Lag0003032.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0003032.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Nuclear pore complex protein NUP35
Location	chr4: 47501854 .. 47503937 (-)
Sequence length	927
RNA-Seq Expression	Lag0003032.1
Synteny	Lag0003032.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGAGGAAAGGGAAGTTCTCAACTCCGGGCCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAATCTGGAATTCCTGATTTTCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAATTGCCAGCACTTCGTACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAACCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTACAGGAAAACTCAATGAGGAATGGGTGACTGTCTATGGGTGAGTTCTCTATTTCCTTTCCCCCTCTCATTCATCATTGTTAGCTGAGATCTTTGTAGTGGGTTGAAATTTGAATGATTCATTTACCATCTTTGACTCGTTATGTCTAATTGATTACAGATATTTTATCTACATTTCAAACGGCCTACCATTTTTCTTTTGTGTCATCTTTGCATCATGATGCTGATGATCAAATTGGTTTAATTTTATATGGTTTATGTAGTCTTGCCTTGCCATTTCCCTTGGATGCATCTCTCTCTTACACGCACCCACACTCTACTCCTGCACACGATAGCATATTCATGTATAGAACATTGCTTCAATCAATCACTTTGACATTAAACATCTTCTATTTGGAAGTGGTGTAAGTCTGTCCTTTTACCTTAGCTTCTTTGTTGTTGAAATGAATGAGTATGCTTCAATTTGTTGACATGTAAGGAAGTACCCTAGCTGCTTTAGATTTACCCTAATGGCAGTGCTGTTGTAAGCTATTGCAGTTATGTTGATTATGATATGAGCAATTTAAATTGAAAAATGCCCTCTTTCTTCAGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGGTACCAATCTACCTCTGCTTACCTGCTTTATTTCACCATGGCTTTCTCGGTTTGATGTTCTTTTTCATTTAGACTCTTCCAGGCAATGTATTATTTGAGATTGGAATGGATTTGTTGCTTGCTAGTTAGTAAAATTTTGGGAACATGAGAATTATTTATTATGGAAATAAATCTGCAAAATGTATTCTAGTTTTGCCAGTAAAGGTACTAGGTTTTAAGGTTCTTCTTTTCTTTGTTCAACCATATCAAGGTTAGGGATACAAACCTCCTACCTTTTGGTCGAAGACAAGATGTCTTATCCAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAGATTTAATTGACACGTGCCGAGTGTTTTGTTTGAATATTAACCTCATCAAATCAACAGATAATGTTTGATCATTAGAAAGACATTTATTATATTGAGTATATGTAACTGATATGATATCTATATATGAACGAACAGGAAGATGCTATATTCAACCTCTTAGAAAAATTGTTTGCATTATGAATATGTTGTTTCATTTGTTGCTGGTGCAGAACCGATCTGATGCGCACAAGGCTCTCAACAAAATGGTATTCAAATTAATGGGGTGCTGATTGTTGGTGTGAAACCAGTGGACCCAATGCACCGGCAGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG

mRNA sequence

ATGAACTCCACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGAGGAAAGGGAAGTTCTCAACTCCGGGCCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAATCTGGAATTCCTGATTTTCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAATTGCCAGCACTTCGTACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAACCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTACAGGAAAACTCAATGAGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCGCACAAGGCTCTCAACAAAATGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG

Coding sequence (CDS)

ATGAACTCCACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACCACGAGGAAAGGGAAGTTCTCAACTCCGGGCCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCGGGCTCAGATTTCTCTCCTGAATCTGGAATTCCTGATTTTCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATCCAAAGTCACGATTTCTCTTCGCCGATGAAAAATAAGTCAATTGCCAGCACTTCGTACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCGACATCAAAAGGTGTTAGCACTGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCGTTAATCACACTTCCAACCCCGAGGGAAGTTGCAAGACCGGAGGTGCAGAGGAATTGCTTGCCTACAGGAAAACTCAATGAGGAATGGGTGACTGTCTATGGATTCTCCCCTGCTGATACAAATCTGGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCGCACAAGGCTCTCAACAAAATGACACTAGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACTTGCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCAAAATCATTAGTGTCTAAGGTCATGGATTTGATGTTTGGAGTCTAG

Protein sequence

MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV

Homology

[Close]

BLAST of Lag0003032.1 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida])

