Homology
BLAST of Sed0016237 vs. NCBI nr
Match:
XP_022152148.1 (DEAD-box ATP-dependent RNA helicase 14 [Momordica charantia])
HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 629/769 (81.79%), Postives = 668/769 (86.87%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVA APLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVATAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQIQKPSS SYSNN +EN+DKYGRS+H A K EAAR+ETFHSHD SNG PNT
Sbjct: 61 IVSISSSVQIQKPSSGNSYSNNFNENSDKYGRSAHGASKHEAARAETFHSHDTSNGTPNT 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GGT LKG RP+DAGSGLSTEAYR+RHEITF GDNVPPP+ SFEATGFPPEILREV +A
Sbjct: 121 GHGGTLLKGHRPSDAGSGLSTEAYRQRHEITFSGDNVPPPYTSFEATGFPPEILREVQNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKR RNDP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRSRNDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ S CLYGGAPKGPQLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISLKCLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIV+E+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVREVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFRSG TP+LVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRSGRTPILVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRW--GSSG-SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGM KF RW GS G RGG DS SGGRGG+GSS FS AKP++GGGRGYDF SR
Sbjct: 541 SRSYGMTKFRRWGPGSDGRDGGRGGRTDSNSGGRGGQGSSFFSSAKPDRGGGRGYDFDSR 600
Query: 601 ERYDSG-NNRGCSP-------------------------PDRSAPERERSPVQSFHQAMM 660
ERYD G NNRG SP PDRSAP R+RSPV+SFH+AMM
Sbjct: 601 ERYDVGHNNRGRSPPRSVVGVGGDRTKSWNREHSPPSWSPDRSAPARDRSPVRSFHKAMM 660
Query: 661 QRSSRSS--------PPRGIDNGSKNGYGGWNQGRSRSRSPNRFNQVPAVQERSPVASFH 720
+RS RSS PPRGIDN SKNG G WNQGRSRSRSPNRFN+ PA +ERSPV+SFH
Sbjct: 661 ERSGRSSPPSNNQNVPPRGIDNASKNGIGSWNQGRSRSRSPNRFNRAPAARERSPVSSFH 720
Query: 721 KAMMEIENRRGANDDPEKDLRKSQA----------PREEEEEGMIPQHE 723
K+MME N D+PEKDLRK + P EE+EEGMIPQ E
Sbjct: 721 KSMMEKGN---FGDNPEKDLRKLPSDRMDGGRFSYPLEEDEEGMIPQEE 766
BLAST of Sed0016237 vs. NCBI nr
Match:
XP_038903376.1 (DEAD-box ATP-dependent RNA helicase 46 [Benincasa hispida] >XP_038903378.1 DEAD-box ATP-dependent RNA helicase 46 [Benincasa hispida] >XP_038903379.1 DEAD-box ATP-dependent RNA helicase 46 [Benincasa hispida] >XP_038903380.1 DEAD-box ATP-dependent RNA helicase 46 [Benincasa hispida])
HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 623/770 (80.91%), Postives = 660/770 (85.71%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQI+KPSS SYSNN +ENNDKYGR SH APKQE AR ETF SHD SNG P+T
Sbjct: 61 IVSISSSVQIEKPSSGHSYSNNLNENNDKYGRGSH-APKQEVARGETFQSHDSSNGTPST 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G G LKG RP+DAG+GLS E+YR+RHEITF GDNVPPPF SFEATGFPPEILREVH+A
Sbjct: 121 GHGRATLKGHRPSDAGNGLSAESYRQRHEITFSGDNVPPPFSSFEATGFPPEILREVHNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGMAKF RWGS RGG NDS GGRGGRG SSFS AKPE+GGGRGYDF SR
Sbjct: 541 SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNYGGRGGRGMSSFSSAKPERGGGRGYDFDSR 600
Query: 601 ERYDSGNNRGCS------------------------PPDRS--APERERSPVQSFHQAMM 660
ER D G NRG S PD+S P +RSPV+SFHQAMM
Sbjct: 601 ERNDFGYNRGRSRSPPRGVGGDRTKSWNREHSPHVWSPDKSGPGPAHDRSPVRSFHQAMM 660
Query: 661 QRSSRSSPPRGIDNGSKNGYGGWNQ----GRSRSRSPNRFNQVPAVQERSPVASFHKAMM 720
+RS + P RG DNGSKNG G WNQ RSRSRSPNRFN+ PAV+ERSPV SFHKAM+
Sbjct: 661 ERS--NIPHRGTDNGSKNGSGSWNQVRSRSRSRSRSPNRFNRAPAVRERSPVLSFHKAML 720
Query: 721 EIENRRGANDDPEKDLRKSQA---------------PREEEEEGMIPQHE 723
E N G +D+P+KD RKS + PREE EEGMIPQ E
Sbjct: 721 EKGNSGGTHDNPDKDSRKSPSDRMDGGGYEKSSRSYPREEYEEGMIPQDE 767
BLAST of Sed0016237 vs. NCBI nr
Match:
XP_011652287.1 (DEAD-box ATP-dependent RNA helicase 46 [Cucumis sativus])
HSP 1 Score: 1172.1 bits (3031), Expect = 0.0e+00
Identity = 620/774 (80.10%), Postives = 661/774 (85.40%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQIQKPSS SY+NN +ENNDKYGR SH APKQE AR ETF SHD SNG PNT
Sbjct: 61 IVSISSSVQIQKPSSGHSYNNNLNENNDKYGRGSH-APKQEVARGETFQSHDTSNGTPNT 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GG LKG RP+DAG+G+S E+YR+RHEITF GDNVP PF SFEATGFPPEILREVH+A
Sbjct: 121 GHGGAPLKGHRPSDAGNGISAESYRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKG QLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGMAKF RWGS RGG NDS SGGRGGRG SSFS +KPE+GGGRGYDF SR
Sbjct: 541 SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGRGMSSFSSSKPERGGGRGYDFDSR 600
Query: 601 ERYDSGNNRGCS-------------------------PPDRSAPERERSPVQSFHQAMMQ 660
ERYDSG NRG S PDRS P R+RSPV+SFHQAMM+
Sbjct: 601 ERYDSGYNRGRSRSPPRGGVGGDRTKSWNRDHSPPGWSPDRSGPARDRSPVRSFHQAMME 660
Query: 661 RSSRSSPPRGIDNGSKNGYGGWNQGR----SRSRSPNRFNQVPAVQERSPVASFHKAMME 720
RS + PPRG++N SKNG G WNQ R SRSRSPNRFN+ P +ERSPV SFHK M++
Sbjct: 661 RS--NIPPRGVENASKNGSGSWNQVRSRSCSRSRSPNRFNRAPPARERSPVLSFHKTMLD 720
Query: 721 IENR-RGANDDPE---KDLRKS----------------QAPREEEEEGMIPQHE 723
N G +D+P+ KD R+S PREE+EEGMIPQ E
Sbjct: 721 KGNSGGGTHDNPDNNNKDSRRSPRDRMDGGGYEKSSRTSYPREEDEEGMIPQDE 771
BLAST of Sed0016237 vs. NCBI nr
Match:
XP_022982654.1 (DEAD-box ATP-dependent RNA helicase 46-like [Cucurbita maxima] >XP_022982655.1 DEAD-box ATP-dependent RNA helicase 46-like [Cucurbita maxima])
HSP 1 Score: 1167.1 bits (3018), Expect = 0.0e+00
Identity = 618/761 (81.21%), Postives = 655/761 (86.07%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQ+QKPSS SY NN ENNDKYGR SH APK E AR ETF SHD NG+ +T
Sbjct: 61 IVSISSSVQVQKPSSGHSYGNNLSENNDKYGRVSHGAPKHEVARGETFQSHDTLNGISST 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GG LKG RP+DAGS LS E+YR+RHEITF GDNVPPPF SFEATGFPPEILREVH+A
