Sed0006426 (gene) Chayote v1

Overview
NameSed0006426
Typegene
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L18a
LocationLG06: 19610948 .. 19620450 (+)
RNA-Seq ExpressionSed0006426
SyntenySed0006426
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATTCGGGCCAATGGTGGAGGCAGAGCAGTTTAGGGTTTTCATTCATTAGCAACACAATTTTAGTTTAGCGCAGAGTTATTTGGCGATCGGTGTCGAGAGAACCAGAGAGAAGCACCGGCGCCGATCCCTCTCAGATTCTTGAGTTCAAAATGGTCACATTCAAGGTAACAATCTGCTTCATGAACACTCGAATCGATTTTTCATTTACGTTATTCTTCGCAACATTTTTCCTTCCTGACAAGAACTAGCTACAGTTGTTGTTCATAGATTTAGTTCTTCCATTTGGAACTGGATTTGCAAAGACTTTGATCTGTTTTCGTATTTTGTGTTTTCTTTCATCGGGAAGCAGTTTCATTAGTACCAAGTTGTGGGGAGAGCTCTTCCTTCTGAAGCTGATGAGCATCCCAAGATCTATCGGATGAAGCTGTGGGCAACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTATGCTCTTCAATTCTTCCATCTTTAATTCTTGCTTTGCTCGCTTATCTTGATCTTATAGTTCTGTTCTTGTATTTACAGTGTAAGGTTTATTAGTACAATTTAGATGATTTCTACAAATTTTGGGGAGGGGTTTGAATAATTATGCTTACAGTCCTAGTTACATTTTATGTTTATCATTGGATTTAAGATTTCCAATTAGGGATTTGCCAATTTTTGTTGGTAGCTAAGTAGCCAAAAAGACAATAAAAAACTGAAAGGTTGTGGGTTCAATCCATGTTGGCCATCTACCCTAGGAATCAATTTCCTATGGTTTCTATGACTTCCAAATGTTGTAGGGTCATAGAGTATGCTCGGGAGAATAGTTGAGGTGCATTTAAGGCGTCCTCGACAACTCACATGTATATAAAAAAAATCTAATATATTGTCGATTAATTTTAAATTTCAAAGTTTTTGTTTTTCCTCTAATGAATTGACCAATGTGTTGGGTATTTTTTAGCTATGTTGGCTGCTTTGGGTAGATGAAATTGATATCCTGATCCTCACATCTGTACAGGTACTTTTTGAGGAAGCTGAAGAAAGTTAAGAAGAGCAATGGTCAAGTTCTTATCATTAACGAGGTATTGGGTCTGGAACATGCTTCTACATATTACTATCGTGCAACCATGATATGATAAGACATTTTTATTTTGATTTTTGAGCTAGTTTCATATTCTTAATGGTTTTCCCATGTGTTAGATGTATTTTTTTCCATAAACACTTCTATTTTATAGACTTACTTTGGCATATGATTCCTGAATGGAAATAAATAACATGTCAGGTTAATTCATTATAGAATGTATAACTGGCTCGAAGTATGCTTCATATGTTGTTTATATGTTTCATAAAGTGAGTGCAGTTCTTCAAATGTTTTCATGAGTTCCTAGAATATATATGCATATTATGTCTTTTTTACATGAGAAGTGCGCTTATATGTATAAATTTCTATAATTGAAACTTGTTGTTCCATTTGAACGTTTACTCCTAAGTGAACTGATACAATTCGATCCTGGGACTTTTGGGAATATTAGGATTATTAGTATTTTATTATTATTTAATTAGTCCTTATTTGTACTTGCCATAAATGGAATTGTCATTTATGGAAAGAAGTCTTTTACGGAATAGGAGTCTTATACCTTAAATAGGATATCTCTAGGTGTCCTATAAATAGGAGTTATTAGGTCATTGTTAAGGTATCAGAAATCATTTGTCATTTGTAGTATGTAACCCTTTGGCTCTACGGGAGATTCTCTCTAGAGATTTATTAAAAAGTTGGTAGATTCTATCAATTGTGGTATCAGAGTCGTTCACCGTTCCGGGAATGGTTACTACAAAGATGGAGTCAAGAATGCAAGAATGCGAAGAGGTTTCGACCGAGATAAAGAAGCAACAATAGGAAATCATGGAGAAGTTAGAAAACATGGAAGATCGGCTGGGGCAAAAGATCGAGGAAAGGATAAAATCCATGGTGGGCGAACTTCAATCCATGATCGAGCGAACCGTGAAGCAACCAATCTCCGAAACGGGCAATACGGACAAAGGGAAGAGAGCGATGAGCGAAATTGAAGACAGGAGCGGCGACACGGTCGGAGACTTCGCCACGACGAAGGAGTCACGATGCGGCGGTGAACAATGGCTGGTGCGAGCGAGATTAGCTGATGAGACGTGAGTGAATGGCGAACCAGGACGCGGTAGAGAACAAAGGTTGGTGCGAGCGAGATTCGCTGATGTGACGCGATTGCATGGTGAACCAAGATTCGCTGGACGCGAGTTAGGTCAAGCCGTCGCGGCGGAGCGCGAGCGCGAAGGCACGGGGTGGGTCGGAGCGAATGGCGAACGAAGAAGTACAAGTTACGTCGGGGCGAAATATGAGCGAGGAAGCATAAGAAGAGTTGGTTTCGCTAGTGCGAGGCGCGAGGATGCGGGCGAGTGGTTCGCGGTAGCGCAGCGTGACAGCGAAGGATTCCTGGGCAAAGGCGTTTCGTAGGGTGATAGTGCGGGGGCGAAGGGAGGTGGTTTCGCAGGGCGTCAACGGAGGGTTCCTGGGCTGAGGTGTTGCACATGGCGACGGCGTAGGGGCAAGGAGAGGTAGTTTCAGCGTCGCGGAAGCGGGATTTTGCGGAAGCAACGACATTGGAAATACGGGGGAGAGATTTTGCGGAGGCGGCACGGGCGTCGCTGGAGCAGGGTTCAGCGAAGGCGGAGCCAACACTATAGTGCGCGGAGGTGGAACTGCGCAGCGGTGGTCAAAAGCGCACGACGCAGCATGGGGTGAGTCGACGGTCTCGTGCTGGGCGACCGGTCAATTTGGGTTGGACCGGGTAGACCGTTGGACTGAGCCGTTTGAGATAGGAATTATGGGAGACCCTAGATTTGACGGTTGGAACGATTGTGGTTGGGGTGCCACTGTCCGAAATAAGGGACGAGATTTCGGTGGGGAGTAGAAGAAAGATTCGAGAGGGGAGGTCAGAGAGCAGGAGGAAGGGAGGGACCGGGATACGACAGGAGATTTAGAAAACTGGAGATGCCAGTTTTCAAGGGTCTTACTGATGAGGATCCGGTGGGATGGCTGAGCCGGGTCGAGCAATATTTCCTAGTAAACACGCTAACTGAATATGAAAGGTTTGAGGTAGCAGGGTTATGCTTAGAAGGGGAGGCATTTGAGTGGCTTGAGTATGAGGAGGACCGTGCTCCTTTTCGTTCCTGGAACGAATTCAAAGAGGGGTTGTTGGCACGTTTCCAACCGGTGGCTCAGGCAAATAAGTATGTCAACTTCATGAGTTAGGAACAATGAAGGAATACCGTAGAAGCTTTGAGCGCTTTGCTAAGGGAATGCGCGATATCAACGTGAGTGCATTGGAGGGGAAGTGGGAAAGTGGACTGAAAGAGGAGATACAGAGTGCGATGTGTAAACTGCGACTAGTGGGCATCGAAGAGAAAATGTTTATGGCCCAAGTGATTGAGGATGATTTTGCTTTTCAGGCTGCCAAAAACGAAGGAAGTACTTCTACAATGGTCAAGTCTAAAGCAGGAACGATTGTGTCGATGGCTGGAAGTACAGAGACGTCTTCCTAGAAGACTACAACCGTTCTCCCGGCGTCTTGTAAAAAACTATCTTAAGCCGAAATTCGAGTGAGGAAGGACAAGGGGTTATGCTTCCGCTGTGATGAACAATTTGTTCTAGGGCATCGTTGCAAGACTACAGAGCTCCAGAACTTGGATGCGTGGATCATCCTGGATGCGCACGATTACCAGAGAGCTGGTGTGACAAACTTTTCGCCAGAAGACGGAACTGCAGAAGACGGCGTCGAAGATGGAACACCTTGAGGACAAGGTTGGCTCTTAGGGGGGGGGGAAGTATTGATACAATCCAATCCTGGGAGTTTTGGGAATATTAGGATTATTAGTATTTTATTATTATTTAATTAGTCCTTATTTATACTTGCCATAAATGGAATTGTCATTTATGGAAAGAAGTCTTTTATGGAATATGAGTATTTTACCTTAAATAGGATATCTCTAGGTGTCCTATAAATAGGAGTTATTAGGTCATTGTTAAGGTATCAGAAATCATTTTTCATTTGTAGTTTGTAACCTTTTGGCTCTACGGGAGATTCTCTTTAGAGATTTATTATAAAATTAGGTTAGATTCTATCATGAACTTCCGAAAATATTTTATTTCTTTTATAGTGGTTTAAGTTTCTATTTGGTTGCTTTTGTTTCTTACACTGTTGTAGTGTACTCGATTCACATCTAATTTCATGTAAGATTCTGGTTTGAAAATGAACATCTCTTCTCCATGTATCAAATCACATACAACCAATAATCTTTTCGTATTCACTTTTTTTAATTTGTAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGCATTTGGCTGCGATATCAGAGCCGAACTGGATATCACAATATGTATAAGGAGTACCGAGATACTGTTAGGTTGAACACACAAGAACAACAAGTGGTATCAGAGCTCCGTGGTTGAGTTTATTTAGAGGTCTTGTGTTAAATATGAAAAAGAGTCATAATGGTGGTAGAATGGTTCTTTTGAATGGATCAAATTATCAAGTTTGGAAAAGAAAAATGGAAGATATTTTATATGTCAATGATCTATATCTTCCCGTATTTTTACTAGAGAAGCCGGCTGATAAAACCGATTTAGATTGGGAAATGTGTCATAGGAAAGTATGTGGCATGATTAGACTTTGGGTCGAAGAGAATATTCTAAATCATATTGGTGAAGAAAATCATGCAAGGTCTATGTGGAACAAGCTTGAGTCTTTGTATGCCCCGAAAATTGGTAATAGTAAATTGTATTTGATTAAACAAATGATGGCTTTAAAGTATCAAGAAAGAACGTCTATGTTAGATCACTTGAATACATTCCAAGGTATTATTAATCAGTTAGCTGGAATGAGTATCAAGTTTGATGAGGAAATACATGGGTTATGGCTTCTTGGTTCATTACCAGATTCATGAGAGACTTTTAGAACTTCCTTGTCGAACTCAAATTTCAAATGGTGTACTAAGTATGGACTTGGTAAAAAGCAGTGTATGTAACGAAGATATGAGAAGAAAGTCACAGGGTTCTTCTTCACAGTCTGATGTTCTTATTACTGAAAGAAAGGGGAGGAGTACGAGCAAATGTCCGAAAAATAGAGACAGAAACAAGAGCAAGAGTGACCGATTTTCTAATGTTGAATGTTTTCATTGTGGCTTGAAAGGTCATATAAAGAAGCATTGCAGAAAAATGAAGAGAGAAAATAAAGCTGATAAAGGTAAAGAAAAAGTGACTGATGATGATGATGCCGACCAATTATCACAGCCATCAAGAATTCTTCGTTGTATTCGACGGTGATAGTGTAAACCTTGCTACAGCAACACGGTTGGGTTATTGATAGTGGTGCCTCAATTCATGCTACATCTAGGAAGGAATTCTTCACATCCTACACATCTGGTGATTATGGTAGTGTTAGGATGGGTAATGATGGATTAGCAAAAGCAATTGGCATAGGAGATGTGCATTTGGAGACCAAGAATGGTACTACCTTAATTTTGAAAAATGTGAAGCACATCCCTGATATTTGCATGAATTTAATCTCCACAGGTAAGCTAGATGATGAAGGTTTTTGTAATACCTTCTGTAATGGTACATGGAAGCTTACTAAAGGCTCAATGGTGGTAGCAAAGGGGGAGAAGTGTTCTTCATTGTACTTTATGCAGGCAAAGACTACTGGTTGTGATATCAATGCAGTGGATAGTGAACAAAGTGTTGAGCTTTGGCATAAAAGACTCAGTCATATCAGCGAAAAGGGTTTGATGATTCTAGCCAAGAAAAATCATCTTTCTGGAGTAAAGAATGTGTCCTTGAAGAGATGTGAACATTGTTTAGCGGGAAAGCAAACAAGAGTTTCTTTTAAAGCATCTCAACCTTCAAGAAGACCAGAAGTACTTGACATAGTATATTCTGATGTGTGTGGTCCGATGAAAACAAAAACACTTGGAGGTGCGTCCTATTTTGTGACGTTTATAGATGATCACTCAAGGAAAACATGGGTTTATACCTTAAAGTCTAAAGATCAGGTGTTGCAAGTGTTTAAACAGTTTCATGCTCTTATTGAAAGAGAAATTGGTAAAAAGTTGAAGTGCATCAAGACCGATAATGGAGGAGAGTATATTGGACCTTTTGATGAGTATTGCAGAAATCATGGTATACGACATCAAAAGACGCATCCAAAGACTCCTTAGCTAAATGGGTTGGCTGAGAGAATGAACAGGACATTGGTGGAAAGAGTGAGATGTTTGCTTTCACAGTCACAGTTAGCCAAAATGTTTTGGGGTGAAGCATTGAATACAGTTGTACATGTTCTGAATCTCACACCATGTGTTCCTTTGGGAAATGAAGTCCCCAACAGAATTTGGTCAAAGAAAGACATATTGTACAATCATCTTCGTGTCTTTGATTGTAAAGCTTTCGTTCACGTTCCTAAAGATGAGAGATCGAAGCTTGATGCAAAGACAAGACCATGTGTGTTCCTTGGCTATGGTCAAGATGAGTTTGGCTACAGGTTGTATGATCCAGTGAAGAGAAAACTTATTAGAAGTCGAGATGTTGTTTTTGTTGAAGACCAAACCATACAAGACATTGATAGAACTGATGAAACAGAATCAGAAAATGGTGATGATCTGATTGATTTAGATACAGTTCCTTTGACACAACTTTCTACACAGATTGAGAATGAAATACAAAATGATCAGTTTGATAATTCAGATGAGGTAGAAGGTCATGAACAGGTTGAGGTAGATGATGATATTCAGGAACACTTGTCAGAAGCTGAAGTTCCTATACATGTTCCACTCAGAAGGTCTGTCAGAGATCGCCGTCCGTCAACAAGATATTCTGCCGATGAATATGTGTTATTGACTGACGGGGGAGAACCTGAGAGTTATGAAGAGGCTATAGAAGATGAGCACAAAAGAGAGTGGATTGATGCTATGAAAGATGAGATGAAATCTTTACATGAGAACCACACTTTTGAGCTTGTTAAATTGCCTAAAGGGAAAACTGCATTGAAAAATAAGTGGGTTTATCGAGTGAAACAAGAAGAAAGCACCTCAAGACCGCGTTATAAAGCGAGATTAGTTGTCAAAGGGTTCAGTCAGAAAAAGGGTATTGACTTTGATGAAATTTTTGCTCCAGTTGTTAAGATGTCTTCGATTCGAGTTGTTATGGGTTTGGCAGCTAGCCTTGACTTAGAAGAGCATGGATGTTAAGACTGCATTTCTTCATGGAGACCTAGATAAAGAAATTTATATGGAACAACCTGAGGGTTTTGAAGAGAAAGGCAAAGAGAAACTTGTGTGCAAGTTGAAGAAAAGCCTTTATGGATTGAAACAAGCACCGAGGCAATGGTACAAGAAGTTTGAGTCAGTTATGGGGGAGCAAGGCTACAAAAAGACTACTTCTGACCATTGTGTTTTTGTACAAAATTTTTATGATGATGATTTTGTGATATTATTGTTGTATGTTGATGACATTTTGATTGTTGGCAAGAATGTTTCTAGAATTGATAGTTTGAAGAAACAGTTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGTAAAGAAGATTCTTGGAATTCGAATAGTTCGAGACAGAGCATCTAAGAAGTTGTTTCTGTCACAAGAGCAATACATAGAAAAAGTGCTTGAAAGATTCAACATGGATAAAGCTAAAGTTGTTAGCTCCCCTCTTTCTAGTCATTTCAAACTGAGTAGCAAACAGAGTCCTTCTAATGATAAAGAGAAGGAAGAAATGAGGAAAGTCACATATGCTTCAGCAGTTGGGAGTTTGATGTATGCCATGGTGAGTACTAGACCTGATATTGCTCATGTTGTTGGAGTTGTTAGTCGATTTATGTCCAATCCAGGAAAATAGCATTGGGAAGCAGTCAAGTGCATCATGAGATATTTGAGAGGCACTTCCAATTTGAAGCTCACATGTGGAAGTGGAAAGCCCTTGCTTACGGGCTATACTGATTCAAATATGGCAGGAGATCTAGATAACCGACGGTCTACTTCGGGTTATTTGATGACGTTTGCAGGTGGTGCAGTGTCTTGGCAGTCAAGACTACAGAAGTGCGTTGCACTTTCTACTACGCGGAATATATAGCCTGCAGCAGGTTGCAAAAGAGATGTTGTGGATGAAGCAGTTTATACATGAGCTTGGCTTCAAGCAACAACGGTATGTGATATTCTGTGACAACCAGAGTGCTATTCGTCTTGGTAAGAACTCTACATTTCATTCCAGAACTAAACATATAGATGTGAGGTATCAGTGGATGAGAGATGCATTGAATGATGGCTTGTTTGAGCTTGAGAAGGTACATACGGATCATAATGGTCTGATATGCTGACTAAGAATCTACCAAGAGAGAAGCTTCAGTTTCTAAGTGTTTTAAAGTGCATTTTGTTAATTTGGTAGAGAGAACACACAACAAAGGGAGAGCTGGAAAATCAGCAGCTGGAGAGAGAAAGTAAATAGAGAAGAAAAGAGGTTTCTGCCCAGCTTTGATATTTTGGCGTTTCCGAGCGATTGCACCGTTGGATCGAGCTGAACTTTGGACAGCGTGTTCTTGACACGAGGGTCTTCAATCTGAACGGTGGAGATCGAGTTTGGAGGTTTCTACAGCCAGATTACAATGACGATTCGGTTCCACATTTTTGTGAGATCTTTCTATTTATCTCTCTTGATTTGTGTTGTTTGTTGCCGAGATTAGTTTATCTTGAGTTGTTATGTATTGTATACCTCTAGTTGTAACTAGAGAGAACTTGTTGTAGCTCATTATCGATTATAGTTGAGATTCGACTTCGGTCCGTGGTTTTTTTACTCCTCGCCTTGAGGAGGTTTTTCCACGTTAAAATTCGTTGTGTTGTACTTGATATTTCTACCATAATATATACTTGCTGATTTTTCATTAGGAACACAAGAGGGAATAATTGATCCATATTAGAATAGTGTTTATTCCCAACAGATACGACATTGAATGGGGCTGTCGAGCACATGTATAACGAGATGGGCTCTCGCCATAGGGTGAGGAGCCCATGCATTCAAATCATTAAGACAGCAACAGTTCCTGCAAAACTCTGCAAGAGGGAAAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCCTTGGTGTTTAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAGGCCCAACCTGTTCATGTAATTCTGCTCATTTTGAAATCTCTTTTTCTATGGAAACATTTGATTATTGATTTGGGTAAATTATAAAAACTACCACAAGTAGATGAAGTTTCTGTAAAACCATTGGTTCTTGTTCTAGCTACAATTATTCCCTCTGTTTTGGAGGCTGTGAGATGAGTTTGACAATTTTGGTCTGATTAGTTTAAAGCAAA