HSP 1 Score: 569.3 bits (1466), Expect = 2.0e-158
Identity = 288/330 (87.27%), Postives = 297/330 (90.00%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+ VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTIVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRSGSDFSPESGI D+P+SPEIKSDPRTPIQSHDFSSP+KNKS ASTSYTPISGQQS
Sbjct: 61  TLEDRSGSDFSPESGIADYPVSPEIKSDPRTPIQSHDFSSPLKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEKLN+PGFMV PPVSSRTSELLATRGL RPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNHPGFMVTPPVSSRTSELLATRGLVRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSSARQSGGTIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 282/330 (85.45%), Postives = 292/330 (88.48%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDR  SDFSPESGIPD+PLSPEIKSDPRTPIQSHDFSSPMKNKS ASTSYTP SGQQS
Sbjct: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P G
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAG 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Sbjct: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of Lag0003032.1 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 8.1e-152
Identity = 278/330 (84.24%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa])

HSP 1 Score: 545.0 bits (1403), Expect = 4.0e-151
Identity = 276/330 (83.64%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo])

HSP 1 Score: 542.3 bits (1396), Expect = 2.6e-150
Identity = 275/330 (83.33%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.1e-110
Identity = 215/334 (64.37%), Postives = 251/334 (75.15%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDFSSPMKNKSIASTSYTPISGQ 120
           TL+DR  SDFSPESGI D+  SP+ KSD RTP QS   +  +P K K  AS S++ ++ Q
Sbjct: 61  TLDDR--SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCL 180
           QS+Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PTGKLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKA 240
           PTG L+ EEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN 300
           LN                     K  L+E+LNN GFM +PP SS  +     R L+RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQY 300

Query: 301 LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV 309
           LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.5e-12
Identity = 90/346 (26.01%), Postives = 136/346 (39.31%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPP 60
           + S     P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP
Sbjct: 16  LGSPTSPKPSAGAQFLPGFLLGDIPTPV--------TPQQRPSIGVMEMRSPLLSGGSPP 75

Query: 61  PPVF-TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFS---SPMKNKSIASTSY 120
            PV  T +D+SG+   P   I D   SP + S P  P ++  FS   +P+     +S   
Sbjct: 76  QPVVPTHKDKSGA--PPVRSIYDDIASPGLGSTPLNPRKTASFSVLHTPLSGVIPSSPEC 135

Query: 121 TPISGQQSRQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEV 180
             ISG + R  S+ F+  +      T              + P  +    T  +    + 
Sbjct: 136 KNISGSRKRPASSVFSPATIGHSRKT-------------TLSPAQMDPFYTQGDALTSDD 195

Query: 181 QRNCLPTGKLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSD 240
           Q        L++ WVTV+GF  A  + +L +F + G I+KHV    + NWMHI YQ++  
Sbjct: 196 Q--------LDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQ 255

Query: 241 AHKALNK---------------------MTLDEKLNNP--GFMVIPPV--------SSRT 300
           A KAL+K                     M   EK++ P    +  PPV        S  T
Sbjct: 256 ARKALSKDGRIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGT 315

Query: 301 SELLATRGLARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG 308
               + R LA  Y           +        +S+VSK M+ MFG
Sbjct: 316 PRAASMRPLAATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329

[Close]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-10
Identity = 82/319 (25.71%), Postives = 119/319 (37.30%), Query Frame = 0


Query: 20  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDF 79
           DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSIS--GPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGA--PPVRSIYDD 101

Query: 80  PLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQSRQGSAGFNWWSTSKGVSTE 139
             SP + S P T           + +   S   +P+ G  S  G+    +   S G    
Sbjct: 102 ISSPGLGSTPLT----------SRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIG---- 161

Query: 140 QEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLNEEWVTVYGFSPADTNL 199
                   P +  + P  L    T  +    E          L++ WVTV+GF  A  + 
Sbjct: 162 -------QPRKTTLSPAQLDPFYTQGDSLTSE--------DHLDDSWVTVFGFPQASASY 221

Query: 200 VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK-------------------- 259
           +L +F + G ILKHV      NWMHI YQ++  A KAL+K                    
Sbjct: 222 ILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKS 281

Query: 260 -MTLDEK--LNNPGFMVIPPVSS--------RTSELLATRGLARPYNLQNGNSNARQSGG 308
            M   ++  L++P     PP+ +         T  +   R LA  Y     +        
Sbjct: 282 VMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQ 325

[Close]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 91/331 (27.49%), Postives = 133/331 (40.18%), Query Frame = 0