Sbjct: 121 GHGGASLKGHRPSDAGSCLSAESYRQRHEITFSGDNVPPPFSSFEATGFPPEILREVHNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIR DP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRCDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGMAKF RWGS RGG NDS SGGRGG G SSFS AKPE+GGGRGYDF SR
Sbjct: 541 SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGLGMSSFSSAKPERGGGRGYDFDSR 600
Query: 601 ERYDSGNN--RGCSPP-------------DRSAP-ERERSPVQSFHQAMMQRSSRSSPPR 660
ERYDSG N R SPP D S P ERSPV+SFHQAMM+RS + PPR
Sbjct: 601 ERYDSGYNCGRSRSPPRGVGGDRTKSWNCDHSPPVSHERSPVRSFHQAMMERS--NIPPR 660
Query: 661 GIDNGSKNGYGGWNQG----RSRSRSPNRFNQVPAVQERSPVASFHKAMMEIENRRGAND 720
G +N SKNG G WNQG RSRSRSPNRFN+ PAV+ERSPV SFHKAM+E N G +
Sbjct: 661 GNENASKNGSGSWNQGRSRSRSRSRSPNRFNRAPAVRERSPVLSFHKAMLEKGNSGGTHV 720
Query: 721 DPEKDLRKSQA----------------PREEEEEGMIPQHE 723
+P+K RKS + P+EE EEGMIPQ +
Sbjct: 721 NPDKVSRKSPSDRTDGGEHEKRSRPSHPQEEVEEGMIPQDD 759
BLAST of Sed0016237 vs. NCBI nr
Match:
XP_008443543.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 46 [Cucumis melo] >TYK00823.1 DEAD-box ATP-dependent RNA helicase 46 [Cucumis melo var. makuwa])
HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 615/774 (79.46%), Postives = 660/774 (85.27%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGM--- 120
IVS+SSSVQIQKPSS SY+NN +ENNDKYGR SH APKQE AR ETF SHD SNG+
Sbjct: 61 IVSISSSVQIQKPSSGHSYNNNLNENNDKYGRGSH-APKQEVARGETFQSHDTSNGIHGA 120
Query: 121 PNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
P+TG GG LKG +P+DAGSGLS ++YR+RHEITF GDNVP PF SFE TGFPPEILREV
Sbjct: 121 PSTGHGGAPLKGHKPSDAGSGLSADSYRQRHEITFSGDNVPAPFSSFEVTGFPPEILREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
H+AGFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTV
Sbjct: 181 HNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTV 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIA
Sbjct: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
SDLLVNPIQVNIGNVDELVANKSITQHIE LAP+EKHRRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEPLAPLEKHRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
KMCDQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRV
Sbjct: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRV 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
V+NYDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELR
Sbjct: 481 VINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELR 540
Query: 541 DMASRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDF 600
DMASRSYGMAKF RWGS RGG NDS SGGRGGRG SSFS +KPE+GGGRGYDF
Sbjct: 541 DMASRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGRGMSSFSSSKPERGGGRGYDF 600
Query: 601 QSRERYDSGNNRGCS-------------------------PPDRSAPERERSPVQSFHQA 660
SR+RYDSG NRG S PDRSAP R+RSPV+SFHQ+
Sbjct: 601 DSRDRYDSGYNRGRSRSPPRGGAGGDRTKSWNRDHSPPGWSPDRSAPARDRSPVRSFHQS 660
Query: 661 MMQRSSRSSPPRGIDNGSKNGYGGWNQ----GRSRSRSPNRFNQVPAVQERSPVASFHKA 720
MM+RS + PPRGI+N SKNG G WNQ RSRSRSPNRFN+ P +ERSP+ SFHK
Sbjct: 661 MMERS--NIPPRGIENASKNGSGSWNQVRSRSRSRSRSPNRFNRAPPARERSPILSFHKT 720
Query: 721 MMEIENRRGANDD-PEKDLR----------------KSQAPREEEEEGMIPQHE 723
+++ N G +D+ KD R +S PREE+EEGMIPQ E
Sbjct: 721 VLDKGNSGGTHDNLDNKDSRRSPRDRTDGGGYEKSSRSSYPREEDEEGMIPQDE 771
BLAST of Sed0016237 vs. ExPASy Swiss-Prot
Match:
Q9LYJ9 (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2)
HSP 1 Score: 860.5 bits (2222), Expect = 1.3e-248
Identity = 465/652 (71.32%), Postives = 521/652 (79.91%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATA+++ RYAPEDP LPKPW+GLVD +TGYLYFWNPETNVTQYERP ++AP +
Sbjct: 1 MAATASAI----RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLA 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-------QEAARSETFHSHDP 120
+ VSSSVQ + SSS N+ + +DKYGR S + PK EA R+ S+D
Sbjct: 61 AIPVSSSVQTNQQSSS---GFNSGKEDDKYGRGS-DGPKSDSGSRFNEAGRTGPISSNDA 120
Query: 121 SNGMPNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEI 180
++G+ N GG+ +G + AG+ LS EAY ++HEIT G VPPP MSFEATG P E+
Sbjct: 121 ASGLGNASSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNEL 180
Query: 181 LREVHSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRL 240
LREV+SAGFSAP+PIQAQSWPIA+Q+RDIVAIAKTGSGKTLGYLIPGF+ L+RI ND R+
Sbjct: 181 LREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM 240
Query: 241 GPTVLVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPG 300
GPT+LVLSPTRELATQIQ EA+KFGKSSK SC CLYGGAPKGPQL++++RGVDIVVATPG
Sbjct: 241 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPG 300
Query: 301 RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEV 360
RLNDILEM+RISLHQVSYLVLDEADRMLDMGFEPQIRKIV E+P KRQTLMYTATWPKEV
Sbjct: 301 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 360
Query: 361 RKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIF 420
RKIA+DLLVNP QVNIGNVDELVANKSITQ IE LAPMEKH RLEQILRSQEPGSKIIIF
Sbjct: 361 RKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIF 420
Query: 421 CSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVK 480
CSTK+MCDQLARNLTR FGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVK
Sbjct: 421 CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVK 480
Query: 481 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVP 540
DIRVVVNYDFP GVEDYVHRIGRTGRAGATG+AYTFFG+QDAKHASDLIKILEGANQ+VP
Sbjct: 481 DIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVP 540
Query: 541 PELRDMASR-SYGMAKFSRWG---SSGSNSRGGFNDSGSGGRGGRGSSS---FSYAKPEQ 600
P++R+MA+R GM KF RWG S G RGG+ DSG GGRG G S Y
Sbjct: 541 PQVREMATRGGGGMNKFRRWGTPSSGGGGGRGGYGDSGYGGRGESGYGSRGDSGYGGRGD 600
Query: 601 GGGRGYDFQSRERYDS---GNNRGCSPPD-RSAPERERSPVQSFHQAMMQRS 635
GGRG SR+ S G R SP R P SP +SFH+AMM ++
Sbjct: 601 SGGRGSWAPSRDSSGSSGWGRERSRSPERFRGGPPSTSSPPRSFHEAMMMKN 644
BLAST of Sed0016237 vs. ExPASy Swiss-Prot
Match:
Q8H136 (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2)
