Lag0000724 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGGGCATCCTATCGCAAAAGACATGCGTAACAAGCCTTTCCTGCATTTCGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACAGGGAAGGTGTCGGAGGTGATGGGCGAGATGGGATCCAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCCAGAGAACGACACCCACATCCCACCGTTCACCATGCCTATTGCGAACATGTCAGAGGATGAACCTTGGGATACGCCAAACAGTCAAACTTGCCCAACAGGAAGGCCGTCACATGGGAGCAAGAGGAAGAGGTCTGGGTCTGACACGCACATAGCAGAAATTGTCACCTCATTTACAGAGCAACTGAAGTCAATTGCAGAGTGGTCGAAAGAAAAACGTGCCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGATGGAGGTACCAGAATTGGATAACCGAAAGAGGGTGAAGCTCATGGATATCCTTTTCAATAACATGAAAGCGACAGAGAGCTTCTTCTCCATTCCGGTTGCTCTGAAGTTGGAGTATTGTGAACTCCTCCTGGACAAACTCGGCTGA ATGCAAGGGCATCCTATCGCAAAAGACATGCGTAACAAGCCTTTCCTGCATTTCGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACAGGGAAGGTGTCGGAGGTGATGGGCGAGATGGGATCCAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCCAGAGAACGACACCCACATCCCACCGTTCACCATGCCTATTGCGAACATGTCAGAGGATGAACCTTGGGATACGCCAAACAGTCAAACTTGCCCAACAGGAAGGCCGTCACATGGGAGCAAGAGGAAGAGGTCTGGGTCTGACACGCACATAGCAGAAATTGTCACCTCATTTACAGAGCAACTGAAGTCAATTGCAGAGTGGTCGAAAGAAAAACGTGCCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGATGGAGGTACCAGAATTGGATAACCGAAAGAGGGTGAAGCTCATGGATATCCTTTTCAATAACATGAAAGCGACAGAGAGCTTCTTCTCCATTCCGGTTGCTCTGAAGTTGGAGTATTGTGAACTCCTCCTGGACAAACTCGGCTGA ATGCAAGGGCATCCTATCGCAAAAGACATGCGTAACAAGCCTTTCCTGCATTTCGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACAGGGAAGGTGTCGGAGGTGATGGGCGAGATGGGATCCAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCCAGAGAACGACACCCACATCCCACCGTTCACCATGCCTATTGCGAACATGTCAGAGGATGAACCTTGGGATACGCCAAACAGTCAAACTTGCCCAACAGGAAGGCCGTCACATGGGAGCAAGAGGAAGAGGTCTGGGTCTGACACGCACATAGCAGAAATTGTCACCTCATTTACAGAGCAACTGAAGTCAATTGCAGAGTGGTCGAAAGAAAAACGTGCCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGATGGAGGTACCAGAATTGGATAACCGAAAGAGGGTGAAGCTCATGGATATCCTTTTCAATAACATGAAAGCGACAGAGAGCTTCTTCTCCATTCCGGTTGCTCTGAAGTTGGAGTATTGTGAACTCCTCCTGGACAAACTCGGCTGA MQGHPIAKDMRNKPFLHFEDLAYVFGKDRATGKVSEVMGEMGSNMPDDEVDLSASPENDTHIPPFTMPIANMSEDEPWDTPNSQTCPTGRPSHGSKRKRSGSDTHIAEIVTSFTEQLKSIAEWSKEKRATEADFRDKIVTHLMEVPELDNRKRVKLMDILFNNMKATESFFSIPVALKLEYCELLLDKLG Homology
BLAST of Lag0000724 vs. NCBI nr
Match: XP_038899283.1 (uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899284.1 uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899285.1 uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899286.1 uncharacterized protein LOC120086622 [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 7.0e-29 Identity = 76/190 (40.00%), Postives = 117/190 (61.58%), Query Frame = 0
BLAST of Lag0000724 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28 Identity = 82/196 (41.84%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of Lag0000724 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-27 Identity = 82/193 (42.49%), Postives = 112/193 (58.03%), Query Frame = 0
BLAST of Lag0000724 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 131.3 bits (329), Expect = 8.6e-27 Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 0
BLAST of Lag0000724 vs. NCBI nr
Match: KAA0046928.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-26 Identity = 76/190 (40.00%), Postives = 104/190 (54.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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