Query: 8   TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLED 67
           +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D
Sbjct: 17  SPKPGAQFLPGFLMGDLPAPVTPQPRSFGLTGGAEIRSPL----LAGGSPPQPVVPTPKD 76

Query: 68  RSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPM-KNKSIASTSYTPISGQQSRQG 127
           +SG              +P ++S       S    SP+   K   +  +TP+SG Q   G
Sbjct: 77  KSG--------------APPVRSIYDDLNGSAVGMSPLAARKQPFAGVHTPLSGLQGTPG 136

Query: 128 SAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTGKLN 187
           +   N++S        Q+ K   SP +  + P       T  +    E Q        L+
Sbjct: 137 TVS-NFFS-----PVSQQRKTTLSPAQ--VDP-----FFTQGDALSSEDQ--------LD 196

Query: 188 EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK---- 247
           + W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A KAL+K    
Sbjct: 197 DTWITVFGFPPASASYILLQFAQYGNILKHVMS-NTGNWMHVQYQSKLQARKALSKDGKI 256

Query: 248 -----------------MTLDEKLNNPGFMVIPPVS---SRTSELLATRGLARPYN-LQN 307
                            M   +K +    +  PPV    + +  L   R + RP +    
Sbjct: 257 FGEAIMIGVKPCIDKSVMESLDKGSTSSSVFTPPVKAPCTPSHPLSTPRSVMRPLSAAYK 307

[Close]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot
Match: Q9VWS2 (Nucleoporin Nup35 OS=Drosophila melanogaster OX=7227 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.7e-09
Identity = 41/149 (27.52%), Postives = 70/149 (46.98%), Query Frame = 0


Query: 181 KLNEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKM 240
           +L++ WVT++GF P   ++VL+ F  CG I+  V  P++ NWM++ Y +R ++ KALN  
Sbjct: 187 RLSDFWVTIFGFPPGAGSMVLQHFTVCGTIVDVVHAPQNGNWMYVRYSSRIESDKALN-- 246

Query: 241 TLDEKLNNPGFMV------------------IPPVSSRTSELLATRGLARPYNLQN---- 300
             +EK+     MV                  +P  ++   +   +    RP++ Q+    
Sbjct: 247 -YNEKIIAGNVMVGVSRCTDRSVIDKENIGSVP--NAEIGDPPTSPSAIRPFSQQSYKLA 306

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFG 308
              N       +   S  L+ K MDL+FG
Sbjct: 307 RKDNIISPQKDVPQKSSGLMDKAMDLIFG 330

[Close]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.5e-155
Identity = 282/330 (85.45%), Postives = 292/330 (88.48%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDR  SDFSPESGIPD+PLSPEIKSDPRTPIQSHDFSSPMKNKS ASTSYTP SGQQS
Sbjct: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +EQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC P G
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAG 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEK+NNPGFMVIPPV SRT+ELLATRG  R YNLQN
Sbjct: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GNSNARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.9e-152
Identity = 278/330 (84.24%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPISGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  L+E+LNNPGFMVIPPVSSRTSELLATRG  RPYNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.0e-151
Identity = 276/330 (83.64%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEKLNNPGFMVIPPVSSRTSELLATRG  RPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 275/330 (83.33%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRS SDFSPESGIPD+P+SPE KSDPRTPI+ HDFSSP KNKS ASTSYTPI+GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQGSAGF+WWSTSKG  +E+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                  LDEKLNNPGFMVIPPVSSRTSELLATRG   PY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 309
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.9e-149
Identity = 274/331 (82.78%), Postives = 288/331 (87.01%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MN+TVHRT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQSHDFSSPMKNKSIASTSYTPISGQQS 120
           TLEDRSGSDFSPESGIPD+P+SPE+KSDP TPIQSHDFSSPMK+KS ASTS+TPIS QQS
Sbjct: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISAQQS 120

Query: 121 RQGSAGFNWWSTSKGVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPTG 180
           RQ SAGF+WWST KG  +EQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLP G
Sbjct: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180

Query: 181 KLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLN EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240

Query: 241 ---------------------MTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYNLQN 300
                                 TLDEKLNNPGFMV+PPVSSRT+EL    G  RPYN QN
Sbjct: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300

Query: 301 GNSNARQSGG-TIASPSKSLVSKVMDLMFGV 309
           GNS ARQSGG TIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 331

[Close]

BLAST of Lag0003032.1 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein )

HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-111
Identity = 215/334 (64.37%), Postives = 251/334 (75.15%), Query Frame = 0


Query: 1   MNSTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M++  HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSGSDFSPESGIPDFPLSPEIKSDPRTPIQS--HDFSSPMKNKSIASTSYTPISGQ 120
           TL+DR  SDFSPESGI D+  SP+ KSD RTP QS   +  +P K K  AS S++ ++ Q
Sbjct: 61  TLDDR--SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQ 120

Query: 121 QSRQGSAGFNWWSTSK-GVSTEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCL 180
           QS+Q S   +WWS SK G STEQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +
Sbjct: 121 QSQQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQII 180

Query: 181 PTGKLN-EEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKA 240
           PTG L+ EEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKA
Sbjct: 181 PTGNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKA 240

Query: 241 LN---------------------KMTLDEKLNNPGFMVIPPVSSRTSELLATRGLARPYN 300
           LN                     K  L+E+LNN GFM +PP SS  +     R L+RP  
Sbjct: 241 LNKAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQY 300

Query: 301 LQNGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV 309
           LQNG++ + Q SGG +ASPSKS+VSK  DLMFGV
Sbjct: 301 LQNGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

The following BLAST results are available for this feature:

BLAST of Lag0003032.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900103.1	2.0e-158	87.27	nuclear pore complex protein NUP35 [Benincasa hispida]	[more]
XP_022151212.1	1.3e-154	85.45	nuclear pore complex protein NUP35 [Momordica charantia]	[more]
XP_004141656.1	8.1e-152	84.24	nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical pr...	[more]
KAA0051033.1	4.0e-151	83.64	nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclea...	[more]
XP_008462444.1	2.6e-150	83.33	PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]	[more]

BLAST of Lag0003032.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04326	2.1e-110	64.37	Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1...	[more]
Q66IJ0	4.5e-12	26.01	Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1	[more]
Q8NFH5	1.9e-10	25.71	Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1	[more]
Q6P6X9	2.5e-10	27.49	Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1	[more]
Q9VWS2	4.7e-09	27.52	Nucleoporin Nup35 OS=Drosophila melanogaster OX=7227 GN=Nup35 PE=1 SV=1	[more]

BLAST of Lag0003032.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCV4	6.5e-155	85.45	Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC11101918...	[more]
A0A0A0K7B2	3.9e-152	84.24	Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE...	[more]
A0A5A7U592	2.0e-151	83.64	Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CH09	1.3e-150	83.33	Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 ...	[more]
A0A6J1JYW9	6.9e-149	82.78	Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 P...	[more]

BLAST of Lag0003032.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16310.1	1.5e-111	64.37	mitotic phosphoprotein N' end (MPPN) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017389	Nucleoporin, NUP53	PIRSF	PIRSF038119	NUP53	coord: 238..308 e-value: 2.3E-13 score: 48.6 coord: 3..241 e-value: 6.5E-68 score: 227.9
IPR017389	Nucleoporin, NUP53	PANTHER	PTHR21527	NUCLEOPORIN NUP35	coord: 1..239 coord: 247..308
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PFAM	PF05172	Nup35_RRM	coord: 182..239 e-value: 1.8E-17 score: 63.2
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PROSITE	PS51472	RRM_NUP35	coord: 181..264 score: 22.013142
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 180..252 e-value: 1.5E-21 score: 78.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..150
None	No IPR available	CDD	cd12441	RRM_Nup53_like	coord: 184..253 e-value: 5.96317E-28 score: 101.534
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 183..245

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0003032	Lag0003032	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0003032.1.exon4	Lag0003032.1.exon4	exon
Lag0003032.1.exon3	Lag0003032.1.exon3	exon
Lag0003032.1.exon2	Lag0003032.1.exon2	exon
Lag0003032.1.exon1	Lag0003032.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0003032.1	cds.Lag0003032.1_4	CDS
cds.Lag0003032.1	cds.Lag0003032.1_3	CDS
cds.Lag0003032.1	cds.Lag0003032.1_2	CDS
cds.Lag0003032.1	cds.Lag0003032.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0003032.1	Lag0003032.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0006607	NLS-bearing protein import into nucleus
biological_process	GO:0006999	nuclear pore organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0044613	nuclear pore central transport channel
cellular_component	GO:0044615	nuclear pore nuclear basket
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0017056	structural constituent of nuclear pore
molecular_function	GO:0005543	phospholipid binding
molecular_function	GO:0003697	single-stranded DNA binding