Lag0000511.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0000511.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr4: 9290987 .. 9293925 (-)
Sequence length750
RNA-Seq ExpressionLag0000511.1
SyntenyLag0000511.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACAGTGAGGGGAGTGCAACTACTAGGCTATAGTGGAGTGACCCGGTAGTTAACGAATGTTGGTTAACTAGGTTAAAAGAGTTTGGCCGTTTAAACCTCGAATCGTTGGAGCCCATGATCTGTAGGTCCATTAGGTCTCCTTGCCAGCTTAAGGAATAAACTTTGGAACAATATGATGGAAAGAATTCAAATTGTTCAAATTCAGTTTAGGGAATATATCGGTCGTATTGGATATTATCGACACGTCGGGTTTTTGTTAAACCTAATTTTGAGAGTTTGACATATTTAAATATGATTTAAATATCGAGCACGTGAATAAGAATTCATGTTTGAGAAATTGAATTTCGAAAATGATTGGGATTGGTAGCAAAATATTAATTTAATAGTGGATATTAAATTAATATATAATTATATAATTTATTATTTAATCAATAATTATTTTAAATTAATTATGAATTAATTTAAAATTGAAAAGGGAAAAATACACTTTTGGTCCCTGAGATTTGGGTTAAGTTACACTTTGGTCCCTGAGTTTTAAAACTCGACAATTTAATCCCTAAGGTTTGGATTTCGTTATGCTTTTAGTCCCTCCGTTAATTTTTCTGTCAAATACTAACAGATTGCTGACGTGGCATTAGTTTATTAAAAATATATATATATTTTATTAATTTTTAAAATAACAAATACATTAAATATATTTTTATTCTTTATTATTTTTCTTTTATTTTTATTTTCTTTTCTTCCTCCATCTTCTCCCAATCTCCTTCTTCACCACTGAAACCCTAATAAAACCTTGCAGTCATCACCGCCATCGGCCTCGGCCGTCGCCGCCGGCAACCACTCGTCGGCCGCCGGCCTTCAAATTTTTTTTCTTCTTTTCTTCTCTTTTTTTCTCTCTCTCTCACCATCTCACGCCGCCGCAAGCCTTCCGGTGAGTCCCTTCCCTCATCCCTCTCATTTTCTCTCTTACCCACGTCTCCTTCTCTCATCCCCTCTCACTCACTCGTTTGCTCTCCCTCTCGTCTCTGTAGTGTAGATCCACCACCGCAAACGCCGCCATTGGAATTCGGAGTTCCGGTGAGTGGAGAATGTGATGTTCAGATGTGGCCATTGGAACATAGGTTCTTCCATGGCGTCGTCGGACTGTTAGGGAATCGCTGGACCTCTCTCGTTCGAGCAGATCTGGAATCGCTGGAATCGCCGAAACTAAAGGTCTGAAACTCATCGAAACTGAAGATCTGGAATCTGCCGCTCGTGGATGCTCGTCTGTAACTCACTGAAATCGCAGATCTGGAAGCTCGTCGTCGCCGCTCGTGGATGCTCGTCCGAAACTCGAGGTTCGATTTCAAGCGTCGAAGTTACAGGTTCGTTCGCCGTGGAGCTGTTGGTCCGCCGCAGGTCGTTCAATTTCAAACCCATGATGTCGCTGCTCGAATTTCGTTCTAGATCTAGCCTCGTTTCGGTATAAAAACGCCGTTTTAGCTCGTGGACGACGTTGCTTGTTGAGTGGAAAGGGGAAGAAGAAAGGAAAAAAAAAGTTGCCGACGGCGACGACCGCTCGCCGGCGCTGGAGACTTGAAGAAGAAGAAGAATGATGGGTGAGGAAAGATGGGAAGAGAAAGAGATGAAATAATAATTAAAATAATAAAAAAATAATAATATTTTATGGTTTTTATTTAAAAATAAAAGAAAAGATTTTTTTTAATTAAAAAAATGTGGCCACGTCAGCATTCTGTTAGCATTTAACGGAAAAATGGACGGCAGGGACCAAATTGCTCCTTATCTAAAACCTCAGGGGTATTTTTGTTCAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCATGGACCAAAAGTGTATTTTTCCCAATTGAAAATAATTTTCAGATTATTAATTAAAATCAATTAACTAAAATTAATTTTCAATTGAATGAATTAAATGAAAATGAAAATGAATTTTAGGAGGTGGAGTGCATTAATTAGCCAACAAATCCCACTCAATTTGGGATTAATTTGTTGTCAATCTTTGGTGCTTCAACTCAGCATGGTTTCCTCTTTAAATAGAGGAAGATTTGTTGAAGAAAGGGGGCTGGAAATCTTAGTGTTATGCTGCCAAAATCATCCCTCAAGCTCATGAACCAAAAATTTCTCATAGCTTGAAACCCAAGCACTTTCCCTTCAAATTTCCATCACTAGAGGATCCCACAATCTGTTCCAAAGGCCTGAGAATAACAAGGAATATCTTGTTGTGGTTCGTGATCAGTTGGTGAGGAAAAACAACAAATCAATCTGTTCAATTTTGAGCTACACAAGTGGTTGGTACTCATGAACTCTATTTTTCCTCTTATGGACACCATGCTTTGTATGATCAAATTGATGTTATTATGTGTCTAAGATCCAAAATTGCTTCCGCATGTTAGATATTAACACTTTCGGTTCTAATGTACTAGCATATTAGTTTGGAATTAAAAGCTGAGTTATGGTCCTTTGATAAATTCTGCTACGCTTGAGATTTTAACCCAACAAAAATGTGTCTAAGGAGTGCACTCAAAGAATTTGCGCCACATTTGCGATCGCAATTGGGCTTTTCGATAGGATTCCGAGATTGACAGGATTCGAATAGAATCTTCCAAAAACCATATATCTCGTACCAAATCTTCAAGGATCGTGGATTTTCACTCTTAAGGGACTTCTCACATTGATCTCAGTAGCCAACCTTACCTTCCAAGGTCTATATAAGGTGTGCAAGATTCAAGAAGCAAAGGGAGCTTGGATTTTCGTCCTAGGATTGTCCTTATGTTTTTCTTTCTTCTCATCTTGTAGTCAATCCGAGTTTCGGTTCTTCTAGCCTCTGCCAGCTCCTCCATTCAAAAGAAGAAGACGAGAAAGACTTGTCTCCCCTTGAAAAAGGCAAGAGCAAGTTAG

