Lag0001499 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001499
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ATP synthase subunit e, mitochondrial
Location	chr4: 32043960 .. 32048236 (-)
RNA-Seq Expression	Lag0001499
Synteny	Lag0001499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGCGTGAGAGAAGAAGAAGATGAAAAATGGGTAATCGGCGTGACAACCGTGAGAGAAGAAGAAGATGAAAAATGGGTTCGACGTGATGGTCGTACAGTTGGCGTGAGAGAAAAGGAAGATGAAAATGGGTAATCGACTTGACAACCGTGAGAGAAGAAGAAGATGAAAAATGGGTAATCGGCGTGTACGGTTGGCATGAGAGAAGAAGAAGATGAAAAATGGATAATCGATGAAGAAGAAGATGAAAAATGGGTAATCGGTGTGTGTGACATTAAATTATAAGAGTTGTTAGAATTGTACTTACAAACTTCCAATTTCATTAACCATCTTCTGCATTTATGAAATTTTACTATTAAACCCTTAAATATTGCAATGTATAAATTATCTCTAAACTATTAGGATTTTTACCATTTAACTCTTGAATTATTGAGTTGTTACAGTTTAACCAGTTTTTTAATTTTATAAAATTTGAAAAGTTTGCTATTAACCATAATTTTTTTTTATTATTATTATAATAAATTAACCATAAAAGTTTTTTTTATTATTATTATAATAAATTAACCATAAAAGTTTTTTTTATTATTATTATAATAAATTAACCATAAAAGCTTTTATACTAATATTGAGTTGCGATATAGACTTAAAAAAAAAAAAAAAACTCTTATAATTTGGGATTGAGTATAACAATTTTAAAATTCAAAGATTTAATTAGAAGTTAGAACAACCTTATAATGCAGGGATCATTTGTGAATTTTGCCACTTTTAAAAGTTTAATTGCAACAATTTTATTCGTGTAACCACTCCTATTATCAATAAGACAATCTGTATTGTAGAAAAAAAAACTAAATTAAAAAAATACTCTTAAACTATGAAATTTGTTTAAAAAATGCCTCTAAACTTTGAAAAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAATACCCTTGAACTTTGAAAAATGTTTTCAAAATACACTTGTCGTTAAATTTTGGATGGAAACCGTTAAAGTTTCAGTTTCAAAAATATTCTTGAACTTTCAAAAAATTTAAAAAATACCCTTATTGAAAAATGCTTCTTCTTTTTTCCTCATCTCACCGTAAATTCTAACGGTTTCTATCCAAAAATTAACAACAAGAGTAATTTTGAAACATTTTTCAAAGTTTATGGGTATTTTTGAAATTTTTCAAAGTTCAGGGACATTTTTTAAACAAACTCCATAGTTCAAGAGTATTTTTTTTTTTTAATAAATTTAGCCCAAAAAAAAAAAAAAAAAAGAAATTAAGGCAATCTCATGTGCAACAGGGCGCAGTGGATTAAACCCTGGACGGTCAGTGAAGAAAGTCAGAGCTGTTTAATCTCCAGAGTCGAACCTCCAAACTCCTAGGGCTCATCTTTTCTCAAAATCGGCTTCTGGTTCTTAGGGAACTCTTTCTTCTTCTCTATTTGCTCTCGAAAAATCCTTACATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTTGTACGTTTTCTTTAGCTTTCCGATCGATTTCCTTGAAAATTTTGGACAGGAGATTTGTTAGAATTTCGCATGTTCAAAATGCTATATGTGGAATCTGATTTTAGATTCAGTAATTGGGGGAAAAAATAAATACTCAAATTCAATGATTTTGATCCTTTGCAGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTTAAATACCTTCAGGTTTGTTGCTTCCGTTTCCTTCTTTTCGTACTGTTTAGTTTTCTGCTGCCAAACTTAGGCTCATTGGCTTCGGATTGCTGGTTCTGGCTTGAATGTTAGTATCCCTATATTCTCATTTCTGATTTCTCATCCCTGCCAAGAGTGTCGTAGTATGTTATCCATTCTAGATGTAGAATATTCTTTTAAGTGCATATGTGTTTTTTGGGTCAAAATTTCTTGAAAACTACTATGTTATCCATCAAATACTTATTCATTTTCAGTCTGAATGTTTTTTCTAGGCTAAGTTATTCAAAATGCCCCTAAGCTTTGAGATCAGTTCCAATTATATCCTTATCGCTGAAAAAGTTTCACTTTTACCCTTACCTTTAAATTGATTCGAATATGCACTTGAACAATTTTATGTTTAAAACAAGTTATGAAAATTGAGGTGGCTGCTTAGTTGTAAATGTAGTAATGGTAGACATGAATTTTAAAAAATGAATGGAAAATGTGACAAGTATTGATAAGCGATAACCATGTCATTGATAACCGCTGGGTAATCATTGATGTGGGGGTGGTTTAAGAAATGAAGGGCAAAAGTAGCTTGAAAAGTGATTGTCATGTTATCGATACTTGCCCTATTTGCCAGTACGCACTTCAAATTCATCACAACAGTAAAATTTTTCAGGGGCATTTTCAAATCAATTTTAAAGGTCAAGGATAAATGTGAAACTTTTTAAACACTAAGGGTATCATTGAAACTAATCTCAAAATTCAGGGGCATTTTGAATCGTTTAGCCTTTTTCAATTAAGAAAGTAGAGTAGAAAAGTGAAGGGGGAGAGGATTTCCTGTTGTGTGAAGGGAATTAGAAAATGAACCATCCAATTGACTTGAATATCAAAAGAGGAATAATTACAGAACTTCCTGGGAAGAATAGACTGTCTGAAAACCAAAAGATAACGCCATCAATTGTCTCTAGCAGATTTGATAAGTTCTATTCAACAATTTGCTGAATTCTTTCCCCTTCCATCATGATGTCCCAAAGCATCACTTACTCTTGTTTAAGAAACCCATACTTTGAATACATAAGTTCCATAAAGTAGAAACAGAAGCGCATGATAATGGAAAAAGGTGATTTAAAGTCTCCATCTCTAATTGATGAAGAAGGCATTAAGAAGGTGATAAAGATGAGTTTGGGAATTTTCTTGTATTTTCTCCCAAGTCCGTGCCTTGCTATGGAAGGAGAGTCCCATAAAAGGAAAAAAAGCATCTAAATTTCTTATGGATCATTTCCATTTCAAGTGCCTGATAAATATAGTTATTTTTTTTTTTTTAAAATGTCTAGTCTTCGTGAAATTAGCTAAACAAAAAGTTCTGGTCTAGAATATTGATTCCTTAGAAATTAGGATTTTCATTGTTATACCTATTATATATGATGCAGTTGATGTGTTTTCTGATTTCCATATTTTGTTTTGTTGTTTATTCTGATTATTTCATAACAGATTATCATCAATTTTATCATTTTGAAAGTTAAATTTTAAACATTTTTCTTGAAGCAACTATTTATGTTTTACAACATAATTGTTAAATATATTAAATTAGATTGATGGTCTAAAGTTATGAAAGGGTCAATTGTTTTTAATGGTCTGTTGGATTTCTTTTAACTCGATGGATTAATTGAGTTGGATTGAAAATGATATTGGAAGGACCCAATTTTTGAAGTTAAAACATAAGAGTTTGGTTTTTGAAACGTTGTAAAAAATGCTTGAAATAAACTGTGCTTGGTCTTGGACTATATTTATTATTTTCCATTAATATACTCAATGATGACCAGTGTTTTATACTTCTAATTTTAACCAATTGGAGATCCAAATTCAAGTTTATTTCAACTTGACGTGATAGAGTAGCTAGCCACCCAACATGTTATATGCTATTTTTAAGTTTAAATGTCGTTAACTTATCAAACTTAACTGTGGGATTGTTAGTCACGAGTCATGACTTGTGCACATTTGAAGAGCGAGTGCAAATAAATTATTTGATGATTCACCATTTGACTTGGTAAAGGGCTTTATTAGTTTCTATTTGGATGTTGTTTTCAATCCATTTGGTGTAGCATCTATGTATGTTGCTGGTGTTTTTTCTGATGTGATGTGAACTTCCTTTATATATATATATATATAGGGAAGGTAAAGGGGATGGGTTCTGCCGTATGAACATGAACAGTCCAATAGGTCGTACATATGTTACCTTGAGTTCTAAGAGGAAGAGGATAGCTATAGGCCCATGGGCATTCCTCAGTTTAACTTATAAGTTATAATCATTATTATTTTAAAATCTCATGTTATTTGTGGCCCTCTTTTGAGGCTATTCTAAATGCACCTGTCTGATTCTAAAATTATACTTCAATCCGTCTTTAAACACCACAGGCGAAGGCAAAATCTCACCAGAAAGCTGAAGCAAAGGCTCATCACTGA