HSP 1 Score: 837.4 bits (2162), Expect = 1.2e-241
Identity = 457/638 (71.63%), Postives = 509/638 (79.78%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLN-S 60
MAATA + V RYAPED TLPKPW+GL+D +TGYLYFWNPETNVTQYE+P + P S
Sbjct: 1 MAATAAASVV--RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFS 60
Query: 61 SIVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-QEAARSETFHSHDPSNGMP 120
VSVSSSVQ+Q+ + +Y+ D+ DKY R S + E RS +S+ +NG+
Sbjct: 61 PAVSVSSSVQVQQ---TDAYAPPKDD--DKYSRGSERVSRFSEGGRSGPPYSNGAANGVG 120
Query: 121 NTGQGGTQLKGQRPTDA-GSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
++ G + P+ A S LS EAY +RHEIT G VPPP MSFEATGFPPE+LREV
Sbjct: 121 DSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
SAGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIPGF+ L+RIRND R+GPT+
Sbjct: 181 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQ+EAVKFG+SS+ SC CLYGGAPKGPQLRDL+RG DIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISL Q+SYLVLDEADRMLDMGFEPQIRKIVKEIP KRQTLMYTATWPK VRKIA
Sbjct: 301 ILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
+DLLVNP QVNIGNVDELVANKSITQHIE +APMEK RRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 ADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
+MCDQL RNLTRQFGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVKDIR
Sbjct: 421 RMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
VVNYDFP GVEDYVHRIGRTGRAGATG A+TFFG+QD+KHASDLIKILEGANQRVPP++R
Sbjct: 481 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 540
Query: 541 DMASR-SYGMAKFSRWG-SSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQ 600
+MA+R GM KFSRWG SG RGG DSG GGRG S+A + G+ +
Sbjct: 541 EMATRGGGGMNKFSRWGPPSGGRGRGG--DSGYGGRG-------SFASRDSRSSNGWG-R 600
Query: 601 SRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQR 634
RER S +PP P SP +SFH+ MM +
Sbjct: 601 ERERSRSPERFNRAPP----PSSTGSPPRSFHETMMMK 617
BLAST of Sed0016237 vs. ExPASy Swiss-Prot
Match:
P46942 (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 2.9e-227
Identity = 429/631 (67.99%), Postives = 487/631 (77.18%), Query Frame = 0
Query: 3 ATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPV-----AAAPL 62
A T+ S GP YAPEDPTLPKPW+GLVDG TG++YFWNPETN TQYERPV +AP
Sbjct: 2 AVVTASSAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPVPSSHAVSAPA 61
Query: 63 NSSIVSVSSSVQIQKPSSSQSY---SNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPS 122
+ S V VSSSV +KPS Q Y +N +N+K RSS S+ FH
Sbjct: 62 HKSSVFVSSSV--EKPSQGQRYDADGGHNRGSNNKIARSS----------SDRFH----- 121
Query: 123 NGMPNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEIL 182
G + +G GS +S E+Y +R+EI+ G +VP P SFEATGFP EI+
Sbjct: 122 -------DGTSVHEGYGSLGVGSDISQESYCRRNEISVTGGDVPAPLTSFEATGFPSEIV 181
Query: 183 REVHSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLG 242
RE+H AGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYL+P FI L++ R +P+LG
Sbjct: 182 REMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPAFIHLQQRRKNPQLG 241
Query: 243 PTVLVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGR 302
PT+LVLSPTRELATQIQ EAVKFGKSS+ SC CLYGGAPKGPQLR+L RGVDIVVATPGR
Sbjct: 242 PTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGR 301
Query: 303 LNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVR 362
LNDILEMRR+SL QVSYLVLDEADRMLDMGFEPQIRKIVKE+P +RQTLMYTATWPK VR
Sbjct: 302 LNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWPKGVR 361
Query: 363 KIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFC 422
KIA+DLLVN +QVNIGNVDELVANKSITQHIE + PMEK RR+EQILRS+EPGSKIIIFC
Sbjct: 362 KIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPGSKIIIFC 421
Query: 423 STKKMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKD 482
STKKMCDQL+RNLTR FGAAAIHGDKSQGERD VL QFR+G +PVLVATDVAARGLD+KD
Sbjct: 422 STKKMCDQLSRNLTRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKD 481
Query: 483 IRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPP 542
IRVV+NYDFPTG+EDYVHRIGRTGRAGA+G+AYTFF +QD+KHA DL+K+LEGANQ VP
Sbjct: 482 IRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPT 541
Query: 543 ELRDMASRSYGMAKF-SRWGSSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYD 602
ELRDMASR GM + + WG SG GGRGGRG ++ + + GG GYD
Sbjct: 542 ELRDMASRGGGMGRARNHWG------------SGPGGRGGRG-GPYNSSYVGRNGGHGYD 592
Query: 603 FQSR--ERYDSGNNRGCSPPDRSAPERERSP 623
SR +RY G +P RS R RSP
Sbjct: 602 RGSRDSDRYGHGTYNADAPRKRS---RSRSP 592
BLAST of Sed0016237 vs. ExPASy Swiss-Prot
Match:
Q5VQL1 (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1)
HSP 1 Score: 755.7 bits (1950), Expect = 4.6e-217
Identity = 429/713 (60.17%), Postives = 494/713 (69.28%), Query Frame = 0
Query: 2 AATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSSI 61
AA A + + GPRYAP DPTLPKPWRGL+DG TGYLYFWNPET QY+RP A P +
Sbjct: 4 AAAAAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAPPPSSPPA 63
Query: 62 VSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSH---------D 121
+ P+ SQ+ + + R+ + AP + AR++ + H
Sbjct: 64 QQPPERPRNSDPAESQAQAGAS--------RTQNAAPADDRARNDHLNDHFERRTEAAGS 123
Query: 122 PSNGMPNTGQGGTQLKGQRPTDA---------------GSGLSTEAYRKRHEITFVGDNV 181
+ +P T Q +P A G S EAYR +HEIT VG+
Sbjct: 124 HAQNVPFTEQNTRSNPSSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEA 183
Query: 182 PPPFMSFEATGFPPEILREVHSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYL 241
P PFM+F++TGFPPEILREV AGFSAPTPIQAQSWPIA+++RDIVA+AKTGSGKTLGYL
Sbjct: 184 PAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYL 243
Query: 242 IPGFIQLKRIRNDPRLGPTVLVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQ 301
IPGFI LKR++++ R GPTVLVLSPTRELATQIQDEA KFG+SS+ S VCLYGGAPKGPQ
Sbjct: 244 IPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQ 303
Query: 302 LRDLDRGVDIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIP 361