mRNA sequence

ATGTCTACAGTGAGGGGAGTGCAACTACTAGGCTATAGTGGAGTGACCCGTCATCACCGCCATCGGCCTCGGCCGTCGCCGCCGGCAACCACTCGTCGGCCGCCGGCCTTCAAATTTTTTTTCTTCTTTTCTTCTCTTTTTTTCTCTCTCTCTCACCATCTCACGCCGCCGCAAGCCTTCCGTGTAGATCCACCACCGCAAACGCCGCCATTGGAATTCGGAGTTCCGGTGAGTGGAGAATGTGATGTTCAGATGTGGCCATTGGAACATAGGTTCTTCCATGGCGTCGTCGGACTGTTAGGGAATCGCTGGACCTCTCTCGTTCGAGCAGATCTGGAATCGCTGGAATCGCCGAAACTAAAGATCTGGAAGCTCGTCGTCGCCGCTCGTGGATGCTCGTCCGAAACTCGAGGTTCGATTTCAAGCGTCGAAGTTACAGGTTCGTTCGCCGTGGAGCTGTTGGTCCGCCGCAGGTCGTTCAATTTCAAACCCATGATGTCGCTGCTCGAATTTCGTTCTAGATCTAGCCTCGTTTCGCTTGAAACCCAAGCACTTTCCCTTCAAATTTCCATCACTAGAGGATCCCACAATCTGTTCCAAAGGCCTGAGAATAACAAGGAATATCTTGTTGTGGTTCGTGATCAGTTGTCAATCCGAGTTTCGGTTCTTCTAGCCTCTGCCAGCTCCTCCATTCAAAAGAAGAAGACGAGAAAGACTTGTCTCCCCTTGAAAAAGGCAAGAGCAAGTTAG

Coding sequence (CDS)

ATGTCTACAGTGAGGGGAGTGCAACTACTAGGCTATAGTGGAGTGACCCGTCATCACCGCCATCGGCCTCGGCCGTCGCCGCCGGCAACCACTCGTCGGCCGCCGGCCTTCAAATTTTTTTTCTTCTTTTCTTCTCTTTTTTTCTCTCTCTCTCACCATCTCACGCCGCCGCAAGCCTTCCGTGTAGATCCACCACCGCAAACGCCGCCATTGGAATTCGGAGTTCCGGTGAGTGGAGAATGTGATGTTCAGATGTGGCCATTGGAACATAGGTTCTTCCATGGCGTCGTCGGACTGTTAGGGAATCGCTGGACCTCTCTCGTTCGAGCAGATCTGGAATCGCTGGAATCGCCGAAACTAAAGATCTGGAAGCTCGTCGTCGCCGCTCGTGGATGCTCGTCCGAAACTCGAGGTTCGATTTCAAGCGTCGAAGTTACAGGTTCGTTCGCCGTGGAGCTGTTGGTCCGCCGCAGGTCGTTCAATTTCAAACCCATGATGTCGCTGCTCGAATTTCGTTCTAGATCTAGCCTCGTTTCGCTTGAAACCCAAGCACTTTCCCTTCAAATTTCCATCACTAGAGGATCCCACAATCTGTTCCAAAGGCCTGAGAATAACAAGGAATATCTTGTTGTGGTTCGTGATCAGTTGTCAATCCGAGTTTCGGTTCTTCTAGCCTCTGCCAGCTCCTCCATTCAAAAGAAGAAGACGAGAAAGACTTGTCTCCCCTTGAAAAAGGCAAGAGCAAGTTAG

Protein sequence

MSTVRGVQLLGYSGVTRHHRHRPRPSPPATTRRPPAFKFFFFFSSLFFSLSHHLTPPQAFRVDPPPQTPPLEFGVPVSGECDVQMWPLEHRFFHGVVGLLGNRWTSLVRADLESLESPKLKIWKLVVAARGCSSETRGSISSVEVTGSFAVELLVRRRSFNFKPMMSLLEFRSRSSLVSLETQALSLQISITRGSHNLFQRPENNKEYLVVVRDQLSIRVSVLLASASSSIQKKKTRKTCLPLKKARAS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0000511Lag0000511gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0000511.1.exon6Lag0000511.1.exon6exon
Lag0000511.1.exon5Lag0000511.1.exon5exon
Lag0000511.1.exon4Lag0000511.1.exon4exon
Lag0000511.1.exon3Lag0000511.1.exon3exon
Lag0000511.1.exon2Lag0000511.1.exon2exon
Lag0000511.1.exon1Lag0000511.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0000511.1cds.Lag0000511.1_6CDS
cds.Lag0000511.1cds.Lag0000511.1_5CDS
cds.Lag0000511.1cds.Lag0000511.1_4CDS
cds.Lag0000511.1cds.Lag0000511.1_3CDS
cds.Lag0000511.1cds.Lag0000511.1_2CDS
cds.Lag0000511.1cds.Lag0000511.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0000511.1Lag0000511.1-proteinpolypeptide