Lag0007937 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007937
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr9: 8599711 .. 8611813 (+)
RNA-Seq Expression	Lag0007937
Synteny	Lag0007937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTACTCGATGTTTTGCAGGAACTTCAGTGACACTCGATGTTTTGGCTTTGGTATTCAAGAGCACATTGATCTTGGAATCAAGTAAGCCTTTATACTTCTGAATATCCTTTAAGTTATGTTCCAAATTTTGTATGAAACTTACTGTTTAGTCTTCAATCTATTTGGAGATCTATAATCTGTTTTGCTTAGGTGATTTAGTTTTGTATTGCATATGAGTGTAGTTAACTTGAAATGAAACATTCATTTGCATGACGTTTTTAGCACTGACTCTCTTTGAATGGGGATGGATGTTGCTAAATTATCACCACCTGTGGCTACTAGCACTTGAAATTCTAGGTATTTGATTTTAGCAACCAATGATGTATTTTCTTTTTCTTTCTTTCTTATAACCTCTCTCTGTTTAACCTTTTCCTCTCCCTTGGGTGGATTCCAAATTAACCTTGTTTCCATTTTCAAACAATAAATCAGTTTTCTAACCTTGTTTGATTGACGGGTATTTAACATTTCCTTTATGTATTTCCAAAATATATTTAGGTGATATCATTGAATTAATGGAATCATTAATTGTCCTGAAACATTCATAACCATTATAACTATAGCTAATTATTTTTAGGGAAAAATACACTTTTAGTCCCTGAGGTTTGGGTTAAGTGACAGTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGTAGCATTTTGGTCCCTGCCGTCTATTTTTCTGTTAAATACTAACGGTTGCTGACGTGGCACTATTATTTTAATAAAAAAAAATTATTTTTTAAATAAAAACATATTAAAATAATAAAATATTTATTATTTTATTTAAATTCTTTCTCTCTCTCTTCCTTTCTTCTCCCCCATCTTCTTTCAACCTTCTTATCTCCTTCTTCTTCTTCAGCTCCGGTGGCCGGCCGCCACCGGCTGCCGGTGAGCGGCGGCGGCGGCGGTCGGAATTTTTTTTTTTTTCTTTCTTTCTCCCCTTTTCTTCTCTCCTTTCTTTCTCTCTTTCCTTCAATTTTTTTTTTTAATAAAAAGAAGGGAGAGGGAGGAGGAGCCCTCCTCCCTCTCCGGCGTCGGCGACGGGAGGAGGGAGGGCCCCTCCTCCCTCTCCCTTCTTTTTATTAAAAAAAAAATTAAAGGAAAGAGAGAAAGAAAGGAGAGAAGAAAAGGGGAGAAAGAAAGAAAAAAAAAAAATTCCGGCAGCCAGCGGCGGCTGGCGGCGGCCGGCCACTGGAGCTGAAGAAGAAGAAGGAGATAAGAAGGTTGAAAGAAGATGGGGGAGAAGAAAGGAAGAGAGAGAGAGAATTTAAATAAAATAATAATATTTTATTATTTTAATATGTTTTTATTTAAAAAAATATAAAAAATAATATTTTTTTATTAAAATAATAGTGCCACGTCAGCAACCGTTAGTATTTAACAGAAAAATAGACGGCAGGGACCAAAGTGCTACTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAACTGTCACTTAACCCAAACCTCAGGGATTAAAAGTATATTTTCCCTTATTTTTACCACCATAGCTTTCTTTCCGCTGCTAATTTCAATTGCAATGAGTGTTTACTTTATCATGCTCTCTTTCCCACCTATTGAATGTATTTGTGTATATATATGTATGTATGTAAATTTTAAAATCATTTTTAACTCTTTGTTGCTTTTGTGAGTGTAATTTAAATGATGTTCTTGCTCATTTTCTACTCTATTTTCCTTTTCATTGCTAGTTCACTTGAAGATGTGCAAAATATAGTGTGTGAAACATTGCTTTGGTGTATTTCAAAGTTTTTTTTTAATCCCTTCTTGAAGTACTTTTTCTTACGAGAAACATAAAAGGTGTTAGTTCTTGAACATATGGAGATAAACAGAGATGAATACCCTTTTGTGAAGTGAGATTTGATTCAATATCAAAAGGTTATTTTTGTATTCAATGTGAGTGATGCCAAAGCATACCACTGCTAGCATCTAAAATATATTTTGCAATACTTTTGCAGCTTCTTGGTGTGTGCAAGTTTGAAAGGGTTTTTCAATTATTTTATATTTGTTACAATTGGCAAACTTTTTATGGCAATTTCATCTTTCAAGGCTTAGAATTTGGGGCTTTTTTGTAAAGGTCCTTGTAAATTTAGTGTGGGGCCAATTTCTTTCTTTTTGGAGGAAGTTTGTAACTTTGAACATAGTTGAAAGTTTAATTTTACTTTACTTTGTGAAGTGGTATGTGGAGATGTTTGAGTTACTTGATCATAAACCTTTGATCCAATGAAAAGTTATTTTGGGCTATTTTAATTCTATGTTTGGATTGGGTGGAGTCTAGTTTCATGATGCTTATGTCAATTATATTACCTTTTGATGGTTGTGTTAGTTTTTGATCAAATATATTTTGAATGAAATCCTAATTAAGGGTGATAGGATGGAAAGCATGTCTTCTTGAAAGAAGACTTAGAGGGTTTTGCTTAGTTTGGGGAGGGATTGTTGTGATTTTTTATTACAAATATATTCTTTCAACATTTCCCTTCTTTATGTGTCCTAGTTTTTGGAAAATTGTGTGATGTCATGTTGTATTATGTCATATCTTGTTGTTATTGTTTTTCCTTTGGTCATGTAAACATTCTTCTTTGTCAACCGCGGTTTATTTTATCATCAAGATGATATGCATACATGTTTATGACTCCATAAGTGTCATCCCCAAGTCATGGAAGGAATTTGGTGACTTTGCATGAAATTGAGGCTACTAGGCTAGTTCATGAAATATTTTGAACTTTGTGCAGTGATGCTGAGGAGGAAGTTTTATCCCACTGCCACAAAGTATTGGCTTCAGGCTACAATAAGTAGTTGCTTTGGAATGAATTTCTGTTGATGTCTCTTAAAAAACTAATAAAACAAAGATGGATGATTAGTGGTAATCCGTAAATGTATCCAGAACATGCTTCCTCATGTCTAGCCTACCAGAATCGGTTGTTCTCTTGATTAAGTTTCATATTTTTAGGTTTGTTCTACTTGGAAACTAGTTATTTTTCCATAAATTGCTAAGATGATGCTCAAGGGTTGTAAAAGAAAGTATTATTTGCTATCAATGCTTATATGTGTTTAATCATATGTACTCAATATTAGATGATTTGAGTTGTCAAATTTGTTAATGCTAAAATTGCACTGTTATTGGTGCTATTGGTTTTAAGTTCAACATGCTCCTACTTTTGTTCTTACTTCTTGCTACTATTGCGAATTCTTGGCTACTACTGTTGGGGCTTTGTTAATGATGCTAAGACAATTGTTGGTTGTTTATTAAGTGTTGGTTAAAAAGTTCACTAGACACTAAAAAGCTAATTAAAGTGTTGGTTGTTTATAAAAATTGTTGGTTGTTTATTAAGTGTTGGTTAAAAAGTTCACTTGACACTAAAAAGCTAATTAAAGTGTTGGTTGTTTATTAAGTGTTGGCTAAAAAGTTCGTTTGACTCGCTTAGTTTGAGGATATTTGGAGTCTTGTTATGAACCTGAAATGTCGTGAGGTTGTAGTTGGGTAGTTTTTTATATAGAAGTGTGTTTATCTTGTTTAACAGGTTTAAAAAAATTTGGGTTAGTCTTATGTATGTTGTTATGCTGTTGAAATTTTTGGAGTATCCGATTAGAATTAAGATAATTAACCAAAACCTTTCCTAATTACATTTTGAATAGCTATTTTGATCCCTTGTTAGTCTCTTTCTATTTAGTTCTATGTGAAGTAGTTACATGTGTTGTCATTTTTCGTTTCTCTTAGTTAGTTTTGGTTTAATGGTTTGGGATTCTAGCTTAAATTATGCTTTTCTTGAGTTATTACTTTTTTTCATTAGCGAATTATCATGTTTTGTTTTTCAAGATTGTTCATGTTCTTAGGAATTTATCAAGTTTTGTTTTCTTTTGTCCTATATGGACATGCACGTTTATAAGATTTTGAGTTTAATATGAAAGTAGAAGCATATTGTGTATTTCCTTTTATAATGCAACCTTTTAGTCAATTTTCATTTTGCTTGGTTTAGGGGAGGGGTGAAGAGTTTAGGAGATACCTTGTGACTTCGTTGTGATCTCTTACTTATAGTTGGGTAAAATTTGGTCAAAAAATAACTTCCAAGATTTTTTTTTTGGGATGGGGGGGGAGTTTAGAAGTGTTACACTTGTGATTTTGTTACGATATTTTGCAATGCATATTATACACTTGTAGAATAAGTGAAATTTTGTTGAAAAAGACTCCAAGGGTTTTGCTTTATTGTTTTATGGAAAATGAGGAAGACTACAAGTGTATGTTGTGTTGGATAAGTGTATGTTGTTTGATGGTTCTTTAGGTGTGAGTCATTTAGTGCCATGGTTTGTACTGACCTACCATCAAATTTTGTAGGTGATGAGGATTACTGCGAACCGGGTGATGCTGAGGAAGAGGTCTGAGGAACAATAATAGCTCTCTAAGTCTAAATTTCATTGTTGTCTTGTGCTTAAATAGTGGTTGTTAGAAAGACTTAGTTGTTTTATTTAGTTGGGTGTTATTTAATTCGAGGGACATATCTTACTCTTGTGGTTAGCATTGTGTTAGACTTGTAAGTTTATTTGAGTTATTTAAATGAAATTTGTTATGAGATTTTACTCGTAATTCTATTTGGAATTCTCTGAAGTTATGTGTTCTCTTAAGTAGGTGGTTGAAATTTTTGGGTGAGCTATTGTTACGTTGTTATGCTGTCGAAATTTTAGAAGTGTTTCAACTAGTAATAGGGATAAATTTGGTAATGTCATTTATAATAGGTAAATTTTGGTACTATGTCTATTCTTGAAAATTTATTTCGATGCAAGTGCATTTAAATACATTGTATGTTTATATAAATGAGTTTATTTTACAATAACATTTGAAAATATTTGGTACTCATATAAAATGTTATAGAAATTGTTACATATTACTCAAAAATGGTACAAATGTATGTGTGTATGTATAAATGCTATTAAAAGTTACCTACTATCCATAACATTGCCTATCACGATGATGAGATGAAAAATGATTATATTTTGATAACATTTTTAATTGTTATAAAAAGATGCTATTAAAGAGCAATCATAGCATTTTTTGCTAGCGTTATGAAAAGTTTTTATAACATTAAAAATGTGCAATAAAATTTTGATTTTTTTATAGCTTTTTCTATAACTTTGAAAAAACGCTATAAAAAGTCAAAGACTTTCAATAACATCGGCTATGACAGCGTGTCTAAAAATGTTATGATATACTTTTTATAGCGTTTTTTACTGCTATAGAAAACACTATTAAAAGGCAATCATAGCGTTTTTTGCCAACGCTATGAAAATTTTCCATAACATTAAAATTACGCAATTGAAACAGAATTTTTATAGCCTTTTTTATAGCGTTGAAAAAACGCTATGAAAAGTCAGAGACTTTCAATAACATCGGCTACGACAGCGTTTCAAAAAACGCTATGGAAAGCCTACGATAGCGTTTTTTTAATGTTATCGTAAGTGATATTTGTTGTAGTGTTTGGCAATTCCAGTGTCTACAGTTGCTTCTGAGTCTACATTAAGTACTGGTGGAAGAGTGATAGATCCTTTTCGCTCCACATTGGCTCTATCCACAGTTGAGGCACTTATTTGTGCACAAAATTTGTTACGTTCTAATGCTATCAATATTGATCTTCAATCACATTTGGAAGAAATTTCTCGCTTTGAAGAAGGTTTGAAACTTTTTAATCTTTAAATATTAATTTCAATATTCATTAATTTTCTTAATTATTATTATTATTTTGTATTTGTAGATCTCAAATCATGCACGGAGGAAGCAACTAAAGGACAAGGAACAAAGGAAAATGTTTAATTTGAAGTGATAATTGAAGTTTGAAGTTGAAATGTTTGCTTTTGCTTTTTACAATTTGTTGTTTTTTAAGAATTTAATTTAGTTTATAATGTTTTAATTTTATAGTGAAGTAAAAGTTTTTGTTATTTTGTCATCCTTATTCCTTGGAGCGATATTCAATTCCATTATTAATCTAATCATTCTCATTATCCATTACACTTGTAAAAATTTAATTTGTAAATTAATTTTTAAGAACCAACATAGATGGGAGTGCAATGCAATTAGGATCCAAAAATAATTAAAGGCTGAAATTGGAATTAAATTCTATTTTTTTGCTCAAGACAAAGCTGCAAATCAATCAAATTCTGTAAAATACAAATAAAGTAAAAAAAAAAGTTTCAATGAAAAGTTTCACTTCTCAGTTCCCACATCGGTAAGAATGAATTTTGGAGCAATCTTGTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACTGTTGACCGGATATTAATGAAATAATATTGATATATTTTCCATTAATTGTTATTAGTTATTTTATATTTGGTTTTGCCTAAAAATAACCCTAATCCAATAAACTAGACATCCAAGGCTGTAATATGAGTCTTGAACTATATGTAGTGACATATGAGATCATTGTTCAAGAAACAACCTAAAGGGTCTATAGTATAGGGATAAGACTGGGTGTCTTATCCTGGTGACACTATGGATACGACCCACTTTGTATTTGATACAAACGCTGCGATCCAACGCGTTCGTGTAGAAGACATGTGAATGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAATAACCACTGGTTATAACACCGTTAACTAGTTGGTTTTCTATTTCACTAGGACGACCTAAACAACTTAGTCTTAATCCTGAGTTGATTATGGACTCCTGCTCATGAGGGACTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAATACGCCGATTCAATAAGCCTACCATTTTGGGTACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCCCAACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTTACTCCGAGTCTTGAACAAAGGGCCCTACCCTCTCAATGGCACGAGAGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTATAGGAGAACTGGTACTTAAGGAAATAGAAATAACCCAGGGGTAAAACCGTAATTTGACCCAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAAATCCGTGGACACAGAAAATATGTCTGCAGTGAGAATAGTGCAACTGTGAGTCTATAGTGGAATGTACACAGTTAACGAATATTGATTAATGTGGTTAATGAGTTTGACCAATTAATCTCACGTCGTTGGAGTTTCTGATCTGCAGGTCCATTAGGTTCCACTGGTAGCTCATAAAGTAATTTGAGGCAACTAAGTAATAAATGTAAATTGAAAATGTTCAATTTACTGAGGGAAACAAATATAATATATATTGATATATTATTATGAGATAAATTAATATTTGAAGAAATTCAAATATTAATATAAATTTATGGAAATTTGAAAGAGTTCAAATAATGAATTAATTGAACGCCTAAAATCTATTTGGGCAAATTAATTAATTCAAGGCCGGAAATTAAATATGTGATATTTAATTGGTGGTTAATTAATTAAAGAATTCATTAACCGGTAATTAATCAATTATGGAAATAATTAATCACTTAAGGAAGTGATTAATCATTTATGAAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTGTGGAAAAGATTGATCTATTATGGAATTGATTGATCATAGATTGATTAAATAAGGAATAAGATCGAATCAATTTTGGAAAAGATTGATTTAATTGAATATTTTATTCATTGCCTCTCTTCTATAAATAGAACACTAGACCTAATTGGTCCATGACACTTTGCTCTTGCTCTTAGACTCTCAAGACAAAACCTAGAATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATATCGGTGTAACCTCTGTGGTTATTGTCTCATCCAAGAAGAAATTTCCAGCGATTATAAGACAAGGAGGCTGCTGCGTTTTCGTTCGTTGGAGCGTTGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGTTTGTAACGGTTCTTCCCTTTTCTTTAGAAAAGCATGAAAATAAATTTAGATTTATTTTTCAGCATGTTTAAACAAATTTCCCAGCAGCTTTAAAGTGTGTTTAAAGTTTGTTTGAGTTTTTCGTAACGGTATTTTAATGTTAATTAATATACGGTGTAAGGTCCAATCGATGCGCTTCTGCTGCGTGGGGACTTTTATTCCCTTCACTTATAACCTATAAAAGCCAAAGGATATGGCTGAGATTCTATAAAATACAAATAAAGTAAAAAAAAAAAGCGTGGGTTGTGCGTGTGCGATTAGTACAGGTGTGACCCGTGTTGTCCAGTTCAATTGCGCGCAGTTTGTCGATTACACAACCGAACCGAACCGTCGCTTCGGCGCGGTTTGGTACAAATATCGATTCGGTGGCGGTTTTAATATTTTCTTATCCAAATAAGCGGTTTGGCTTCGATTTTGTACAGTAACCGAGCAGCTTGCACCTTTAAACCGTATGCCTACTTCTTCACTCAATATGTCTGTTGGATTTTATGTCCTAAAACTCGTAGATAGTGAATGATTAACGGATTATACACTTGTATCACTAAAGTGTTATTGAGGTTTATGCAATAAAGTGTTATTGTCATATTAAGTCTAGAATTGCACAATATGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTGATATGTAACTTGAACTAGTATGTGGGACATACGGGGATCAGTGTTCAAGTAACAACCTAAAAGGTCTATAGTACAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATATAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGATATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTAACACCGTTAACTAGTTAGGTTATTGTTTCAATAGGATGACCTAGGTAACTCAGTCTTAATCCTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGTACGGGTGAGAGTGGCCTGCACGCCGACTCAATAAGCCTACCTTCTTGGGGACAAGACCGAGTGGGGGGCTGGGGACATGACAACACAAGATGGAATTCACTCCTTCCCGCTTCTAGGAGAAGTAGATGAGTGTTCCCTTAAGTGGTGACTCCAGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTAGTACTTAAGGAGCCAGAGGTAACTCAGGGGTAAAACGGTAATTTGACCCAGCTGTAGTTACGAACACTCGTGAAGGATTGACTTACCGTTATTGGTCAATATCTGTGGACACAGAAATATTCTACAGTGAGAAGAGTGCAACTGTGGGTCTTTAGTGGAGTGACCCACAGTTAATGAATATTGGTTAACTCGATTAATGAGTTTAGTCAATTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCCCTGCTAGCTCGTAAAGAGTAATTGGGAACATTTTATCTTGAAAAGAATTTGAATTGTTCAAATTCAATTTGGGAATCAAGTTAATTGTGTGAAGTACAATTAATATAATGTATATTGATACATTATAATATAAAGTTTAATTTGTGATTAAACTTTATTAAATTGAGAGAATCATATATTTGAAAGAGTTCAAATATATAACTAATTAAATATGTGATATTTAATTAATGAATAAATTAATTAATTGTGAATTAATTAATTATTCAATTAGTCTAATTAAATGTGATTTAATTAAACTATAATATTTGAGAGATATATATTAGAATATGATTCTAATATGTAATTAGTTAAATATGGTTGATATTTAATTAATTATAAAATTAATTAATTTTGAATTAATTAATTGATCAATTTAATTTAGTTAAATGTGATTTAATTAAATTAATAACTATAGATAATCTAATGTGAATATGATTCGTATTAAAACTATAGGTTATAAGAGAGATGCACTTTTGAATATGATTCAAATGTATGATTAATTAAATATGTGATATTTAATTGTTCAAAGAATTAATTAATTACAATTATTTAATTTTTATTTAATTAATTTAATTAAATGTGATTTAATTAACATTAATTAAAACTATATACTGAGGGTTGTGCATTTAATATGATTTAATGCACATATAATTAAATATGAGATGTTTAATTATATAGTTAATTAATTAAATGGTTTAATTAATTAATGTTTAATTATTTAATTCATATTATAATGTAATTACAATATGATTAATTAATTAAATAACCAACTCCCCAATTTGAGGAGTGGTGATTAAACTCACGCTAGAGGGGTCTCTTAGAGCTCCTCCATTCTCTCTACAAGATCAGACAGCATCTCTTAAGAGTTTTTTTTTCTCTGTCCTCTCTAAAATTCTCTCAACGAAAGTCACAGAGAGTTTTTCTCCTTAGTGATTTCTTCCTAAATTCAAGAAATATGAGATCCCACAATCTCGTTTCCAAACTCAGAGAATAGTGGGGTAATCTTGTGGTGGTGTCCCAAGATTTCATTTTTGGTCCCTGACATTCAAGGAGGTGTTCTTGAAGAATTCAGAGTCGTCAGACGACGGTGAGTTTGCTTAACCTTAGTTTCGTAGAATTATGAATTCGTAATTGCCAATGTACTGGTATTTTGTAGAACGAAATTAAATTGCGAATCGGTCCAATTGCTTCCGCTGTAACGGAATTGGGAATTCCAATCCTTCAATGTCATCTCCTTTTGAGAAACTTTTTTGTTACACTCCTGATTTACATCATTTAAGAGTTTTTCTGTGTGCATGTTATCCTTTATTGAAACATTATACCAAGCATAAACTTGAACCTAAAACCTCTAAACATATTTTCCTTGGTTATACTCTAGAACTATCACCAAAACATCAATTGTTTCTCGCCATGTTATTTTTCACGAAATAATATTTCCTTTTGCCAAACATTTAGATTCTCCAAAACCTGCCACACCTTCTCATCCTAACATAACACCCTTATTCACCCTTTTACATACATCTCCAAGCCCATCTTCACCTTCCGCACCTACCCAATTATCCACTGTTGACACTAATTCTTCTCCTCAAGAGATTTTGCATGTTTCACCTTCTAGTATTGCAGATTTACTAGCAGATGAGCAATCTCATGAGCATTCAGTATTCCAAAATGTTCACATTCCTGCAAGCACTGTCAATAATCATCTGATGCAAACACGAGCTAAGTTAGGACCTTTCAAGCCAAAGGCGTTTGTCTCCACCATGACCACTTCAGTTCCAACAGATCCTTCTTCATATTTTGTTGCATCGAAGTATCAAGAATGGAGATCCGCTATGTGTGAGAAATTTAATGCCCTTCAGGAACAAGGTACGTGATCCTTAGTACCTCGTTTACCTTCCATGAATGTTGTGGGTTGCAAATGGATCTTTAGGACCAAATATAACACTGATGGCACTATTGCTCGATATAAAATCTGATTAGTTGCTAAAGGATTTCATCAGGTCGAAGGGTTTGACTTTAGTAAAACCTTCAATCCAGTTGTTAAAAAGCCCACAATCAGAGTTATCCTCGCTCTTGCTGCTCATTATCAATGGTCTTTAACTCAATTGGATGTAAAGAATGGTTTTCTACACGACCACTTAAAGAAGAAGTTTATGTCTCAACCACCTGGCTTTCTTGACAAATCCAGTCCACATCATGTTTTTCGCCTTCATAAAAGTCTATATGGTCGAAAGCAAGCTCCTCGAGCTTGGTTCGATCGCTTTACATCATATCTATTCACCTTGGGATTTACTGCTTCTTCTGCGATTCATTCTTATTTGTACGCTCGGTTGGATCTTCTTTGA

