Lag0018448 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018448
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 27593153 .. 27597070 (-)
RNA-Seq ExpressionLag0018448
SyntenyLag0018448
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGGATTGGATTGGATTGGATTGGAAATGGATCACCATGTTTGGAAGCCCTGGAATGAGATGGGTTTGGAATTGGTTGGATTCCAATGGGTTTGGAATGGGATTCCAGCCCATTCCCTTGTGGATGCCAACCCATTCCCTTGTCTTCCTCATTTACTCTCTCACTCTCTCTCTCCTTCATAACTCACGACTGAATAGGGCTCTATTTCTTCCTCATTTACTCTCCCTCTGTGTCTCTCTCTCCTTCATAACCCACGACTGAAATCTTCAGAATCTCTTTCTTCCTCATTTACGCGTCTCTGCAACTCCTCTCTGTCCCTTCACATCCTCCATCTTCGAGCAGCCATTTTCTCTTTCCCTCATTACGACCTTCAACGGTCTTAGTAATGGTTGTTCTTGTTGATTCCTTCTTTGCATCCCTTCTCTGGGTTGATGCATGATTCTCTGAGTTAGGGTTTCGCCCTCCACCTCTCAGATCTGAGGTATTTTCGCCGTTTTCGAATTATTTCGGCGGATTTGTGTCGGTGGCGGTGTAATCCCTCTTATTCGCTCGGATCTAAGGTATGTTTGCCATTTTTCGTGAGGTTTCTTGTCGTCTCTTCACCTCCAAATACTTCTGTCCGAGTGGCCGTCGTTTCATGGTGGATCTGCATTGTTCAGTTCGTCTGAGGGTGTTTTTTTTTTGTTTCTCTTTGTGTCCCAGATGCTGTCGGCGAGACACCCTATCGCCGTTTGGCTTCGACGATCTGGCCGCTTGCTGCTTCGTTATCCCCCTTCCTCTCTTTTGCCGCCCCGAAGATGGAGGACTGTCCTCTTGCCGCTTCGAATCTCCTTTCGTCTCTTCGCCGCCTCGAAGATGGAGGACTATTCTCCATGGTCGTTGGGGCTCGCATTTTCATTCTCAGATGCTACACAATCAGTCCACCATTCGACGAGGCCCGGCAGGAGACTGGTTTGGGGATGATAAGCTTGGTAGGGAGGCCGGAACGAGTGAAAAAACAGGTTCGATTAATCGTTTTCTTAAGGCCTATGATGAGGAACCTGTTCCATGATTTTTGTATGATTCTTGTTCATACCTGAGGCCCCTGAGTACCAATACAATTCGTTTTATATTCAGTTGGATTAACGTTGATTACATTCCTAAAGCATGATGATGCGCTACTGATTATCAATTATATTGTTTTGTTTCTGGGAGTATCTTTCCACTGCACAACCGTGTTGTTGTTTTTGTTTATGATTTCGTAAACTGATGTTCAAATCTGAGGCCACCATTCCTGATTTTTTGAGATGCATAGTCCTCGAGGGAAATAGATAGACTGGTTGGAAAACCGATTTTTTGAGATGCATAGGCCTTGTTTTGGATTACTTTTGTTCCGTGACTATCGACTGGCTGGAAGTTGTGTTTTCCTTACTCCATATATCTGTTCAGTAATGACAGATCAGTGGCAATTAATTTTGTTTTTCCTTTTTTTTTGTTTTATTTCATCTGTCTCGTATTTAATGTGGCACTGTTAGGTGGTTGGGTGGATTTTAGTCCTTTCAATATTTATGAAAGTGACTAGTTCCATTTATGCTATGTACTTTGGTGGTTGGGGGACTTAACTGATATGAGCTCTCATTTTCTTCCTTAAATACACAACCCACCCTCATTCACCAATCACCCTTTGCCCTTTCTGTGCAACCATCCACTGCATTCTATCCTATCCCATCTTCACTGTTCGGGTAAGCTTTCCTTCCTACTTTAGTTTGGTTCTTCTCTTTATTATGATTCCTATTCTCACAGACTTGCTGAGCCTATTTATTCCGTTTTTAATTTTTCATGTACTTCGTGAATGACATAACCGAACAATGGTGTATTTAATGGATGCTCCAAACAGTTAACTAGGAGGGATCACGTTACCGGTATGACTGTCCTTAGTTACTAAATAAAGTATGCAATATGCACTCCATGTGTGAATTGTTCTAACTAAGTTCATGTTTGCCACATGTTTAATACATTTTTCGCAGGTTCTCGATCTCCCTCTAGACAAAAAATATACGTCTCACCGATTCACGTAAATACCTCTCTTGTCAACTTCTTTGTTTGTAATATATTTATGTTCATTATATTATGCGTTTCTTTCTTCGAAGAACGCTGTAAATAGGACATTACGTTTATATGATGCATTATTAGTTCTTTTATTTTGCTCATTTGAACTTGTTAATTTTTAAAAAGACTTATTTGATAAAATCTTTTTTTTCCGTTGTTCATTTTTTCATGATATTTTCTTCATTTCGAATTTCCCATTTCTTTGTGTTGGATTTTTGGGTTCAATGTCGTAGTCACATTACTAGTGATTTTGCCGTTCACATTTCCAGTTGATTTGTCACATCATTTTTCATTTAACTAACTTAATAATAATTTTTTCTTTTTGAAAAAAAAGGAGGAAAAACAAACGTAGTAATAAAAATCAAATTTGTTAAATATTTGGAAAATTTATAAAATGAAAGACATAATTACACATTTTTGGACTGTCATATATGACTAAAATTTATAACTATAATTATTTTCAATTTATGTCATTGAACAAAAATTTATAATTATTTACCATTGATCTCATGGAAAAATAAGACTACTTATTTTCTTAACACATGGAACCCCAAAATTAGTCTACTTATTTTCGTAACAGCACTCCATAGTAGCACACAATTATAATTATTAACAGTTTCGAAAAAAATCGGGTTATAAAATTAACAAATTCAGTCAACATACTCCTAAACCATGCATCCACTTCTAAAAAATAGCCTTTCGAAGTGAGTAACGAATTTGAAGTTGTGTGTTTTAAAAAATCTATTTTAAGACTGTTGGTGTGGTTGAAAAAATTATGTTCTACGAAATTTAACTTCTTAGTAGGGGTTTATCTATTACAAAATAATGTGTGTTGAAGGAGAAATTTCGGCCAATCACAAGTTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAGTTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGAAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTCTGGGGGATTCAGATTCGGGGATTCAGCCAGAGACAGAGAGGGCAGAGTCTAGAGCATTCTCCCAAGATCCAGAGTCGTCAAAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGATTTAGAATTCAAAGGATTCAAGACTCAGAAGATTTGAAGACTAGAAGACTCTAAAAAGAGATCAATAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGATCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAACCAACCGATCAAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAACAAGCTAGAGACCAAAGTTTATATATTTAA