LRDL+RG DIVVATPGRLNDILEMRR+SLHQVSYLVLDEADRMLDMGFEPQIRKIVK++
Sbjct: 304 LRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ 363
Query: 362 AKRQTLMYTATWPKEVRKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRL 421
KRQTLM+TATWPKEVRKIASDLL NP+QVNIGN D+LVANKSITQ+++ + P EK RRL
Sbjct: 364 PKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRL 423
Query: 422 EQILRSQEPGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGST 481
+QILRSQEPGSKIIIFCSTK+MCDQLARNL RQ+GA+AIHGDKSQ ERD VL +FRSG
Sbjct: 424 DQILRSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRC 483
Query: 482 PVLVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKH 541
P+LVATDVAARGLD+KDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFF +QD+K+
Sbjct: 484 PILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKY 543
Query: 542 ASDLIKILEGANQRVPPELRDMASRSYGMAKFSRWGS-----------SGSNSRGGFN-D 601
ASDL+KILEGANQ V +LRDM SR + RW S SG SR N +
Sbjct: 544 ASDLVKILEGANQSVSQQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYN 603
Query: 602 SGSGGRGGRGSSSFSYAKPEQGGGRGYD---FQSRERYDSGNNRGCSPPDRSAPERERSP 661
SG G + G GSS S G + D FQ+ S NN+ P A P
Sbjct: 604 SGYGSQSGNGSSFHSSFHNSNSGNQFGDTSGFQTSFHNSSSNNQTSDNPSFHASSNNDQP 663
Query: 662 VQ--SFHQAMMQRSSRSSPPRGIDNGSKNGYGGWNQGRSRSRSP--NRFNQVP 672
SFH S RG D N G R RSRSP NR ++ P
Sbjct: 664 GDGLSFHARFYSSS------RGSDQSRTNNAG----FRDRSRSPPSNRNHEDP 698
BLAST of Sed0016237 vs. ExPASy Swiss-Prot
Match:
Q5JKF2 (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2)
HSP 1 Score: 731.1 bits (1886), Expect = 1.2e-209
Identity = 424/735 (57.69%), Postives = 505/735 (68.71%), Query Frame = 0
Query: 4 TATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSSIVS 63
+A + PRYAP+DP+LPKPWRGLVDG TGYLY+WNPETN+TQYE+P+
Sbjct: 2 SAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPED------- 61
Query: 64 VSSSVQIQKP---SSSQSYSNNNDENNDKYGRSSHEAPKQEAARS---ETFHSHDPSNGM 123
Q+ P S D + D+ RS P + R + HD
Sbjct: 62 -----QLPPPPPLPPPPPRSGRGDRDRDRRDRSRSRTPPRRDHRDRDRDRDRRHDDHRSA 121
Query: 124 PNTGQGGTQLKGQRPTDAGSGL-----STEAYRKRHEITFVGDNVPPPFMSFEATGFPPE 183
P+ P A + + STEAYR RHEIT VGDNVP P SFE GFPPE
Sbjct: 122 PS---------HHHPLPAAAAIAADDPSTEAYRHRHEITVVGDNVPAPITSFETGGFPPE 181
Query: 184 ILREVHSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPR 243
IL+E+ AGFS+PTPIQAQSWPIA+Q +D+VAIAKTGSGKTLGYL+PGF+ +KR++N+PR
Sbjct: 182 ILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR 241
Query: 244 LGPTVLVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATP 303
GPTVLVL+PTRELATQI +EAVKFG+SS+ S CLYGGAPKGPQLRDLDRGVD+VVATP
Sbjct: 242 SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATP 301
Query: 304 GRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKE 363
GRLNDILEMRRISL QVSYLVLDEADRMLDMGFEPQIRKIVKEIP +RQTLMYTATWPKE
Sbjct: 302 GRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKE 361
Query: 364 VRKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIII 423
VR+IA DLLV+P+QV IG+VDELVAN +ITQ++E + P EK RRLEQILRSQ+ GSK++I
Sbjct: 362 VRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLI 421
Query: 424 FCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDV 483
FC+TK+MCDQLAR LTRQFGA+AIHGDKSQ ER++VL FRSG +P+LVATDVAARGLD+
Sbjct: 422 FCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDI 481
Query: 484 KDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRV 543
KDIRVV+NYDFPTG+EDYVHRIGRTGRAGATGVAYTFF +QD+K+A+DLIKILEGANQRV
Sbjct: 482 KDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRV 541
Query: 544 PPELRDMASR-SYGMAKFSRWGSSGSNSRGGFN---DSGSGGRGGRGSSSFSYAKPEQGG 603
P +L DMASR G K +RW + + RGG + DS GGR G SS
Sbjct: 542 PRDLADMASRGGRGGRKRNRWAT--RSDRGGSHSELDSRYGGRDGLSGSSGRLDSSRSSR 601
Query: 604 GRGYDFQSRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQRSSRSSPPRGIDNGSK 663
Y R R SG R S + RSP +S +R SRS + S+
Sbjct: 602 RHDYGDDGRSR-RSGRGRSRSRSRSDSDRYSRSPKRS------RRHSRSRTRSRSRSRSR 661
Query: 664 NGYGGWNQGRSRSRSPNRFNQVPAVQERSPVASFHKAMMEI---ENRRGANDDPEKDLRK 719
+ RSRSRSP + ERS S A+ + E +R DP ++
Sbjct: 662 SYTRNRRASRSRSRSPGASRR----HERSATGS-GSALPDSGHGERKRTPEADPSRNHTN 701
BLAST of Sed0016237 vs. ExPASy TrEMBL
Match:
A0A6J1DE30 (DEAD-box ATP-dependent RNA helicase 14 OS=Momordica charantia OX=3673 GN=LOC111019936 PE=3 SV=1)
HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 629/769 (81.79%), Postives = 668/769 (86.87%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVA APLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVATAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQIQKPSS SYSNN +EN+DKYGRS+H A K EAAR+ETFHSHD SNG PNT
Sbjct: 61 IVSISSSVQIQKPSSGNSYSNNFNENSDKYGRSAHGASKHEAARAETFHSHDTSNGTPNT 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GGT LKG RP+DAGSGLSTEAYR+RHEITF GDNVPPP+ SFEATGFPPEILREV +A
Sbjct: 121 GHGGTLLKGHRPSDAGSGLSTEAYRQRHEITFSGDNVPPPYTSFEATGFPPEILREVQNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKR RNDP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRSRNDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ S CLYGGAPKGPQLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISLKCLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIV+E+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVREVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFRSG TP+LVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRSGRTPILVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRW--GSSG-SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGM KF RW GS G RGG DS SGGRGG+GSS FS AKP++GGGRGYDF SR
Sbjct: 541 SRSYGMTKFRRWGPGSDGRDGGRGGRTDSNSGGRGGQGSSFFSSAKPDRGGGRGYDFDSR 600
Query: 601 ERYDSG-NNRGCSP-------------------------PDRSAPERERSPVQSFHQAMM 660
ERYD G NNRG SP PDRSAP R+RSPV+SFH+AMM