mRNA sequence

ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTACTCGATGTTTTGCAGGAACTTCAGTGACACTCGATGTTTTGGCTTTGGTATTCAAGAGCACATTGATCTTGGAATCAACTCCGGTGGCCGGCCGCCACCGGCTGCCGTGATGCTGAGGAGGAAGTTTTATCCCACTGCCACAAAGTGTGAGTCATTTAGTGCCATGGTTTGTACTGACCTACCATCAAATTTTGTAGGTGATGAGGATTACTGCGAACCGGGTGATGCTGAGGAAGAGTGTTTGGCAATTCCAGTGTCTACAGTTGCTTCTGAGTCTACATTAAGTACTGGTGGAAGAGTGATAGATCCTTTTCGCTCCACATTGGCTCTATCCACAGTTGAGGCACTTATTTGTGCACAAAATTTGTTACGTTCTAATGCTATCAATATTGATCTTCAATCACATTTGGAAGAAATTTCTCGCTTTGAAGAAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAAATCCGTGGACACAGAAAATATGTCTGCAGTGAGAATAGTGCAACTGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATATAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGATATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTAGTACTTAAGGAGCCAGAGGAGGTGTTCTTGAAGAATTCAGAGTCGTCAGACGACGATTCTCCAAAACCTGCCACACCTTCTCATCCTAACATAACACCCTTATTCACCCTTTTACATACATCTCCAAGCCCATCTTCACCTTCCGCACCTACCCAATTATCCACTGTTGACACTAATTCTTCTCCTCAAGAGATTTTGCATGTTTCACCTTCTAGTATTGCAGATTTACTAGCAGATGAGCAATCTCATGAGCATTCAGTATTCCAAAATGTTCACATTCCTGCAAGCACTGTCAATAATCATCTGATGCAAACACGAGCTAAGTTAGGACCTTTCAAGCCAAAGGCGTTTGTCTCCACCATGACCACTTCAGTTCCAACAGATCCTTCTTCATATTTTGTTGCATCGAAGTATCAAGAATGGAGATCCGCTATGTGTGAGAAATTTAATGCCCTTCAGGAACAAGTTGCTAAAGGATTTCATCAGGTCGAAGGGTTTGACTTTAGTAAAACCTTCAATCCAGTTGTTAAAAAGCCCACAATCAGAGTTATCCTCGCTCTTGCTGCTCATTATCAATGGTCTTTAACTCAATTGGATGTAAAGAATGGTTTTCTACACGACCACTTAAAGAAGAAGTTTATGTCTCAACCACCTGGCTTTCTTGACAAATCCAGTCCACATCATGTTTTTCGCCTTCATAAAAGTCTATATGGTCGAAAGCAAGCTCCTCGAGCTTGGTTCGATCGCTTTACATCATATCTATTCACCTTGGGATTTACTGCTTCTTCTGCGATTCATTCTTATTTGTACGCTCGGTTGGATCTTCTTTGA