mRNA sequence

ATGGGTTTGGATTGGATTGGATTGGATTGGAAATGGATCACCATGTTTGGAAGCCCTGGAATGAGATGGGGTTTCGCCCTCCACCTCTCAGATCTGAGGTATTTTCGCCGTTTTCGAATTATTTCGGCGGATTTGTGTCGGTGGCGGTGTAATCCCTCTTATTCGCTCGGATCTAAGGTATATGCTGTCGGCGAGACACCCTATCGCCGTTTGGCTTCGACGATCTGGCCGCTTGCTGCTTCGTTATCCCCCTTCCTCTCTTTTGCCGCCCCGAAGATGGAGGACTGTCCTCTTGCCGCTTCGAATCTCCTTTCGTCTCTTCGCCGCCTCGAAGATGGAGGACTATTCTCCATGGTCGTTGGGGCTCGCATTTTCATTCTCAGATGCTACACAATCAGTCCACCATTCGACGAGGCCCGGCAGGAGACTGGTTTGGGGATGATAAGCTTGGTAGGGAGGCCGGAACGAGTGAAAAAACAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGATCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAACCAACCGATCAAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAACAAGCTAGAGACCAAAGTTTATATATTTAA

Coding sequence (CDS)

ATGGGTTTGGATTGGATTGGATTGGATTGGAAATGGATCACCATGTTTGGAAGCCCTGGAATGAGATGGGGTTTCGCCCTCCACCTCTCAGATCTGAGGTATTTTCGCCGTTTTCGAATTATTTCGGCGGATTTGTGTCGGTGGCGGTGTAATCCCTCTTATTCGCTCGGATCTAAGGTATATGCTGTCGGCGAGACACCCTATCGCCGTTTGGCTTCGACGATCTGGCCGCTTGCTGCTTCGTTATCCCCCTTCCTCTCTTTTGCCGCCCCGAAGATGGAGGACTGTCCTCTTGCCGCTTCGAATCTCCTTTCGTCTCTTCGCCGCCTCGAAGATGGAGGACTATTCTCCATGGTCGTTGGGGCTCGCATTTTCATTCTCAGATGCTACACAATCAGTCCACCATTCGACGAGGCCCGGCAGGAGACTGGTTTGGGGATGATAAGCTTGGTAGGGAGGCCGGAACGAGTGAAAAAACAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGATCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAACCAACCGATCAAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAACAAGCTAGAGACCAAAGTTTATATATTTAA

Protein sequence

MGLDWIGLDWKWITMFGSPGMRWGFALHLSDLRYFRRFRIISADLCRWRCNPSYSLGSKVYAVGETPYRRLASTIWPLAASLSPFLSFAAPKMEDCPLAASNLLSSLRRLEDGGLFSMVVGARIFILRCYTISPPFDEARQETGLGMISLVGRPERVKKQINKSAGRSSKRINKLTSRSNKSTIQQADPRDQQANRPIKKINKSAGRSSKRSTSQPIDQEDQQVSRPIIQEDQQPTDQTDHQANRPIQEIIKSAGRSSKRINKLTSRSNRSSSQQADPTDHQVSRPIIQEDQQANKSIQEIINLAGRSSKKLNKPAQEDQQARDQSLYI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018448.1Lag0018448.1mRNA