mRNA sequence

GTATTCGGGCCAATGGTGGAGGCAGAGCAGTTTAGGGTTTTCATTCATTAGCAACACAATTTTAGTTTAGCGCAGAGTTATTTGGCGATCGGTGTCGAGAGAACCAGAGAGAAGCACCGGCGCCGATCCCTCTCAGATTCTTGAGTTCAAAATGGTCACATTCAAGTTTCATTAGTACCAAGTTGTGGGGAGAGCTCTTCCTTCTGAAGCTGATGAGCATCCCAAGATCTATCGGATGAAGCTGTGGGCAACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGGAAGCTGAAGAAAGTTAAGAAGAGCAATGGTCAAGTTCTTATCATTAACGAGTGTTTATTCCCAACAGATACGACATTGAATGGGGCTGTCGAGCACATGTATAACGAGATGGGCTCTCGCCATAGGGTGAGGAGCCCATGCATTCAAATCATTAAGACAGCAACAGTTCCTGCAAAACTCTGCAAGAGGGAAAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCCTTGGTGTTTAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAGGCCCAACCTGTTCATGTAATTCTGCTCATTTTGAAATCTCTTTTTCTATGGAAACATTTGATTATTGATTTGGGTAAATTATAAAAACTACCACAAGTAGATGAAGTTTCTGTAAAACCATTGGTTCTTGTTCTAGCTACAATTATTCCCTCTGTTTTGGAGGCTGTGAGATGAGTTTGACAATTTTGGTCTGATTAGTTTAAAGCAAA