Coding sequence (CDS)

ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTACTCGATGTTTTGCAGGAACTTCAGTGACACTCGATGTTTTGGCTTTGGTATTCAAGAGCACATTGATCTTGGAATCAACTCCGGTGGCCGGCCGCCACCGGCTGCCGTGATGCTGAGGAGGAAGTTTTATCCCACTGCCACAAAGTGTGAGTCATTTAGTGCCATGGTTTGTACTGACCTACCATCAAATTTTGTAGGTGATGAGGATTACTGCGAACCGGGTGATGCTGAGGAAGAGTGTTTGGCAATTCCAGTGTCTACAGTTGCTTCTGAGTCTACATTAAGTACTGGTGGAAGAGTGATAGATCCTTTTCGCTCCACATTGGCTCTATCCACAGTTGAGGCACTTATTTGTGCACAAAATTTGTTACGTTCTAATGCTATCAATATTGATCTTCAATCACATTTGGAAGAAATTTCTCGCTTTGAAGAAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAAATCCGTGGACACAGAAAATATGTCTGCAGTGAGAATAGTGCAACTGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATATAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGATATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTAGTACTTAAGGAGCCAGAGGAGGTGTTCTTGAAGAATTCAGAGTCGTCAGACGACGATTCTCCAAAACCTGCCACACCTTCTCATCCTAACATAACACCCTTATTCACCCTTTTACATACATCTCCAAGCCCATCTTCACCTTCCGCACCTACCCAATTATCCACTGTTGACACTAATTCTTCTCCTCAAGAGATTTTGCATGTTTCACCTTCTAGTATTGCAGATTTACTAGCAGATGAGCAATCTCATGAGCATTCAGTATTCCAAAATGTTCACATTCCTGCAAGCACTGTCAATAATCATCTGATGCAAACACGAGCTAAGTTAGGACCTTTCAAGCCAAAGGCGTTTGTCTCCACCATGACCACTTCAGTTCCAACAGATCCTTCTTCATATTTTGTTGCATCGAAGTATCAAGAATGGAGATCCGCTATGTGTGAGAAATTTAATGCCCTTCAGGAACAAGTTGCTAAAGGATTTCATCAGGTCGAAGGGTTTGACTTTAGTAAAACCTTCAATCCAGTTGTTAAAAAGCCCACAATCAGAGTTATCCTCGCTCTTGCTGCTCATTATCAATGGTCTTTAACTCAATTGGATGTAAAGAATGGTTTTCTACACGACCACTTAAAGAAGAAGTTTATGTCTCAACCACCTGGCTTTCTTGACAAATCCAGTCCACATCATGTTTTTCGCCTTCATAAAAGTCTATATGGTCGAAAGCAAGCTCCTCGAGCTTGGTTCGATCGCTTTACATCATATCTATTCACCTTGGGATTTACTGCTTCTTCTGCGATTCATTCTTATTTGTACGCTCGGTTGGATCTTCTTTGA

Protein sequence

MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGINSGGRPPPAAVMLRRKFYPTATKCESFSAMVCTDLPSNFVGDEDYCEPGDAEEECLAIPVSTVASESTLSTGGRVIDPFRSTLALSTVEALICAQNLLRSNAINIDLQSHLEEISRFEEAGVTDTREGLTSRYWSKSVDTENMSAVRIVQLDKAGYLILVTLCDTARFVFDIDVLIQGVHVGDMRAGISYAMSLHKTGPRNSKPLDVLNKGIPPSHWPERDFLFTGWTINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQVAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKKFMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYARLDLL

Homology

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BLAST of Lag0007937 vs. NCBI nr
Match: KAA0056830.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ99954.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-44
Identity = 110/205 (53.66%), Postives = 144/205 (70.24%), Query Frame = 0


Query: 317 SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVN 376
           SP P+ P+     S+  TN ++  + L+VS +       + ++  ++   N+H+P    N
Sbjct: 49  SPPPNPPAVDITYSSFITNTNATSQSLNVSST------VNIRNDINAATTNIHVPPPPRN 108

Query: 377 NHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---V 436
            H MQTR K G FKPKAF   +TT++PT P+SY  ASKY +W +AMCE+F+ALQ Q   +
Sbjct: 109 THTMQTREKSGIFKPKAF--HITTALPT-PTSYTEASKYPKWCTAMCEEFDALQAQARLI 168

Query: 437 AKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMS 496
           AKG+HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLHD L++  +MS
Sbjct: 169 AKGYHQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQLDVKNAFLHDILQETVYMS 228

Query: 497 QPPGFLDKSSPHHVFRLHKSLYGRK 517
           QP GF DK+ P+HV  LHKSLYG K
Sbjct: 229 QPIGFKDKTYPNHVCPLHKSLYGLK 244

[Close]

BLAST of Lag0007937 vs. NCBI nr
Match: XP_022158189.1 (uncharacterized protein LOC111024722 [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-43
Identity = 126/294 (42.86%), Postives = 163/294 (55.44%), Query Frame = 0


Query: 296 SPKPATPSHPNITPLFTLLHTSP----SPSSPSAPTQLSTVDTNSSPQEIL------HVS 355
           S  P   S  +I P F  +   P    S SS   PT ++T     +P  +L      H  
Sbjct: 330 SDHPVVVSSSSIAPNFYAVSVPPTHNMSFSSAPLPTAMTTASIIVTPAPVLLEAFSPHKD 389

Query: 356 PS-SIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAF-VSTMTTSVPT 415
           P+ S   +++       S   +       +N HLMQT AK G FKP+A+ V + + ++ T
Sbjct: 390 PTLSSFPIVSPSDPTCPSTSCSSVTDVRPINAHLMQTWAKSGIFKPRAYLVLSESITIHT 449

Query: 416 DPSSYFVASKYQEWRSAMCEKFNALQEQ-------------------------------- 475
            PS    A+++ EWR+AM +KF ALQEQ                                
Sbjct: 450 KPSPSTEAAQFSEWRAAMSDKFLALQEQGTWSLVPRTPDMNVVGCKWVFHTKFNSDGSTA 509