Sbjct: 601 ERYDVGHNNRGRSPPRSVVGVGGDRTKSWNREHSPPSWSPDRSAPARDRSPVRSFHKAMM 660
Query: 661 QRSSRSS--------PPRGIDNGSKNGYGGWNQGRSRSRSPNRFNQVPAVQERSPVASFH 720
+RS RSS PPRGIDN SKNG G WNQGRSRSRSPNRFN+ PA +ERSPV+SFH
Sbjct: 661 ERSGRSSPPSNNQNVPPRGIDNASKNGIGSWNQGRSRSRSPNRFNRAPAARERSPVSSFH 720
Query: 721 KAMMEIENRRGANDDPEKDLRKSQA----------PREEEEEGMIPQHE 723
K+MME N D+PEKDLRK + P EE+EEGMIPQ E
Sbjct: 721 KSMMEKGN---FGDNPEKDLRKLPSDRMDGGRFSYPLEEDEEGMIPQEE 766
BLAST of Sed0016237 vs. ExPASy TrEMBL
Match:
A0A0A0LG68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838660 PE=4 SV=1)
HSP 1 Score: 1172.1 bits (3031), Expect = 0.0e+00
Identity = 620/774 (80.10%), Postives = 661/774 (85.40%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 63 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 122
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQIQKPSS SY+NN +ENNDKYGR SH APKQE AR ETF SHD SNG PNT
Sbjct: 123 IVSISSSVQIQKPSSGHSYNNNLNENNDKYGRGSH-APKQEVARGETFQSHDTSNGTPNT 182
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GG LKG RP+DAG+G+S E+YR+RHEITF GDNVP PF SFEATGFPPEILREVH+A
Sbjct: 183 GHGGAPLKGHRPSDAGNGISAESYRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNA 242
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTVLVL
Sbjct: 243 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTVLVL 302
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKG QLRD+DRGVDIVVATPGRLNDILE
Sbjct: 303 SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDILE 362
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 363 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL 422
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 423 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 482
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRVV+N
Sbjct: 483 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 542
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 543 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 602
Query: 541 SRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGMAKF RWGS RGG NDS SGGRGGRG SSFS +KPE+GGGRGYDF SR
Sbjct: 603 SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGRGMSSFSSSKPERGGGRGYDFDSR 662
Query: 601 ERYDSGNNRGCS-------------------------PPDRSAPERERSPVQSFHQAMMQ 660
ERYDSG NRG S PDRS P R+RSPV+SFHQAMM+
Sbjct: 663 ERYDSGYNRGRSRSPPRGGVGGDRTKSWNRDHSPPGWSPDRSGPARDRSPVRSFHQAMME 722
Query: 661 RSSRSSPPRGIDNGSKNGYGGWNQGR----SRSRSPNRFNQVPAVQERSPVASFHKAMME 720
RS + PPRG++N SKNG G WNQ R SRSRSPNRFN+ P +ERSPV SFHK M++
Sbjct: 723 RS--NIPPRGVENASKNGSGSWNQVRSRSCSRSRSPNRFNRAPPARERSPVLSFHKTMLD 782
Query: 721 IENR-RGANDDPE---KDLRKS----------------QAPREEEEEGMIPQHE 723
N G +D+P+ KD R+S PREE+EEGMIPQ E
Sbjct: 783 KGNSGGGTHDNPDNNNKDSRRSPRDRMDGGGYEKSSRTSYPREEDEEGMIPQDE 833
BLAST of Sed0016237 vs. ExPASy TrEMBL
Match:
A0A6J1J570 (DEAD-box ATP-dependent RNA helicase 46-like OS=Cucurbita maxima OX=3661 GN=LOC111481466 PE=3 SV=1)
HSP 1 Score: 1167.1 bits (3018), Expect = 0.0e+00
Identity = 618/761 (81.21%), Postives = 655/761 (86.07%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGMPNT 120
IVS+SSSVQ+QKPSS SY NN ENNDKYGR SH APK E AR ETF SHD NG+ +T
Sbjct: 61 IVSISSSVQVQKPSSGHSYGNNLSENNDKYGRVSHGAPKHEVARGETFQSHDTLNGISST 120
Query: 121 GQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREVHSA 180
G GG LKG RP+DAGS LS E+YR+RHEITF GDNVPPPF SFEATGFPPEILREVH+A
Sbjct: 121 GHGGASLKGHRPSDAGSCLSAESYRQRHEITFSGDNVPPPFSSFEATGFPPEILREVHNA 180
Query: 181 GFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTVLVL 240
GFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIR DP+LGPTVLVL
Sbjct: 181 GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRCDPKLGPTVLVL 240
Query: 241 SPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILE 300
SPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLNDILE
Sbjct: 241 SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE 300
Query: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIASDL 360
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIASDL
Sbjct: 301 MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL 360
Query: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMC 420
LVNPIQVNIGNVDELVANKSITQHIEALAP+EKHRRLEQILRSQEPGSK+IIFCSTKKMC
Sbjct: 361 LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC 420
Query: 421 DQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRVVVN 480
DQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRVV+N
Sbjct: 421 DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 480
Query: 481 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELRDMA 540
YDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELRDMA
Sbjct: 481 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA 540
Query: 541 SRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQSR 600
SRSYGMAKF RWGS RGG NDS SGGRGG G SSFS AKPE+GGGRGYDF SR
Sbjct: 541 SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGLGMSSFSSAKPERGGGRGYDFDSR 600
Query: 601 ERYDSGNN--RGCSPP-------------DRSAP-ERERSPVQSFHQAMMQRSSRSSPPR 660
ERYDSG N R SPP D S P ERSPV+SFHQAMM+RS + PPR
Sbjct: 601 ERYDSGYNCGRSRSPPRGVGGDRTKSWNCDHSPPVSHERSPVRSFHQAMMERS--NIPPR 660
Query: 661 GIDNGSKNGYGGWNQG----RSRSRSPNRFNQVPAVQERSPVASFHKAMMEIENRRGAND 720
G +N SKNG G WNQG RSRSRSPNRFN+ PAV+ERSPV SFHKAM+E N G +
Sbjct: 661 GNENASKNGSGSWNQGRSRSRSRSRSPNRFNRAPAVRERSPVLSFHKAMLEKGNSGGTHV 720
Query: 721 DPEKDLRKSQA----------------PREEEEEGMIPQHE 723
+P+K RKS + P+EE EEGMIPQ +
Sbjct: 721 NPDKVSRKSPSDRTDGGEHEKRSRPSHPQEEVEEGMIPQDD 759
BLAST of Sed0016237 vs. ExPASy TrEMBL
Match:
A0A5D3BM24 (DEAD-box ATP-dependent RNA helicase 46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00240 PE=3 SV=1)
HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 615/774 (79.46%), Postives = 660/774 (85.27%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGM--- 120
IVS+SSSVQIQKPSS SY+NN +ENNDKYGR SH APKQE AR ETF SHD SNG+
Sbjct: 61 IVSISSSVQIQKPSSGHSYNNNLNENNDKYGRGSH-APKQEVARGETFQSHDTSNGIHGA 120
Query: 121 PNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
P+TG GG LKG +P+DAGSGLS ++YR+RHEITF GDNVP PF SFE TGFPPEILREV
Sbjct: 121 PSTGHGGAPLKGHKPSDAGSGLSADSYRQRHEITFSGDNVPAPFSSFEVTGFPPEILREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
H+AGFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTV
Sbjct: 181 HNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTV 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIA
Sbjct: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
SDLLVNPIQVNIGNVDELVANKSITQHIE LAP+EKHRRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEPLAPLEKHRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
KMCDQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRV
Sbjct: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRV 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
V+NYDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELR
Sbjct: 481 VINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELR 540
Query: 541 DMASRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDF 600
DMASRSYGMAKF RWGS RGG NDS SGGRGGRG SSFS +KPE+GGGRGYDF
Sbjct: 541 DMASRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGRGMSSFSSSKPERGGGRGYDF 600
Query: 601 QSRERYDSGNNRGCS-------------------------PPDRSAPERERSPVQSFHQA 660
SR+RYDSG NRG S PDRSAP R+RSPV+SFHQ+
Sbjct: 601 DSRDRYDSGYNRGRSRSPPRGGAGGDRTKSWNRDHSPPGWSPDRSAPARDRSPVRSFHQS 660
Query: 661 MMQRSSRSSPPRGIDNGSKNGYGGWNQ----GRSRSRSPNRFNQVPAVQERSPVASFHKA 720
MM+RS + PPRGI+N SKNG G WNQ RSRSRSPNRFN+ P +ERSP+ SFHK
Sbjct: 661 MMERS--NIPPRGIENASKNGSGSWNQVRSRSRSRSRSPNRFNRAPPARERSPILSFHKT 720
Query: 721 MMEIENRRGANDD-PEKDLR----------------KSQAPREEEEEGMIPQHE 723
+++ N G +D+ KD R +S PREE+EEGMIPQ E
Sbjct: 721 VLDKGNSGGTHDNLDNKDSRRSPRDRTDGGGYEKSSRSSYPREEDEEGMIPQDE 771
BLAST of Sed0016237 vs. ExPASy TrEMBL
Match:
A0A1S3B7U1 (DEAD-box ATP-dependent RNA helicase 46 OS=Cucumis melo OX=3656 GN=LOC103487108 PE=3 SV=1)
HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 615/774 (79.46%), Postives = 660/774 (85.27%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATAT+VSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
Sbjct: 1 MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPKQEAARSETFHSHDPSNGM--- 120
IVS+SSSVQIQKPSS SY+NN +ENNDKYGR SH APKQE AR ETF SHD SNG+
Sbjct: 61 IVSISSSVQIQKPSSGHSYNNNLNENNDKYGRGSH-APKQEVARGETFQSHDTSNGIHGA 120
Query: 121 PNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
P+TG GG LKG +P+DAGSGLS ++YR+RHEITF GDNVP PF SFE TGFPPEILREV
Sbjct: 121 PSTGHGGAPLKGHKPSDAGSGLSADSYRQRHEITFSGDNVPAPFSSFEVTGFPPEILREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
H+AGFSAPTPIQAQSWPIA+QSRDIVAIAKTGSGKTLGYLIPGFI LKRIRNDP+LGPTV
Sbjct: 181 HNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTV 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQDEAVKFGKSS+ SC CLYGGAPKGPQLRD+DRGVDIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKE+PA+RQTLMYTATWPKEVRKIA
Sbjct: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
SDLLVNPIQVNIGNVDELVANKSITQHIE LAP+EKHRRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEPLAPLEKHRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
KMCDQLARNLTRQFGAAAIHGDKSQGERD VLGQFR+G TPVLVATDVAARGLD+KDIRV
Sbjct: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRV 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
V+NYDFP+GVEDYVHRIGRTGRAGATG+AYTFFGEQDAK+ASDLIKILEGANQRVPPELR
Sbjct: 481 VINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELR 540
Query: 541 DMASRSYGMAKFSRWGSSG---SNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDF 600
DMASRSYGMAKF RWGS RGG NDS SGGRGGRG SSFS +KPE+GGGRGYDF
Sbjct: 541 DMASRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGRGMSSFSSSKPERGGGRGYDF 600
Query: 601 QSRERYDSGNNRGCS-------------------------PPDRSAPERERSPVQSFHQA 660
SR+RYDSG NRG S PDRSAP R+RSPV+SFHQ+
Sbjct: 601 DSRDRYDSGYNRGRSRSPPRGGAGGDRTKSWNRDHSPPGWSPDRSAPARDRSPVRSFHQS 660
Query: 661 MMQRSSRSSPPRGIDNGSKNGYGGWNQ----GRSRSRSPNRFNQVPAVQERSPVASFHKA 720
MM+RS + PPRGI+N SKNG G WNQ RSRSRSPNRFN+ P +ERSP+ SFHK
Sbjct: 661 MMERS--NIPPRGIENASKNGSGSWNQVRSRSRSRSRSPNRFNRAPPARERSPILSFHKT 720
Query: 721 MMEIENRRGANDD-PEKDLR----------------KSQAPREEEEEGMIPQHE 723
+++ N G +D+ KD R +S PREE+EEGMIPQ E
Sbjct: 721 VLDKGNSGGTHDNLDNKDSRRSPRDRTDGGGYEKSSRSSYPREEDEEGMIPQDE 771
BLAST of Sed0016237 vs. TAIR 10
Match:
AT5G14610.2 (DEAD box RNA helicase family protein )
HSP 1 Score: 860.5 bits (2222), Expect = 9.5e-250
Identity = 465/652 (71.32%), Postives = 521/652 (79.91%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS 60
MAATA+++ RYAPEDP LPKPW+GLVD +TGYLYFWNPETNVTQYERP ++AP +
Sbjct: 1 MAATASAI----RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLA 60
Query: 61 IVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-------QEAARSETFHSHDP 120
+ VSSSVQ + SSS N+ + +DKYGR S + PK EA R+ S+D
Sbjct: 61 AIPVSSSVQTNQQSSS---GFNSGKEDDKYGRGS-DGPKSDSGSRFNEAGRTGPISSNDA 120
Query: 121 SNGMPNTGQGGTQLKGQRPTDAGSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEI 180
++G+ N GG+ +G + AG+ LS EAY ++HEIT G VPPP MSFEATG P E+
Sbjct: 121 ASGLGNASSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNEL 180
Query: 181 LREVHSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRL 240
LREV+SAGFSAP+PIQAQSWPIA+Q+RDIVAIAKTGSGKTLGYLIPGF+ L+RI ND R+
Sbjct: 181 LREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM 240
Query: 241 GPTVLVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPG 300
GPT+LVLSPTRELATQIQ EA+KFGKSSK SC CLYGGAPKGPQL++++RGVDIVVATPG
Sbjct: 241 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPG 300
Query: 301 RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEV 360
RLNDILEM+RISLHQVSYLVLDEADRMLDMGFEPQIRKIV E+P KRQTLMYTATWPKEV
Sbjct: 301 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 360
Query: 361 RKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIF 420
RKIA+DLLVNP QVNIGNVDELVANKSITQ IE LAPMEKH RLEQILRSQEPGSKIIIF
Sbjct: 361 RKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIF 420
Query: 421 CSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVK 480
CSTK+MCDQLARNLTR FGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVK
Sbjct: 421 CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVK 480
Query: 481 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVP 540
DIRVVVNYDFP GVEDYVHRIGRTGRAGATG+AYTFFG+QDAKHASDLIKILEGANQ+VP
Sbjct: 481 DIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVP 540
Query: 541 PELRDMASR-SYGMAKFSRWG---SSGSNSRGGFNDSGSGGRGGRGSSS---FSYAKPEQ 600
P++R+MA+R GM KF RWG S G RGG+ DSG GGRG G S Y
Sbjct: 541 PQVREMATRGGGGMNKFRRWGTPSSGGGGGRGGYGDSGYGGRGESGYGSRGDSGYGGRGD 600
Query: 601 GGGRGYDFQSRERYDS---GNNRGCSPPD-RSAPERERSPVQSFHQAMMQRS 635
GGRG SR+ S G R SP R P SP +SFH+AMM ++
Sbjct: 601 SGGRGSWAPSRDSSGSSGWGRERSRSPERFRGGPPSTSSPPRSFHEAMMMKN 644
BLAST of Sed0016237 vs. TAIR 10
Match:
AT3G01540.2 (DEAD box RNA helicase 1 )
HSP 1 Score: 837.4 bits (2162), Expect = 8.6e-243
Identity = 457/638 (71.63%), Postives = 509/638 (79.78%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLN-S 60
MAATA + V RYAPED TLPKPW+GL+D +TGYLYFWNPETNVTQYE+P + P S
Sbjct: 1 MAATAAASVV--RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFS 60
Query: 61 SIVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-QEAARSETFHSHDPSNGMP 120
VSVSSSVQ+Q+ + +Y+ D+ DKY R S + E RS +S+ +NG+
Sbjct: 61 PAVSVSSSVQVQQ---TDAYAPPKDD--DKYSRGSERVSRFSEGGRSGPPYSNGAANGVG 120
Query: 121 NTGQGGTQLKGQRPTDA-GSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
++ G + P+ A S LS EAY +RHEIT G VPPP MSFEATGFPPE+LREV
Sbjct: 121 DSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
SAGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIPGF+ L+RIRND R+GPT+
Sbjct: 181 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQ+EAVKFG+SS+ SC CLYGGAPKGPQLRDL+RG DIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISL Q+SYLVLDEADRMLDMGFEPQIRKIVKEIP KRQTLMYTATWPK VRKIA
Sbjct: 301 ILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
+DLLVNP QVNIGNVDELVANKSITQHIE +APMEK RRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 ADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
+MCDQL RNLTRQFGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVKDIR
Sbjct: 421 RMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
VVNYDFP GVEDYVHRIGRTGRAGATG A+TFFG+QD+KHASDLIKILEGANQRVPP++R
Sbjct: 481 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 540
Query: 541 DMASR-SYGMAKFSRWG-SSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQ 600
+MA+R GM KFSRWG SG RGG DSG GGRG S+A + G+ +
Sbjct: 541 EMATRGGGGMNKFSRWGPPSGGRGRGG--DSGYGGRG-------SFASRDSRSSNGWG-R 600
Query: 601 SRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQR 634
RER S +PP P SP +SFH+ MM +
Sbjct: 601 ERERSRSPERFNRAPP----PSSTGSPPRSFHETMMMK 617
BLAST of Sed0016237 vs. TAIR 10
Match:
AT3G01540.3 (DEAD box RNA helicase 1 )
HSP 1 Score: 837.4 bits (2162), Expect = 8.6e-243
Identity = 457/638 (71.63%), Postives = 509/638 (79.78%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLN-S 60
MAATA + V RYAPED TLPKPW+GL+D +TGYLYFWNPETNVTQYE+P + P S
Sbjct: 1 MAATAAASVV--RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFS 60
Query: 61 SIVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-QEAARSETFHSHDPSNGMP 120
VSVSSSVQ+Q+ + +Y+ D+ DKY R S + E RS +S+ +NG+
Sbjct: 61 PAVSVSSSVQVQQ---TDAYAPPKDD--DKYSRGSERVSRFSEGGRSGPPYSNGAANGVG 120
Query: 121 NTGQGGTQLKGQRPTDA-GSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
++ G + P+ A S LS EAY +RHEIT G VPPP MSFEATGFPPE+LREV
Sbjct: 121 DSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
SAGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIPGF+ L+RIRND R+GPT+
Sbjct: 181 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQ+EAVKFG+SS+ SC CLYGGAPKGPQLRDL+RG DIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISL Q+SYLVLDEADRMLDMGFEPQIRKIVKEIP KRQTLMYTATWPK VRKIA
Sbjct: 301 ILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
+DLLVNP QVNIGNVDELVANKSITQHIE +APMEK RRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 ADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
+MCDQL RNLTRQFGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVKDIR
Sbjct: 421 RMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
VVNYDFP GVEDYVHRIGRTGRAGATG A+TFFG+QD+KHASDLIKILEGANQRVPP++R
Sbjct: 481 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 540
Query: 541 DMASR-SYGMAKFSRWG-SSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQ 600
+MA+R GM KFSRWG SG RGG DSG GGRG S+A + G+ +
Sbjct: 541 EMATRGGGGMNKFSRWGPPSGGRGRGG--DSGYGGRG-------SFASRDSRSSNGWG-R 600
Query: 601 SRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQR 634
RER S +PP P SP +SFH+ MM +
Sbjct: 601 ERERSRSPERFNRAPP----PSSTGSPPRSFHETMMMK 617
BLAST of Sed0016237 vs. TAIR 10
Match:
AT3G01540.4 (DEAD box RNA helicase 1 )
HSP 1 Score: 837.4 bits (2162), Expect = 8.6e-243
Identity = 457/638 (71.63%), Postives = 509/638 (79.78%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLN-S 60
MAATA + V RYAPED TLPKPW+GL+D +TGYLYFWNPETNVTQYE+P + P S
Sbjct: 1 MAATAAASVV--RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFS 60
Query: 61 SIVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-QEAARSETFHSHDPSNGMP 120