Coding sequence (CDS)

ATGAAGCTGTGGGCAACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGGAAGCTGAAGAAAGTTAAGAAGAGCAATGGTCAAGTTCTTATCATTAACGAGTGTTTATTCCCAACAGATACGACATTGAATGGGGCTGTCGAGCACATGTATAACGAGATGGGCTCTCGCCATAGGGTGAGGAGCCCATGCATTCAAATCATTAAGACAGCAACAGTTCCTGCAAAACTCTGCAAGAGGGAAAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCCTTGGTGTTTAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAGGCCCAACCTGTTCATGTAA

Protein sequence

MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECLFPTDTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Homology
[Close]
BLAST of Sed0006426 vs. NCBI nr
Match: XP_024928667.1 (aspartyl protease family protein 2 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 634 MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTG 693

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFH+SK
Sbjct: 694 YHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSK 753

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 754 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 783

[Close]
BLAST of Sed0006426 vs. NCBI nr
Match: RWR89101.1 (60S ribosomal protein L18a-like protein [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFERRPTKIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE+MYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFHDSK
Sbjct: 89  YHNMYKEYRDTTLNGAVEYMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHDSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. NCBI nr
Match: RWR89097.1 (60S ribosomal protein L18a-like protein [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFERRPTKIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE+MYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFHDSK
Sbjct: 89  YHNMYKEYRDTTLNGAVEYMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHDSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. NCBI nr
Match: AFK33651.1 (unknown [Lotus japonicus])

HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53
Identity = 115/150 (76.67%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTTIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMYNEM SRHRVRSPCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLV+KK+RPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. NCBI nr
Match: XP_015877073.1 (60S ribosomal protein L18a [Ziziphus jujuba])

HSP 1 Score: 217.6 bits (553), Expect = 5.9e-53
Identity = 116/150 (77.33%), Postives = 117/150 (78.00%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIDNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMY EM SRHRVRSPCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEHMYTEMASRHRVRSPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-52
Identity = 109/150 (72.67%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPP+RKLKTTYKA++PNLFM
Sbjct: 149 IKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.8e-50
Identity = 106/150 (70.67%), Postives = 113/150 (75.33%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTAT+PAKLCKRES+KQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLV +K+RPP+RKLKT YKASRPNLFM
Sbjct: 149 IKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-49
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATVPA LCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 149 IKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-49
Identity = 105/150 (70.00%), Postives = 111/150 (74.00%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATV  KLCKR++TKQFH S 
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSD 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLV++KVRPPTRKLKTT+KASRPNLFM
Sbjct: 149 IKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-49
Identity = 104/150 (69.33%), Postives = 110/150 (73.33%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNG VE MY EM SRHRVR PCIQIIKTATVPAKLCKRE TKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 149 IKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match: A0A6P6G3D7 (aspartyl protease family protein 2 OS=Ziziphus jujuba OX=326968 GN=LOC107416111 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-54
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 634 MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTG 693

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFH+SK
Sbjct: 694 YHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSK 753

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 754 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 783

