Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG
mRNA sequence
ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG
Coding sequence (CDS)
ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG
Protein sequence
MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV
Homology
BLAST of Lag0019938 vs. NCBI nr
Match:
XP_023542516.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 120/164 (73.17%), Postives = 137/164 (83.54%), Query Frame = 0
Query: 1 MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1 MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60
Query: 61 VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
D LK SD E ++VSE+ NPSCSE+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61 SDDSLK-----SDLESIEVSESETAMNPSCSETDSKAPARKNRCGLCNKKVGLLGFSCRC 120
Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
GGLFC HRF+++HGCNFDMK VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCNFDMKTVERERLGRQMIEIKGDKLEYRV 159
BLAST of Lag0019938 vs. NCBI nr
Match:
KAG7013187.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 242.3 bits (617), Expect = 3.0e-60
Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 0
Query: 1 MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1 MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60
Query: 61 VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
D LK SD E ++VSE+ NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61 SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120
Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
GGLFC HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 159
BLAST of Lag0019938 vs. NCBI nr
Match:
KAG6574126.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 241.9 bits (616), Expect = 3.9e-60
Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 0
Query: 1 MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1 MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60
Query: 61 VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
D LK SD E ++VSE+ NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61 SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120
Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
GGLFC HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCCMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 159
BLAST of Lag0019938 vs. NCBI nr
Match:
XP_022968365.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita maxima])
HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 0
Query: 1 MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
MAG GSSEN D PLCAN+CGFFGNP+TRNLCS+CYT FLKENLISI T+TD SQRRQD
Sbjct: 40 MAGFGSSENPDDSPLCANNCGFFGNPKTRNLCSICYTDFLKENLISIPTETDGVSQRRQD 99
Query: 61 VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
D LK SD E ++VSE+ NPSCSE+DS APAR+NRCGLCNKKVGLLGF CRC
Sbjct: 100 FDDSLK-----SDLESIEVSESEVAMNPSCSETDSNAPARKNRCGLCNKKVGLLGFPCRC 159
Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
GGLFC HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 160 GGLFCRMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 198
BLAST of Lag0019938 vs. NCBI nr
Match:
XP_022945957.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita moschata])
HSP 1 Score: 238.8 bits (608), Expect = 3.3e-59
Identity = 116/164 (70.73%), Postives = 134/164 (81.71%), Query Frame = 0
Query: 1 MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
MAG G SEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1 MAGFGGSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60
Query: 61 VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
D LK SD E ++VSE+ NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61 SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120
Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
GGLFC HRF+++HGC+FD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCHFDTKTVERERLGRQMIEIKGDKLEYRV 159
BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match:
Q5JN07 (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP3 PE=2 SV=2)
HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 0
Query: 4 SGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDED---SQRRQD 63
S + P LCA+ CGF+GNP T ++CSVCY N +++T +
Sbjct: 193 SEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATV 252
Query: 64 VDGLLKSEDLYSDFERLKVSETNAVTNPS-CSESDSKAPARRNRCGLCNKKVGLLGFTCR 123
G + S+ + + ++ NP + + KAPA NRC C KKVGLLGF CR
Sbjct: 253 ATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPA--NRCASCKKKVGLLGFACR 312
Query: 124 CGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
CG +CG HR+ E+H C FD K R+ +A+ N IKGEKL N++
Sbjct: 313 CGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 355
BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match:
Q9SZ69 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 0
Query: 5 GSSENGS------DPPLCANDCGFFGNPETRNLCSVCYTAF-LKENLISISTKTDEDSQR 64
GS EN S +P LC N CGFFG+P NLCS CY + +E+ +++ ++S +
Sbjct: 2 GSEENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLK 61
Query: 65 RQDVDGLLKSEDLYSDFERLKVSETNAVTNPS----CSESDSKAPAR----RNRCGLCNK 124
+ + + + + PS +E D P+R NRC CNK
Sbjct: 62 LPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNK 121
Query: 125 KVGLLGFTCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLE 162
KVG++GF C+CG FCG HR+ E+H C+FD K+V R+ +AK N +K +K++
Sbjct: 122 KVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173
BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match:
Q6Z541 (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP12 PE=2 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 8.8e-23
Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 0
Query: 15 LCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYSDF 74
LC++ CGFFG+ ET N+CS CY LK S+ + + D+ + + +
Sbjct: 80 LCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDITVPI-APATTAPT 139
Query: 75 ERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRFQEEH 134
LK E A + + S + A A+ NRC C KKVGLLGF CRCGG FC HR ++H
Sbjct: 140 PSLKGKEEEAT---AAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKH 199
Query: 135 GCNFDMKKVERERLAKQNLEIKGEKL 161
C FD KK +RE++AK+N I K+
Sbjct: 200 ACTFDFKKSDREKIAKENPLIVAPKI 221
BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match:
O49663 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana OX=3702 GN=SAP9 PE=2 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 3.3e-22
Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 0
Query: 4 SGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENL-ISISTKTDEDSQRRQDVD 63
S + S+P LC CGFFG+P +LCS CY E +++ E S +
Sbjct: 10 SFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPR 69
Query: 64 GLLKSED--LYSDFERLKVSETNAVTNPSCS----ESDSKAPARRNRCGLCNKKVGLLGF 123
L +E + + + K + PS S ++ PAR NRC CNKKVG++GF
Sbjct: 70 SLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGF 129
Query: 124 TCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLE 162
C+CG FCG+HR+ E H C+FD K+V R +AK N +K +K++
Sbjct: 130 KCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174
BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match:
Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 0
Query: 13 PPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYS 72
P LC N+CGFFG+ T N+CS CY F+K ++T +++ + +
Sbjct: 20 PILCVNNCGFFGSSMTNNMCSKCYRDFVK-----VTTMAAPVVEKK----AFTPASSSKT 79
Query: 73 DFERLKVSE--TNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRF 132
E K E AV + ++ K P+ NRC C KKVGL GF CRCGG FC HR+
Sbjct: 80 PLEPAKPDEVPAAAVEDKQAAQEPPKPPS--NRCLSCRKKVGLTGFQCRCGGTFCSTHRY 139
Query: 133 QEEHGCNFDMKKVERERLAKQNLEIKGEKL 161
E H C FD KK R+++AKQN + EK+
Sbjct: 140 TEAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023542516.1 | 1.6e-61 | 73.17 | zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... | [more] |
KAG7013187.1 | 3.0e-60 | 71.95 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [... | [more] |
KAG6574126.1 | 3.9e-60 | 71.95 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [... | [more] |
XP_022968365.1 | 1.9e-59 | 71.95 | zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... | [more] |
XP_022945957.1 | 3.3e-59 | 70.73 | zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... | [more] |
Match Name | E-value | Identity | Description | |
Q5JN07 | 2.1e-24 | 38.18 | Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza s... | [more] |
Q9SZ69 | 5.2e-23 | 35.47 | Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabido... | [more] |
Q6Z541 | 8.8e-23 | 40.41 | Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza ... | [more] |
O49663 | 3.3e-22 | 36.36 | Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabido... | [more] |
Q7Y1W9 | 1.7e-21 | 39.33 | Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza s... | [more] |