VSVSSSVQ+Q+ + +Y+ D+ DKY R S + E RS +S+ +NG+
Sbjct: 61 PAVSVSSSVQVQQ---TDAYAPPKDD--DKYSRGSERVSRFSEGGRSGPPYSNGAANGVG 120
Query: 121 NTGQGGTQLKGQRPTDA-GSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
++ G + P+ A S LS EAY +RHEIT G VPPP MSFEATGFPPE+LREV
Sbjct: 121 DSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
SAGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIPGF+ L+RIRND R+GPT+
Sbjct: 181 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQ+EAVKFG+SS+ SC CLYGGAPKGPQLRDL+RG DIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISL Q+SYLVLDEADRMLDMGFEPQIRKIVKEIP KRQTLMYTATWPK VRKIA
Sbjct: 301 ILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
+DLLVNP QVNIGNVDELVANKSITQHIE +APMEK RRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 ADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
+MCDQL RNLTRQFGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVKDIR
Sbjct: 421 RMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
VVNYDFP GVEDYVHRIGRTGRAGATG A+TFFG+QD+KHASDLIKILEGANQRVPP++R
Sbjct: 481 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 540
Query: 541 DMASR-SYGMAKFSRWG-SSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQ 600
+MA+R GM KFSRWG SG RGG DSG GGRG S+A + G+ +
Sbjct: 541 EMATRGGGGMNKFSRWGPPSGGRGRGG--DSGYGGRG-------SFASRDSRSSNGWG-R 600
Query: 601 SRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQR 634
RER S +PP P SP +SFH+ MM +
Sbjct: 601 ERERSRSPERFNRAPP----PSSTGSPPRSFHETMMMK 617
BLAST of Sed0016237 vs. TAIR 10
Match:
AT3G01540.1 (DEAD box RNA helicase 1 )
HSP 1 Score: 837.0 bits (2161), Expect = 1.1e-242
Identity = 459/638 (71.94%), Postives = 508/638 (79.62%), Query Frame = 0
Query: 1 MAATATSVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLN-S 60
MAATA + V RYAPED TLPKPW+GL+D +TGYLYFWNPETNVTQYE+P + P S
Sbjct: 1 MAATAAASVV--RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFS 60
Query: 61 SIVSVSSSVQIQKPSSSQSYSNNNDENNDKYGRSSHEAPK-QEAARSETFHSHDPSNGMP 120
VSVSSSVQ+Q+ + +Y+ D+ DKY R S + E RS +S+ +NG+
Sbjct: 61 PAVSVSSSVQVQQ---TDAYAPPKDD--DKYSRGSERVSRFSEGGRSGPPYSNGAANGVG 120
Query: 121 NTGQGGTQLKGQRPTDA-GSGLSTEAYRKRHEITFVGDNVPPPFMSFEATGFPPEILREV 180
++ G + P+ A S LS EAY +RHEIT G VPPP MSFEATGFPPE+LREV
Sbjct: 121 DSAYGAASTRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREV 180
Query: 181 HSAGFSAPTPIQAQSWPIAIQSRDIVAIAKTGSGKTLGYLIPGFIQLKRIRNDPRLGPTV 240
SAGFSAPTPIQAQSWPIA+Q RDIVAIAKTGSGKTLGYLIPGF+ L+RIRND R+GPT+
Sbjct: 181 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 240
Query: 241 LVLSPTRELATQIQDEAVKFGKSSKTSCVCLYGGAPKGPQLRDLDRGVDIVVATPGRLND 300
LVLSPTRELATQIQ+EAVKFG+SS+ SC CLYGGAPKGPQLRDL+RG DIVVATPGRLND
Sbjct: 241 LVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLND 300
Query: 301 ILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPAKRQTLMYTATWPKEVRKIA 360
ILEMRRISL Q+SYLVLDEADRMLDMGFEPQIRKIVKEIP KRQTLMYTATWPK VRKIA
Sbjct: 301 ILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIA 360
Query: 361 SDLLVNPIQVNIGNVDELVANKSITQHIEALAPMEKHRRLEQILRSQEPGSKIIIFCSTK 420
+DLLVNP QVNIGNVDELVANKSITQHIE +APMEK RRLEQILRSQEPGSK+IIFCSTK
Sbjct: 361 ADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTK 420
Query: 421 KMCDQLARNLTRQFGAAAIHGDKSQGERDQVLGQFRSGSTPVLVATDVAARGLDVKDIRV 480
+MCDQL RNLTRQFGAAAIHGDKSQ ERD VL QFRSG TPVLVATDVAARGLDVKDIR
Sbjct: 421 RMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 480
Query: 481 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGEQDAKHASDLIKILEGANQRVPPELR 540
VVNYDFP GVEDYVHRIGRTGRAGATG A+TFFG+QD+KHASDLIKILEGANQRVPP++R
Sbjct: 481 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 540
Query: 541 DMASR-SYGMAKFSRWG-SSGSNSRGGFNDSGSGGRGGRGSSSFSYAKPEQGGGRGYDFQ 600
+MA+R GM KFSRWG SG RGG DSG GGRG S S + G GR
Sbjct: 541 EMATRGGGGMNKFSRWGPPSGGRGRGG--DSGYGGRG----SFASRDRSSNGWGR----- 600
Query: 601 SRERYDSGNNRGCSPPDRSAPERERSPVQSFHQAMMQR 634
RER S +PP P SP +SFH+ MM +
Sbjct: 601 ERERSRSPERFNRAPP----PSSTGSPPRSFHETMMMK 616
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022152148.1 | 0.0e+00 | 81.79 | DEAD-box ATP-dependent RNA helicase 14 [Momordica charantia] | [more] |
XP_038903376.1 | 0.0e+00 | 80.91 | DEAD-box ATP-dependent RNA helicase 46 [Benincasa hispida] >XP_038903378.1 DEAD-... | [more] |
XP_011652287.1 | 0.0e+00 | 80.10 | DEAD-box ATP-dependent RNA helicase 46 [Cucumis sativus] | [more] |
XP_022982654.1 | 0.0e+00 | 81.21 | DEAD-box ATP-dependent RNA helicase 46-like [Cucurbita maxima] >XP_022982655.1 D... | [more] |
XP_008443543.1 | 0.0e+00 | 79.46 | PREDICTED: DEAD-box ATP-dependent RNA helicase 46 [Cucumis melo] >TYK00823.1 DEA... | [more] |
Match Name | E-value | Identity | Description | |
Q9LYJ9 | 1.3e-248 | 71.32 | DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 P... | [more] |
Q8H136 | 1.2e-241 | 71.63 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 P... | [more] |
P46942 | 2.9e-227 | 67.99 | ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=... | [more] |
Q5VQL1 | 4.6e-217 | 60.17 | DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q5JKF2 | 1.2e-209 | 57.69 | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DE30 | 0.0e+00 | 81.79 | DEAD-box ATP-dependent RNA helicase 14 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A0A0LG68 | 0.0e+00 | 80.10 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838660 PE=4 SV=1 | [more] |
A0A6J1J570 | 0.0e+00 | 81.21 | DEAD-box ATP-dependent RNA helicase 46-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A5D3BM24 | 0.0e+00 | 79.46 | DEAD-box ATP-dependent RNA helicase 46 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3B7U1 | 0.0e+00 | 79.46 | DEAD-box ATP-dependent RNA helicase 46 OS=Cucumis melo OX=3656 GN=LOC103487108 P... | [more] |