mRNA sequence

ATGGTTGGCGTGAGAGAAGAAGAAGATGAAAAATGGGTAATCGGCGTGACAACCGTGAGAGAAGAAGAAGATGAAAAATGGGTTCGACGTGATGGTCGTACAGTTGGCGTGAGAGAAAAGGAAGATGAAAATGGGGAACTCTTTCTTCTTCTCTATTTGCTCTCGAAAAATCCTTACATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTTGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTTAAATACCTTCAGGCGAAGGCAAAATCTCACCAGAAAGCTGAAGCAAAGGCTCATCACTGA

Coding sequence (CDS)

ATGGTTGGCGTGAGAGAAGAAGAAGATGAAAAATGGGTAATCGGCGTGACAACCGTGAGAGAAGAAGAAGATGAAAAATGGGTTCGACGTGATGGTCGTACAGTTGGCGTGAGAGAAAAGGAAGATGAAAATGGGGAACTCTTTCTTCTTCTCTATTTGCTCTCGAAAAATCCTTACATGGCGCTTCCTCCAGGGCCCTATTCTGGAACCAGCACCCTCGCTTTTGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTTAAATACCTTCAGGCGAAGGCAAAATCTCACCAGAAAGCTGAAGCAAAGGCTCATCACTGA

Protein sequence

MVGVREEEDEKWVIGVTTVREEEDEKWVRRDGRTVGVREKEDENGELFLLLYLLSKNPYMALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH

Homology

[Close]

BLAST of Lag0001499 vs. NCBI nr
Match: XP_038887516.1 (uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetical protein Csa_020535 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 60  MALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH 113
           MALPPGPYSGTSTLA VARASAFSVGLVYGSLKLKYLQAKAKSH+KAEAKAHH
Sbjct: 1   MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of Lag0001499 vs. NCBI nr
Match: KAG7022252.1 (hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 60  MALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH 113
           MALPPGPYSG+STLA VARASAFSVGLVYGSLKLKYLQAKAKSH+KAEAKAHH
Sbjct: 1   MALPPGPYSGSSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of Lag0001499 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata])

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 60  MALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH 113
           M LPPGPYSGTSTLA VARASAFSVGLVYGSLKLKYLQAKAKSH+KAEAKAHH
Sbjct: 1   MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of Lag0001499 vs. NCBI nr
Match: KAF4388402.1 (hypothetical protein G4B88_013239 [Cannabis sativa])

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 60  MALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH 113
           MA PPGPYSGTSTLA VARASAFS+GLVYGSLKLKYLQAKAKSH+KAEAKAHH
Sbjct: 42  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of Lag0001499 vs. NCBI nr
Match: XP_030478880.1 (uncharacterized protein LOC115695925 [Cannabis sativa])

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 60  MALPPGPYSGTSTLAFVARASAFSVGLVYGSLKLKYLQAKAKSHQKAEAKAHH 113
           MA PPGPYSGTSTLA VARASAFS+GLVYGSLKLKYLQAKAKSH+KAEAKAHH
Sbjct: 1   MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

The following BLAST results are available for this feature:

BLAST of Lag0001499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887516.1	2.1e-17	96.23	uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetica...	[more]
KAG7022252.1	6.2e-17	94.34	hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022952755.1	6.2e-17	94.34	uncharacterized protein LOC111455357 [Cucurbita moschata]	[more]
KAF4388402.1	1.8e-16	92.45	hypothetical protein G4B88_013239 [Cannabis sativa]	[more]
XP_030478880.1	1.8e-16	92.45	uncharacterized protein LOC115695925 [Cannabis sativa]	[more]

BLAST of Lag0001499 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36028	OSJNBB0050O03.8 PROTEIN	coord: 60..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001499.1	Lag0001499.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity