFS6	8.3e-47	41.61	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50936 PE=3 SV=1	[more]
A0A6A2ZLP4	1.1e-46	42.31	Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110831pi...	[more]

BLAST of Moc08g18720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 187..245 e-value: 1.1E-6 score: 28.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..460
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 138..235
None	No IPR available	PANTHER	PTHR37610:SF42	SUBFAMILY NOT NAMED	coord: 138..235
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 145..169 e-value: 7.0E-10 score: 38.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g18720.1	Moc08g18720.1	mRNA