Query: 476 ------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHL 535
                 +AKG+H++EGFDF +TF+PVVKKPTIRV+L+LAAH+ WSLTQLDVKN FLH +L
Sbjct: 510 RYKARLMAKGYHKMEGFDFEETFSPVVKKPTIRVVLSLAAHFNWSLTQLDVKNVFLHGNL 569

Query: 536 KKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS 539
           +K  FM Q   F+D S P +V  LHKSLYG KQAPRAWFDRFT+YLFTLGF AS
Sbjct: 570 QKDVFMYQSVCFIDTSCPDYVCCLHKSLYGLKQAPRAWFDRFTNYLFTLGFEAS 623

[Close]

BLAST of Lag0007937 vs. NCBI nr
Match: KAA0066360.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK00923.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 6.5e-43
Identity = 116/230 (50.43%), Postives = 147/230 (63.91%), Query Frame = 0


Query: 332 VDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPK 391
           +DTN++ Q  L++S       + D  +  ++   N+  P  + N H MQTRAK G FKPK
Sbjct: 1   MDTNATCQS-LNISS------IVDTGNEINATTINLPDPPPSRNTHAMQTRAKSGIFKPK 60

Query: 392 AFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---------------VAKGF 451
           AF   +TT++PT P+SY  ASKY EWR+AM E+FNALQ Q                 KG+
Sbjct: 61  AF--HITTALPT-PTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVPRLPSMNIVGCKGY 120

Query: 452 HQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPG 511
           HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLH  L++  +M+QP G
Sbjct: 121 HQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTG 180

Query: 512 FLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYL 546
           F DK+ P+HV  LHKSLYG KQAPR    +F      + F+A   I  YL
Sbjct: 181 FQDKTCPNHVCLLHKSLYGLKQAPRPC--QFMHKPTVIHFSAVKRILRYL 218

[Close]

BLAST of Lag0007937 vs. NCBI nr
Match: CCH50966.1 (T4.5 [Malus x robusta])

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-38
Identity = 121/335 (36.12%), Postives = 161/335 (48.06%), Query Frame = 0


Query: 268  NRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTL-LHTSPSPSSPSAP 327
            NRL+I   +V  E    +   S  +   SP  ++P HP ++    L +      SSP+A 
Sbjct: 1001 NRLYISRHVVFDESLFPYKSLSSQASHHSPCVSSPLHPPMSLHLPLPVSHLEQQSSPAAA 1060

Query: 328  TQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPAS-----TVNNHLMQT 387
             +      N+SP  I   +  +     A E  H   V  +   P        VN H M T
Sbjct: 1061 LE----GRNASPPSIFSTAAHTTIPSSAQESLHTPPVSSSPAEPPPLPPPIPVNTHTMIT 1120

Query: 388  RAKLGPFKPKAFVST---------MTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ- 447
            RAK G  KPK F +T           T++P  PS++  ASK   W  AM  +F ALQ   
Sbjct: 1121 RAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQSTG 1180

Query: 448  -------------------------------------VAKGFHQVEGFDFSKTFNPVVKK 507
                                                 VAKGFHQ EG DFS+TF+PV K 
Sbjct: 1181 TWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPVAKP 1240

Query: 508  PTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLY 549
             TIR++L++A  Y W + QLDV N FLH HLK+  +M QPPGF+D S PHHV +L KSLY
Sbjct: 1241 TTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKSLY 1300

[Close]

BLAST of Lag0007937 vs. NCBI nr
Match: KAA0054997.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 4.8e-38
Identity = 99/227 (43.61%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 367 VHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVP------TDPSSYFVASKYQEWRSA 426
           +H  A  +N H  QTR+K G  K K FV+   T +P       +PSSY  ASK   W++A
Sbjct: 33  MHTNAPIINAHPKQTRSKSGISKKKVFVA--ATHLPKNSVDENEPSSYTQASKDLVWQNA 92

Query: 427 MCEKFNALQEQ--------------------------------------VAKGFHQVEGF 486
           M E+++AL +Q                                      VAKG+HQ EG 
Sbjct: 93  MKEEYDALLKQGTWKLTSLPPNKPAIGCEWVYKIRRNPDGTITRHKARLVAKGYHQQEGI 152

Query: 487 DFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSS 546
           DF +TF P+VKKPT+R++L+LA H++W L QLDVKN FLH  L+++ +M QP GF+DK+ 
Sbjct: 153 DFEETFIPIVKKPTVRIVLSLATHFEWKLRQLDVKNSFLHGELREEVYMQQPQGFVDKTR 212

Query: 547 PHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR 549
           P+ V +L KSLYG KQAPRAWF+ FT++L TLGF AS+  +S L+ R
Sbjct: 213 PNLVCKLRKSLYGLKQAPRAWFECFTAHLLTLGFNASND-NSSLFVR 256

[Close]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 5.6e-29
Identity = 92/291 (31.62%), Postives = 134/291 (46.05%), Query Frame = 0


Query: 289  SESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSS 348
            + SS + S    T   P+            S SSPS  T  S+  T+ +P  IL   P  
Sbjct: 852  THSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPP 911

Query: 349  IADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVS-TMTTSVPTDPSS 408
            +A ++ +                + +N H M TRAK G  KP    S  ++ +  ++P +
Sbjct: 912  LAQIVNNNNQ-------------APLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRT 971

Query: 409  YFVASKYQEWRSAMCEKFNA---------------------------------------L 468
               A K + WR+AM  + NA                                        
Sbjct: 972  AIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYK 1031

Query: 469  QEQVAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK 528
               VAKG++Q  G D+++TF+PV+K  +IR++L +A    W + QLDV N FL   L   
Sbjct: 1032 ARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDD 1091

Query: 529  -FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS 539
             +MSQPPGF+DK  P++V +L K+LYG KQAPRAW+    +YL T+GF  S
Sbjct: 1092 VYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNS 1129

[Close]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.6e-28
Identity = 101/300 (33.67%), Postives = 140/300 (46.67%), Query Frame = 0


Query: 280  EPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQ 339
            +P +    NS S   ++P P +PS PN     + L  SP  SSP  PT  +++   +SP 
Sbjct: 823  QPHQTQNSNSNSPILNNPNPNSPS-PNSPNQNSPLPQSPI-SSPHIPTPSTSISEPNSPS 882

Query: 340  EILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTT 399
                 S S+    L         +  N   P   VN H M TRAK G  KP    S  T+
Sbjct: 883  -----SSSTSTPPLPPVLPAPPIIQVNAQAP---VNTHSMATRAKDGIRKPNQKYSYATS 942