[Close]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match: A0A3S3NBT8 (60S ribosomal protein L18a OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01814600 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.8e-54
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFERRPTKIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE+MYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFHDSK
Sbjct: 89  YHNMYKEYRDTTLNGAVEYMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHDSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match: A0A3S3MST0 (60S ribosomal protein L18a OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01815000 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.8e-54
Identity = 116/150 (77.33%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFERRPTKIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE+MYNEM SRHRVRSPCIQIIKTAT+PAKLCKRESTKQFHDSK
Sbjct: 89  YHNMYKEYRDTTLNGAVEYMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHDSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match: I3S059 (60S ribosomal protein L18a OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53
Identity = 115/150 (76.67%), Postives = 118/150 (78.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTTIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMYNEM SRHRVRSPCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLV+KK+RPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match: A0A6P3ZGB1 (60S ribosomal protein L18a OS=Ziziphus jujuba OX=326968 GN=LOC107413592 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.9e-53
Identity = 116/150 (77.33%), Postives = 117/150 (78.00%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVL INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIDNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVEHMY EM SRHRVRSPCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEHMYTEMASRHRVRSPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVFKKVRPPTRKLKTTYKASRPNLFM
Sbjct: 149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]
BLAST of Sed0006426 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-53
Identity = 109/150 (72.67%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATVPAKLCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPP+RKLKTTYKA++PNLFM
Sbjct: 149 IKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]
BLAST of Sed0006426 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATVPA LCKRESTKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 149 IKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]
BLAST of Sed0006426 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+L INE     PT                
Sbjct: 163 MKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTG 222

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNGAVE MY EM SRHRVR PCIQIIKTATVPA LCKRESTKQFH+SK
Sbjct: 223 YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSK 282

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 283 IKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

[Close]
BLAST of Sed0006426 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-50
Identity = 104/150 (69.33%), Postives = 110/150 (73.33%), Query Frame = 0 

Query: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLIINECL--FPT---------------- 60
           MKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+L INE     PT                
Sbjct: 29  MKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTG 88

Query: 61  ---------DTTLNGAVEHMYNEMGSRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSK 120
                    DTTLNG VE MY EM SRHRVR PCIQIIKTATVPAKLCKRE TKQFH+SK
Sbjct: 89  YHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSK 148

Query: 121 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
           IKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 149 IKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

The following BLAST results are available for this feature:
BLAST of Sed0006426 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024928667.11.6e-5377.33aspartyl protease family protein 2 [Ziziphus jujuba][more]
RWR89101.12.0e-5377.3360S ribosomal protein L18a-like protein [Cinnamomum micranthum f. kanehirae][more]
RWR89097.12.0e-5377.3360S ribosomal protein L18a-like protein [Cinnamomum micranthum f. kanehirae][more]
AFK33651.13.5e-5376.67unknown [Lotus japonicus][more]
XP_015877073.15.9e-5377.3360S ribosomal protein L18a [Ziziphus jujuba][more]
BLAST of Sed0006426 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514183.0e-5272.6760S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=... [more]
Q9ATF52.8e-5070.6760S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1[more]
Q8L7K01.4e-4969.3360S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=... [more]
Q943F31.4e-4970.0060S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE... [more]
Q9LUD43.1e-4969.3360S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=... [more]
BLAST of Sed0006426 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6P6G3D77.5e-5477.33aspartyl protease family protein 2 OS=Ziziphus jujuba OX=326968 GN=LOC107416111 ... [more]
A0A3S3NBT89.8e-5477.3360S ribosomal protein L18a OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CK... [more]
A0A3S3MST09.8e-5477.3360S ribosomal protein L18a OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CK... [more]
I3S0591.7e-5376.6760S ribosomal protein L18a OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
A0A6P3ZGB12.9e-5377.3360S ribosomal protein L18a OS=Ziziphus jujuba OX=326968 GN=LOC107413592 PE=3 SV=... [more]
BLAST of Sed0006426 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G34480.12.2e-5372.67Ribosomal protein L18ae/LX family protein [more]
AT1G29965.11.0e-5069.33Ribosomal protein L18ae/LX family protein [more]
AT1G29970.21.0e-5069.3360S ribosomal protein L18A-1 [more]
AT3G14600.12.2e-5069.33Ribosomal protein L18ae/LX family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.10coord: 1..41
e-value: 2.1E-17
score: 64.7
NoneNo IPR availableGENE3D3.10.20.10coord: 42..93
e-value: 1.0E-9
score: 39.9
NoneNo IPR availablePANTHERPTHR10052:SF4560S RIBOSOMAL PROTEIN L18Acoord: 43..82
coord: 83..123
coord: 1..37
NoneNo IPR availableSUPERFAMILY160374RplX-likecoord: 42..91
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 1..37
e-value: 2.3E-9
score: 37.4
coord: 43..73
e-value: 7.3E-8
score: 32.5
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 83..123
coord: 1..37
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 43..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006426.1Sed0006426.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006508 proteolysis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0051082 unfolded protein binding