Query: 400  -SVPTDPSSYFVASKYQEWRSAMCEKFNA------------------------------- 459
             +  ++P +   A K   WR AM  + NA                               
Sbjct: 943  LAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFN 1002

Query: 460  --------LQEQVAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNG 519
                        VAKG++Q  G D+++TF+PV+K  +IR++L +A    W + QLDV N 
Sbjct: 1003 SDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1062

Query: 520  FLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS 539
            FL   L  + +MSQPPGF+DK  P +V RL K++YG KQAPRAW+    +YL T+GF  S
Sbjct: 1063 FLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNS 1112

[Close]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-19
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 432 VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FM 491
           V KGF Q +G DF + F+PVVK  +IR IL+LAA     + QLDVK  FLH  L+++ +M
Sbjct: 879 VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 938

Query: 492 SQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYL 531
            QP GF      H V +L+KSLYG KQAPR W+ +F S++
Sbjct: 939 EQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFM 978

[Close]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-11
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 432  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FM 491
            VA+GF Q    D+ +TF PV +  + R IL+L   Y   + Q+DVK  FL+  LK++ +M
Sbjct: 959  VARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYM 1018

Query: 492  SQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASS 540
              P G    S   +V +L+K++YG KQA R WF+ F   L    F  SS
Sbjct: 1019 RLPQGISCNSD--NVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSS 1065

[Close]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 2.4e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI 39
           MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Sbjct: 79  MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 116

[Close]

BLAST of Lag0007937 vs. ExPASy TrEMBL
Match: A0A2N9FUJ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18717 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-46
Identity = 140/386 (36.27%), Postives = 187/386 (48.45%), Query Frame = 0


Query: 247  NKGIPPSHWP---------ERDFLFTGW------------TINRLFIRGALVLKEPEEVF 306
            N G+P +HWP             LF G+            T +R+++   ++  E E  F
Sbjct: 701  NAGLPITHWPYNTHKLQPRSTPCLFLGYPTYSKGYICLDPTTHRVYVSRHVLFNESE--F 760

Query: 307  LKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSP----SAPTQLSTVD-------- 366
            L +        P   T +  +   L  L HT   PS P    S+   +S+ D        
Sbjct: 761  LAHFSLPSQSPPTSVTSTFDSTPWLAILAHTCTPPSIPDSSHSSSVPISSTDPILQSTTP 820

Query: 367  ----TNSSPQEILHVSPSSIA---DLLADEQSHEH-----SVFQNVHIPASTVNNHLMQT 426
                + S P   +  SP        +L   QS        S     HIP S+ N H M T
Sbjct: 821  IVQFSGSVPTCAIPTSPPPSPPPNPILESIQSTAAALPILSSSSVPHIPPSSTNTHPMHT 880

Query: 427  RAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---------- 486
            R+K G FKPK F + +T    T+PS+Y  ASK+ +W +AM E+++ALQ Q          
Sbjct: 881  RSKNGIFKPKTFHTPITDYTQTEPSTYLTASKFPQWCTAMHEEYSALQRQHTWTLVPPPC 940

Query: 487  ----------------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILAL 546
                                        VAKGFHQ  G DF++TF+PVVK PT+R+ILAL
Sbjct: 941  GKNIVGCKWVFKLKRNSDGTISRYKARLVAKGFHQQHGIDFAETFSPVVKPPTVRLILAL 1000

Query: 547  AAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAW 549
            A  Y+W L QLDV N FLH  LK++ +M+QPPG+++   PHHV RLHKS+YG KQAPRAW
Sbjct: 1001 AVTYKWPLRQLDVSNAFLHGILKEEVYMAQPPGYVNPDQPHHVCRLHKSIYGLKQAPRAW 1060

[Close]

BLAST of Lag0007937 vs. ExPASy TrEMBL
Match: A0A5D3BLP0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00890 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-45
Identity = 110/205 (53.66%), Postives = 144/205 (70.24%), Query Frame = 0


Query: 317 SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVN 376
           SP P+ P+     S+  TN ++  + L+VS +       + ++  ++   N+H+P    N
Sbjct: 49  SPPPNPPAVDITYSSFITNTNATSQSLNVSST------VNIRNDINAATTNIHVPPPPRN 108

Query: 377 NHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---V 436
            H MQTR K G FKPKAF   +TT++PT P+SY  ASKY +W +AMCE+F+ALQ Q   +
Sbjct: 109 THTMQTREKSGIFKPKAF--HITTALPT-PTSYTEASKYPKWCTAMCEEFDALQAQARLI 168

Query: 437 AKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMS 496
           AKG+HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLHD L++  +MS
Sbjct: 169 AKGYHQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQLDVKNAFLHDILQETVYMS 228

Query: 497 QPPGFLDKSSPHHVFRLHKSLYGRK 517
           QP GF DK+ P+HV  LHKSLYG K
Sbjct: 229 QPIGFKDKTYPNHVCPLHKSLYGLK 244

[Close]

BLAST of Lag0007937 vs. ExPASy TrEMBL
Match: A0A2N9IR41 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54880 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-45
Identity = 130/289 (44.98%), Postives = 164/289 (56.75%), Query Frame = 0


Query: 296 SPKPAT-PSHPNITPLFTLLH-TSPSP-SSPSAPTQLSTVDTNS-SPQEILHVSPSSIAD 355
           SP+P T P  P+ +P     H T P P  +P  P  L+T    S S   IL VSP+    
Sbjct: 280 SPEPNTLPYSPHNSPHNPAPHLTQPGPLLNPIQPATLNTTQPASFSSPNILTVSPA---- 339

Query: 356 LLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTS-VPTDPSSYFV 415
            LA+    E++   N   PA +++ H MQTR+K G  K K+F ++ T   + T+P +Y +
Sbjct: 340 -LANP---ENTALANPENPAVSLSTHPMQTRSKSGISKKKSFATSTTMDYLQTEPPTYTI 399

Query: 416 ASKYQEWRSAMCEKFNALQEQ--------------------------------------V 475
           ASK+ +WR AM  +F ALQ Q                                      V
Sbjct: 400 ASKFPQWREAMASEFAALQRQHTWQLVPPSSDQNVVGCRWVYKIKRNSDGSVSRYKARLV 459

Query: 476 AKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMS 535
           AKGFHQ  G DF++TF+PVVK PT+R+IL+LAA  QWSL QLDV N FLH  LK+  FM+
Sbjct: 460 AKGFHQQAGVDFAETFSPVVKPPTVRIILSLAAQNQWSLRQLDVSNAFLHGLLKETVFMA 519

Query: 536 QPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSA 541
           QP GF+D S P HV  LHKSLYG KQAPRAWF+RFTS+L TLGF AS A
Sbjct: 520 QPLGFVDSSLPSHVCHLHKSLYGLKQAPRAWFERFTSHLMTLGFKASVA 560

[Close]

BLAST of Lag0007937 vs. ExPASy TrEMBL
Match: A0A2N9J6E3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60664 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-45
Identity = 130/338 (38.46%), Postives = 174/338 (51.48%), Query Frame = 0


Query: 266 TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSA 325
           T  R++I   ++  E E  FL +   S     +P T +  ++  L  ++HT  SP+  S+
Sbjct: 655 TTKRVYISRHVLFNESE--FLPDLSLSSTPQTEPVTSTFDSLPWLLVMMHTC-SPTLNSS 714

Query: 326 PTQLSTVDT-----------NSSPQEILHVSPSSIADLLADEQSHEHSV----FQNVHIP 385
            T L T++T             SP  IL  +  S +D +    S   S       +  IP
Sbjct: 715 STALETLETLPQSLIFPSSFVESPSPILSTNAVSNSDPIESHSSAASSAPESSLPSTSIP 774

Query: 386 -ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQ 445
               VN H M TR+K G FKPK F +T      T+P ++ +ASKY  W +AM E+F ALQ
Sbjct: 775 QPPVVNTHPMHTRSKHGIFKPKIFHTTTIDYTQTEPPTHQIASKYPHWCTAMDEEFTALQ 834

Query: 446 EQ--------------------------------------VAKGFHQVEGFDFSKTFNPV 505
            Q                                      VAKGFHQ  G DF +TF+PV
Sbjct: 835 RQQTWSLVPHPPGKNIVGYKWVFKLKRNSDGSISRYKARLVAKGFHQQHGIDFQETFSPV 894

Query: 506 VKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK 549
           VK PT+R+ILALA  Y W L QLDV+N FLH  LK++ +M+QPPG+++ S P HV +LHK
Sbjct: 895 VKPPTVRLILALAVTYHWPLRQLDVRNAFLHGVLKEEVYMTQPPGYVNPSLPQHVCQLHK 954

[Close]

BLAST of Lag0007937 vs. ExPASy TrEMBL
Match: A0A2N9IV19 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57128 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.8e-45
Identity = 130/338 (38.46%), Postives = 174/338 (51.48%), Query Frame = 0


Query: 266  TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSA 325
            T  R++I   ++  E E  FL +   S     +P T +  ++  L  ++HT  SP+  S+
Sbjct: 688  TTKRVYISRHVLFNESE--FLPDLSLSSTPQTEPVTSTFDSLPWLLVMMHTC-SPTLNSS 747

Query: 326  PTQLSTVDT-----------NSSPQEILHVSPSSIADLLADEQSHEHSV----FQNVHIP 385
             T L T++T             SP  IL  +  S +D +    S   S       +  IP
Sbjct: 748  STALETLETLPQSLIFPSSFVESPSPILSTNAVSNSDPIESHSSAASSAPESSLPSTSIP 807

Query: 386  -ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQ 445
                VN H M TR+K G FKPK F +T      T+P ++ +ASKY  W +AM E+F ALQ
Sbjct: 808  QPPVVNTHPMHTRSKHGIFKPKIFHTTTIDYTQTEPPTHQIASKYPHWCTAMDEEFTALQ 867

Query: 446  EQ--------------------------------------VAKGFHQVEGFDFSKTFNPV 505
             Q                                      VAKGFHQ  G DF +TF+PV
Sbjct: 868  RQQTWSLVPHPPGKNIVGCKWVFKLKRNSDGSISRYKARLVAKGFHQQHGIDFQETFSPV 927

Query: 506  VKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK 549
            VK PT+R+ILALA  Y W L QLDV+N FLH  LK++ +M+QPPG+++ S P HV +LHK
Sbjct: 928  VKPPTVRLILALAVTYHWPLRQLDVRNAFLHGVLKEEVYMTQPPGYVNPSLPQHVCQLHK 987

[Close]

BLAST of Lag0007937 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-20
Identity = 52/118 (44.07%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 432 VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FM 491
           VAKG+ Q EG DF +TF+PV K  ++++ILA++A Y ++L QLD+ N FL+  L ++ +M
Sbjct: 151 VAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYM 210

Query: 492 SQPPGFL----DKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSY 545
             PPG+     D   P+ V  L KS+YG KQA R WF +F+  L   GF  S + H+Y
Sbjct: 211 KLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268

[Close]

BLAST of Lag0007937 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI 39
           MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Sbjct: 79  MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 116

[Close]

BLAST of Lag0007937 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI 39
           MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Sbjct: 79  MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 116

[Close]

BLAST of Lag0007937 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI 39
           MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Sbjct: 79  MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 116

[Close]

BLAST of Lag0007937 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1   MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI 39
           MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Sbjct: 69  MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 106

The following BLAST results are available for this feature:

BLAST of Lag0007937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056830.1	1.2e-44	53.66	putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ99954.1 putative m...	[more]
XP_022158189.1	1.7e-43	42.86	uncharacterized protein LOC111024722 [Momordica charantia]	[more]
KAA0066360.1	6.5e-43	50.43	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK00923.1 putative m...	[more]
CCH50966.1	1.3e-38	36.12	T4.5 [Malus x robusta]	[more]
KAA0054997.1	4.8e-38	43.61	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0007937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	5.6e-29	31.62	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.6e-28	33.67	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.1e-19	50.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.1e-11	39.45	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P42795	2.4e-11	86.84	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]

BLAST of Lag0007937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9FUJ5	1.8e-46	36.27	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18717 PE=4 SV=1	[more]
A0A5D3BLP0	5.8e-45	53.66	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A2N9IR41	5.8e-45	44.98	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9J6E3	5.8e-45	38.46	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60664 PE=4 SV=1	[more]
A0A2N9IV19	5.8e-45	38.46	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57128 PE=4 SV=1	[more]

BLAST of Lag0007937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-20	44.07	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT2G42740.1	1.7e-12	86.84	ribosomal protein large subunit 16A	[more]
AT3G58700.1	1.7e-12	86.84	Ribosomal L5P family protein	[more]
AT4G18730.1	1.7e-12	86.84	ribosomal protein L16B	[more]
AT5G45775.1	1.7e-12	86.84	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 431..548 e-value: 1.5E-29 score: 103.3
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 94..134 e-value: 4.3E-10 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..338
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 312..538
None	No IPR available	PANTHER	PTHR11439:SF331	SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED	coord: 312..538
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 428..536
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 93..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007937.1	Lag0007937.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046983	protein dimerization activity